RNA–Protein interactions for RNA: ENST00000530727.5

PTPRC-214, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 1,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-214ENST00000530727 EPB41L4BQ9H329 900 aa5.58□□□□□ -1.52
PTPRC-214ENST00000530727 PRKAG3Q9UGI9 489 aa5.58□□□□□ -1.52
PTPRC-214ENST00000530727 ATP7AQ04656 1500 aa5.58□□□□□ -1.52
PTPRC-214ENST00000530727 POGZQ7Z3K3 1410 aa5.58□□□□□ -1.52
PTPRC-214ENST00000530727 ANKRD34BA5PLL1 514 aa5.58□□□□□ -1.52
PTPRC-214ENST00000530727 GALK1P51570 392 aa5.58□□□□□ -1.52
PTPRC-214ENST00000530727 NCAPHQ15003 741 aa5.58□□□□□ -1.52
PTPRC-214ENST00000530727 SLC43A3Q8NBI5 491 aa5.58□□□□□ -1.52
PTPRC-214ENST00000530727 INTS4Q96HW7 963 aaKnown RBP5.58□□□□□ -1.52
PTPRC-214ENST00000530727 KRTAP9-2Q9BYQ4 174 aa5.58□□□□□ -1.52
PTPRC-214ENST00000530727 ZNF408Q9H9D4 720 aa5.58□□□□□ -1.52
PTPRC-214ENST00000530727 GOLGA2P5Q9HBQ8 144 aa5.58□□□□□ -1.52
PTPRC-214ENST00000530727 DCP1AQ9NPI6 582 aaPredicted RBP5.58□□□□□ -1.52
PTPRC-214ENST00000530727 YBX2Q9Y2T7 364 aaKnown RBP5.58□□□□□ -1.52
PTPRC-214ENST00000530727 TAF6LQ9Y6J9 622 aa5.58□□□□□ -1.52
PTPRC-214ENST00000530727 ZNF518AQ6AHZ1 1483 aa5.57□□□□□ -1.52
PTPRC-214ENST00000530727 MLH3Q9UHC1 1453 aa5.57□□□□□ -1.52
PTPRC-214ENST00000530727 ERBINQ96RT1 1412 aa5.57□□□□□ -1.52
PTPRC-214ENST00000530727 DEPDC5O75140 1603 aa5.57□□□□□ -1.52
PTPRC-214ENST00000530727 FADS2P1A8MWK0 482 aa5.57□□□□□ -1.52
PTPRC-214ENST00000530727 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.57□□□□□ -1.52
PTPRC-214ENST00000530727 NAT2P11245 290 aa5.57□□□□□ -1.52
PTPRC-214ENST00000530727 PKN1Q16512 942 aa5.57□□□□□ -1.52
PTPRC-214ENST00000530727 SDE2Q6IQ49 451 aa5.57□□□□□ -1.52
PTPRC-214ENST00000530727 FAM84AQ96KN4 292 aa5.57□□□□□ -1.52
PTPRC-214ENST00000530727 CGGBP1Q9UFW8 167 aaPredicted RBP5.57□□□□□ -1.52
PTPRC-214ENST00000530727 R3HCC1Q9Y3T6 440 aaKnown RBP5.57□□□□□ -1.52
PTPRC-214ENST00000530727 ANKRD30BQ9BXX2 1392 aa5.57□□□□□ -1.52
PTPRC-214ENST00000530727 IQGAP3Q86VI3 1631 aa5.57□□□□□ -1.52
PTPRC-214ENST00000530727 SPAG9O60271 1321 aaKnown RBP5.57□□□□□ -1.52
PTPRC-214ENST00000530727 FRMPD1Q5SYB0 1578 aa5.57□□□□□ -1.52
PTPRC-214ENST00000530727 NOTOA8MTQ0 251 aa5.56□□□□□ -1.52
PTPRC-214ENST00000530727 CLSTN1O94985 981 aa5.56□□□□□ -1.52
PTPRC-214ENST00000530727 IFNGR1P15260 489 aa5.56□□□□□ -1.52
PTPRC-214ENST00000530727 PDE6BP35913 854 aa5.56□□□□□ -1.52
PTPRC-214ENST00000530727 HSF5Q4G112 596 aaPredicted RBP5.56□□□□□ -1.52
PTPRC-214ENST00000530727 GALNT18Q6P9A2 607 aa5.56□□□□□ -1.52
PTPRC-214ENST00000530727 C6orf15Q6UXA7 325 aaPredicted RBP5.56□□□□□ -1.52
PTPRC-214ENST00000530727 NLRX1Q86UT6 975 aa5.56□□□□□ -1.52
PTPRC-214ENST00000530727 PPP1R14AQ96A00 147 aa5.56□□□□□ -1.52
PTPRC-214ENST00000530727 FCRL3Q96P31 734 aaPredicted RBP5.56□□□□□ -1.52
PTPRC-214ENST00000530727 SIN3AQ96ST3 1273 aa5.56□□□□□ -1.52
PTPRC-214ENST00000530727 APBA2Q99767 749 aa5.56□□□□□ -1.52
PTPRC-214ENST00000530727 PIF1Q9H611 641 aa5.56□□□□□ -1.52
PTPRC-214ENST00000530727 PRDM16Q9HAZ2 1276 aa5.56□□□□□ -1.52
PTPRC-214ENST00000530727 SLC52A1Q9NWF4 448 aa5.56□□□□□ -1.52
PTPRC-214ENST00000530727 SUSD2Q9UGT4 822 aa5.56□□□□□ -1.52
PTPRC-214ENST00000530727 BCORL1Q5H9F3 1711 aa5.56□□□□□ -1.52
PTPRC-214ENST00000530727 TSPOAP1O95153 1857 aa5.56□□□□□ -1.52
PTPRC-214ENST00000530727 WTIPA6NIX2 430 aaPredicted RBP5.56□□□□□ -1.52
PTPRC-214ENST00000530727 VAMP4O75379 141 aa5.56□□□□□ -1.52
PTPRC-214ENST00000530727 C8AP07357 584 aa5.56□□□□□ -1.52
PTPRC-214ENST00000530727 MESP2Q0VG99 397 aa5.56□□□□□ -1.52
PTPRC-214ENST00000530727 DPY19L1Q2PZI1 675 aa5.56□□□□□ -1.52
PTPRC-214ENST00000530727 CYP2R1Q6VVX0 501 aa5.56□□□□□ -1.52
PTPRC-214ENST00000530727 TICAM2Q86XR7 235 aa5.56□□□□□ -1.52
PTPRC-214ENST00000530727 JAMLQ86YT9 394 aa5.56□□□□□ -1.52
PTPRC-214ENST00000530727 IRF2BP1Q8IU81 584 aa5.56□□□□□ -1.52
PTPRC-214ENST00000530727 FBXO15Q8NCQ5 510 aaPredicted RBP5.56□□□□□ -1.52
PTPRC-214ENST00000530727 SHISA4Q96DD7 197 aa5.56□□□□□ -1.52
PTPRC-214ENST00000530727 EIF2AK4Q9P2K8 1649 aaKnown RBP5.56□□□□□ -1.52
PTPRC-214ENST00000530727 VWDEQ8N2E2 1590 aa5.56□□□□□ -1.52
PTPRC-214ENST00000530727 HECW2Q9P2P5 1572 aa5.56□□□□□ -1.52
PTPRC-214ENST00000530727 A0A1W2PQ45 241 aaPredicted RBP5.55□□□□□ -1.52
PTPRC-214ENST00000530727 A0A1W2PQY0 241 aa5.55□□□□□ -1.52
PTPRC-214ENST00000530727 FGF10O15520 208 aaPredicted RBP5.55□□□□□ -1.52
PTPRC-214ENST00000530727 DDAH1O94760 285 aa5.55□□□□□ -1.52
PTPRC-214ENST00000530727 IGBP1P78318 339 aa5.55□□□□□ -1.52
PTPRC-214ENST00000530727 FXNQ16595 210 aa5.55□□□□□ -1.52
PTPRC-214ENST00000530727 PTPROQ16827 1216 aa5.55□□□□□ -1.52
PTPRC-214ENST00000530727 TAF7LQ5H9L4 462 aa5.55□□□□□ -1.52
PTPRC-214ENST00000530727 ADGRF1Q5T601 910 aa5.55□□□□□ -1.52
PTPRC-214ENST00000530727 HLA-DQA1Q5Y7H0 255 aa5.55□□□□□ -1.52
PTPRC-214ENST00000530727 SLCO6A1Q86UG4 719 aa5.55□□□□□ -1.52
PTPRC-214ENST00000530727 FAM178BQ8IXR5 827 aa5.55□□□□□ -1.52
PTPRC-214ENST00000530727 NLGN1Q8N2Q7 840 aa5.55□□□□□ -1.52
PTPRC-214ENST00000530727 ARHGEF39Q8N4T4 335 aa5.55□□□□□ -1.52
PTPRC-214ENST00000530727 CRACR2BQ8N4Y2 399 aaPredicted RBP5.55□□□□□ -1.52
PTPRC-214ENST00000530727 PMFBP1Q8TBY8 1022 aa5.55□□□□□ -1.52
PTPRC-214ENST00000530727 RCC1LQ96I51 464 aaKnown RBP5.55□□□□□ -1.52
PTPRC-214ENST00000530727 GMLQ99445 158 aa5.55□□□□□ -1.52
PTPRC-214ENST00000530727 PLCD4Q9BRC7 762 aa5.55□□□□□ -1.52
PTPRC-214ENST00000530727 MYH16Q9H6N6 1097 aa5.55□□□□□ -1.52
PTPRC-214ENST00000530727 ZSWIM4Q9H7M6 989 aa5.55□□□□□ -1.52
PTPRC-214ENST00000530727 CRTAC1Q9NQ79 661 aa5.55□□□□□ -1.52
PTPRC-214ENST00000530727 KLHL42Q9P2K6 505 aa5.55□□□□□ -1.52
PTPRC-214ENST00000530727 APEX2Q9UBZ4 518 aa5.55□□□□□ -1.52
PTPRC-214ENST00000530727 AKT3Q9Y243 479 aa5.55□□□□□ -1.52
PTPRC-214ENST00000530727 TBX22Q9Y458 520 aa5.55□□□□□ -1.52
PTPRC-214ENST00000530727 MROH1Q8NDA8 1641 aa5.55□□□□□ -1.52
PTPRC-214ENST00000530727 DHX29Q7Z478 1369 aaKnown RBP5.55□□□□□ -1.52
PTPRC-214ENST00000530727 ZMYM4Q5VZL5 1548 aa5.55□□□□□ -1.52
PTPRC-214ENST00000530727 FAM135AQ9P2D6 1515 aa5.55□□□□□ -1.52
PTPRC-214ENST00000530727 ABCA6Q8N139 1617 aa5.55□□□□□ -1.52
PTPRC-214ENST00000530727 hCG_2014768A0A024R1R8 64 aa5.55□□□□□ -1.52
PTPRC-214ENST00000530727 KRTAP9-6A0A140TA67 174 aa5.55□□□□□ -1.52
PTPRC-214ENST00000530727 A0A1W2PQ27 194 aa5.55□□□□□ -1.52
PTPRC-214ENST00000530727 A0A1W2PQ64 194 aa5.55□□□□□ -1.52
PTPRC-214ENST00000530727 A0A1W2PQC6 194 aa5.55□□□□□ -1.52
PTPRC-214ENST00000530727 A0A1W2PQD8 194 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms