RNA–Protein interactions for RNA: ENST00000530516.1

NUP98-218, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 391 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-218ENST00000530516 GMLQ99445 158 aa4.9□□□□□ -1.63
NUP98-218ENST00000530516 CGGBP1Q9UFW8 167 aaPredicted RBP4.9□□□□□ -1.63
NUP98-218ENST00000530516 PRKAG3Q9UGI9 489 aa4.9□□□□□ -1.63
NUP98-218ENST00000530516 TRBV23OR9-2A0A075B6M9 112 aa4.89□□□□□ -1.63
NUP98-218ENST00000530516 PRICKLE3O43900 615 aaPredicted RBP4.89□□□□□ -1.63
NUP98-218ENST00000530516 VAMP4O75379 141 aa4.89□□□□□ -1.63
NUP98-218ENST00000530516 SSBP05455 408 aaKnown RBP eCLIP4.89□□□□□ -1.63
NUP98-218ENST00000530516 CD3EP07766 207 aa4.89□□□□□ -1.63
NUP98-218ENST00000530516 DNAJA1P31689 397 aaKnown RBP4.89□□□□□ -1.63
NUP98-218ENST00000530516 ARID5AQ03989 594 aa4.89□□□□□ -1.63
NUP98-218ENST00000530516 GNL2Q13823 731 aaKnown RBP4.89□□□□□ -1.63
NUP98-218ENST00000530516 MRM1Q6IN84 353 aaKnown RBP4.89□□□□□ -1.63
NUP98-218ENST00000530516 C6orf15Q6UXA7 325 aaPredicted RBP4.89□□□□□ -1.63
NUP98-218ENST00000530516 VPS37DQ86XT2 251 aa4.89□□□□□ -1.63
NUP98-218ENST00000530516 CARFQ8N187 725 aa4.89□□□□□ -1.63
NUP98-218ENST00000530516 TTC9BQ8N6N2 239 aa4.89□□□□□ -1.63
NUP98-218ENST00000530516 SLC43A3Q8NBI5 491 aa4.89□□□□□ -1.63
NUP98-218ENST00000530516 ALG3Q92685 438 aa4.89□□□□□ -1.63
NUP98-218ENST00000530516 RCC1LQ96I51 464 aaKnown RBP4.89□□□□□ -1.63
NUP98-218ENST00000530516 LGR4Q9BXB1 951 aa4.89□□□□□ -1.63
NUP98-218ENST00000530516 KRTAP9-8Q9BYQ0 159 aa4.89□□□□□ -1.63
NUP98-218ENST00000530516 GBP3Q9H0R5 595 aa4.89□□□□□ -1.63
NUP98-218ENST00000530516 ACTR10Q9NZ32 417 aa4.89□□□□□ -1.63
NUP98-218ENST00000530516 NTMQ9P121 344 aa4.89□□□□□ -1.63
NUP98-218ENST00000530516 ANKRD34BA5PLL1 514 aa4.88□□□□□ -1.63
NUP98-218ENST00000530516 AURKAO14965 403 aa4.88□□□□□ -1.63
NUP98-218ENST00000530516 PPM1BO75688 479 aa4.88□□□□□ -1.63
NUP98-218ENST00000530516 PLA2G1BP04054 148 aaKnown RBP4.88□□□□□ -1.63
NUP98-218ENST00000530516 ASGR2P07307 311 aa4.88□□□□□ -1.63
NUP98-218ENST00000530516 GLI4P10075 376 aa4.88□□□□□ -1.63
NUP98-218ENST00000530516 ATF2P15336 505 aa4.88□□□□□ -1.63
NUP98-218ENST00000530516 MAGEA10P43363 369 aaPredicted RBP4.88□□□□□ -1.63
NUP98-218ENST00000530516 TTLL7Q6ZT98 887 aa4.88□□□□□ -1.63
NUP98-218ENST00000530516 SPATA25Q9BR10 227 aa4.88□□□□□ -1.63
NUP98-218ENST00000530516 STXBP3O00186 592 aa4.87□□□□□ -1.63
NUP98-218ENST00000530516 NOBOXO60393 691 aa4.87□□□□□ -1.63
NUP98-218ENST00000530516 ITGB3P05106 788 aa4.87□□□□□ -1.63
NUP98-218ENST00000530516 INSRRP14616 1297 aa4.87□□□□□ -1.63
NUP98-218ENST00000530516 CYP4F3Q08477 520 aa4.87□□□□□ -1.63
NUP98-218ENST00000530516 NCAPHQ15003 741 aa4.87□□□□□ -1.63
NUP98-218ENST00000530516 DPY19L1Q2PZI1 675 aa4.87□□□□□ -1.63
NUP98-218ENST00000530516 TNNI3KQ59H18 835 aa4.87□□□□□ -1.63
NUP98-218ENST00000530516 LARP1BQ659C4 914 aaKnown RBP4.87□□□□□ -1.63
NUP98-218ENST00000530516 ADAT2Q7Z6V5 191 aaKnown RBP4.87□□□□□ -1.63
NUP98-218ENST00000530516 FAM178BQ8IXR5 827 aa4.87□□□□□ -1.63
NUP98-218ENST00000530516 CELF2-AS1Q8N7Q2 184 aa4.87□□□□□ -1.63
NUP98-218ENST00000530516 LNPKQ9C0E8 428 aa4.87□□□□□ -1.63
NUP98-218ENST00000530516 EMC9Q9Y3B6 208 aa4.87□□□□□ -1.63
NUP98-218ENST00000530516 C1QTNF3-AMACRE9PGA6 284 aa4.86□□□□□ -1.63
NUP98-218ENST00000530516 TBX1O43435 398 aa4.86□□□□□ -1.63
NUP98-218ENST00000530516 SARSP49591 514 aaKnown RBP4.86□□□□□ -1.63
NUP98-218ENST00000530516 ZNF143P52747 638 aaPredicted RBP4.86□□□□□ -1.63
NUP98-218ENST00000530516 DLX2Q07687 328 aaPredicted RBP4.86□□□□□ -1.63
NUP98-218ENST00000530516 CACNB2Q08289 660 aaPredicted RBP4.86□□□□□ -1.63
NUP98-218ENST00000530516 GRB10Q13322 594 aa4.86□□□□□ -1.63
NUP98-218ENST00000530516 PUM1Q14671 1186 aaKnown RBP eCLIP4.86□□□□□ -1.63
NUP98-218ENST00000530516 LZTR1Q8N653 840 aa4.86□□□□□ -1.63
NUP98-218ENST00000530516 ZNF526Q8TF50 670 aaPredicted RBP4.86□□□□□ -1.63
NUP98-218ENST00000530516 HNRNPLLQ8WVV9 542 aaKnown RBP4.86□□□□□ -1.63
NUP98-218ENST00000530516 MRGPRX3Q96LB0 322 aa4.86□□□□□ -1.63
NUP98-218ENST00000530516 SAMD11Q96NU1 681 aa4.86□□□□□ -1.63
NUP98-218ENST00000530516 SMPD4Q9NXE4 827 aa4.86□□□□□ -1.63
NUP98-218ENST00000530516 SUGT1Q9Y2Z0 365 aa4.86□□□□□ -1.63
NUP98-218ENST00000530516 KLF4O43474 513 aa4.85□□□□□ -1.63
NUP98-218ENST00000530516 SMARCA5O60264 1052 aaPredicted RBP4.85□□□□□ -1.63
NUP98-218ENST00000530516 SUSD5O60279 629 aa4.85□□□□□ -1.63
NUP98-218ENST00000530516 GJB6O95452 261 aa4.85□□□□□ -1.63
NUP98-218ENST00000530516 TACR1P25103 407 aa4.85□□□□□ -1.63
NUP98-218ENST00000530516 PMLP29590 882 aa4.85□□□□□ -1.63
NUP98-218ENST00000530516 CNR2P34972 360 aa4.85□□□□□ -1.63
NUP98-218ENST00000530516 ADAM17P78536 824 aa4.85□□□□□ -1.63
NUP98-218ENST00000530516 KIAA2012Q0VF49 1180 aa4.85□□□□□ -1.63
NUP98-218ENST00000530516 BVESQ8NE79 360 aa4.85□□□□□ -1.63
NUP98-218ENST00000530516 FBLN5Q9UBX5 448 aa4.85□□□□□ -1.63
NUP98-218ENST00000530516 AKT3Q9Y243 479 aa4.85□□□□□ -1.63
NUP98-218ENST00000530516 BACE2Q9Y5Z0 518 aa4.85□□□□□ -1.63
NUP98-218ENST00000530516 HCFC2Q9Y5Z7 792 aa4.85□□□□□ -1.63
NUP98-218ENST00000530516 A0A1B0GTL3 188 aa4.84□□□□□ -1.63
NUP98-218ENST00000530516 C2orf71A6NGG8 1288 aa4.84□□□□□ -1.63
NUP98-218ENST00000530516 KCNH1O95259 989 aa4.84□□□□□ -1.63
NUP98-218ENST00000530516 CAPNS1P04632 268 aa4.84□□□□□ -1.63
NUP98-218ENST00000530516 SEPHS1P49903 392 aa4.84□□□□□ -1.63
NUP98-218ENST00000530516 ZC3H6P61129 1189 aaKnown RBP4.84□□□□□ -1.63
NUP98-218ENST00000530516 AMPD2Q01433 879 aa4.84□□□□□ -1.63
NUP98-218ENST00000530516 NAALADL2Q58DX5 795 aa4.84□□□□□ -1.63
NUP98-218ENST00000530516 MBLAC2Q68D91 279 aa4.84□□□□□ -1.63
NUP98-218ENST00000530516 GTF2IRD2BQ6EKJ0 949 aa4.84□□□□□ -1.63
NUP98-218ENST00000530516 GTF2IRD2Q86UP8 949 aa4.84□□□□□ -1.63
NUP98-218ENST00000530516 FERMT3Q86UX7 667 aa4.84□□□□□ -1.63
NUP98-218ENST00000530516 FAM124AQ86V42 546 aa4.84□□□□□ -1.63
NUP98-218ENST00000530516 TRIM59Q8IWR1 403 aa4.84□□□□□ -1.63
NUP98-218ENST00000530516 LINC00482Q8N8I6 264 aa4.84□□□□□ -1.63
NUP98-218ENST00000530516 SMARCC2Q8TAQ2 1214 aa4.84□□□□□ -1.63
NUP98-218ENST00000530516 COPS5Q92905 334 aa4.84□□□□□ -1.63
NUP98-218ENST00000530516 APBA2Q99767 749 aa4.84□□□□□ -1.63
NUP98-218ENST00000530516 C1QTNF3Q9BXJ4 246 aa4.84□□□□□ -1.63
NUP98-218ENST00000530516 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.84□□□□□ -1.63
NUP98-218ENST00000530516 PPP1R11O60927 126 aaPredicted RBP4.83□□□□□ -1.64
NUP98-218ENST00000530516 DDAH1O94760 285 aa4.83□□□□□ -1.64
NUP98-218ENST00000530516 PLATP00750 562 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms