RNA–Protein interactions for RNA: ENST00000526639.2

SNRNP35-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP35, Length 1,975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-203ENST00000526639 VTI1AQ96AJ9 217 aa12.89□□□□□ -0.35
SNRNP35-203ENST00000526639 RMDN3Q96TC7 470 aa12.89□□□□□ -0.35
SNRNP35-203ENST00000526639 WDR11Q9BZH6 1224 aa12.89□□□□□ -0.35
SNRNP35-203ENST00000526639 UPF2Q9HAU5 1272 aaKnown RBP12.89□□□□□ -0.35
SNRNP35-203ENST00000526639 STARD7Q9NQZ5 370 aa12.89□□□□□ -0.35
SNRNP35-203ENST00000526639 hCG_1642624A0A1W2PR95 340 aa12.89□□□□□ -0.35
SNRNP35-203ENST00000526639 EIF2AK2P19525 551 aaKnown RBP12.89□□□□□ -0.35
SNRNP35-203ENST00000526639 EDNRBP24530 442 aa12.89□□□□□ -0.35
SNRNP35-203ENST00000526639 HSPA4P34932 840 aa12.89□□□□□ -0.35
SNRNP35-203ENST00000526639 MDM2Q00987 491 aaPredicted RBP12.89□□□□□ -0.35
SNRNP35-203ENST00000526639 MAP3K14Q99558 947 aa12.89□□□□□ -0.35
SNRNP35-203ENST00000526639 TSEN34Q9BSV6 310 aaKnown RBP12.89□□□□□ -0.35
SNRNP35-203ENST00000526639 PRDM5Q9NQX1 630 aaPredicted RBP12.89□□□□□ -0.35
SNRNP35-203ENST00000526639 MOXD2PA6NHM9 499 aa12.88□□□□□ -0.35
SNRNP35-203ENST00000526639 REC8O95072 547 aa12.88□□□□□ -0.35
SNRNP35-203ENST00000526639 CST5P28325 142 aaPredicted RBP12.88□□□□□ -0.35
SNRNP35-203ENST00000526639 MAGEA10P43363 369 aaPredicted RBP12.88□□□□□ -0.35
SNRNP35-203ENST00000526639 KRT32Q14532 448 aa12.88□□□□□ -0.35
SNRNP35-203ENST00000526639 ARHGEF16Q5VV41 709 aa12.88□□□□□ -0.35
SNRNP35-203ENST00000526639 SGMS1Q86VZ5 419 aa12.88□□□□□ -0.35
SNRNP35-203ENST00000526639 FANCBQ8NB91 859 aa12.88□□□□□ -0.35
SNRNP35-203ENST00000526639 PCSK9Q8NBP7 692 aaKnown RBP12.88□□□□□ -0.35
SNRNP35-203ENST00000526639 NSUN6Q8TEA1 469 aaKnown RBP12.88□□□□□ -0.35
SNRNP35-203ENST00000526639 GLT1D1Q96MS3 346 aa12.88□□□□□ -0.35
SNRNP35-203ENST00000526639 MPHOSPH6Q99547 160 aaKnown RBP12.88□□□□□ -0.35
SNRNP35-203ENST00000526639 AP5M1Q9H0R1 490 aa12.88□□□□□ -0.35
SNRNP35-203ENST00000526639 UPF3AQ9H1J1 476 aaKnown RBP12.88□□□□□ -0.35
SNRNP35-203ENST00000526639 BRPF3Q9ULD4 1205 aa12.88□□□□□ -0.35
SNRNP35-203ENST00000526639 SNX14Q9Y5W7 946 aa12.88□□□□□ -0.35
SNRNP35-203ENST00000526639 LRRC37A2A6NM11 1700 aa12.88□□□□□ -0.35
SNRNP35-203ENST00000526639 LOC102724159A0A0B4J2E5 919 aa12.87□□□□□ -0.35
SNRNP35-203ENST00000526639 PQBP1O60828 265 aaKnown RBP12.87□□□□□ -0.35
SNRNP35-203ENST00000526639 TLE2Q04725 743 aa12.87□□□□□ -0.35
SNRNP35-203ENST00000526639 SNX17Q15036 470 aa12.87□□□□□ -0.35
SNRNP35-203ENST00000526639 PWP2Q15269 919 aaKnown RBP12.87□□□□□ -0.35
SNRNP35-203ENST00000526639 DUSP28Q4G0W2 176 aa12.87□□□□□ -0.35
SNRNP35-203ENST00000526639 CXCL17Q6UXB2 119 aa12.87□□□□□ -0.35
SNRNP35-203ENST00000526639 SH3RF1Q7Z6J0 888 aa12.87□□□□□ -0.35
SNRNP35-203ENST00000526639 RRP36Q96EU6 259 aaKnown RBP12.87□□□□□ -0.35
SNRNP35-203ENST00000526639 JAKMIP1Q96N16 626 aaKnown RBP12.87□□□□□ -0.35
SNRNP35-203ENST00000526639 GDF15Q99988 308 aa12.87□□□□□ -0.35
SNRNP35-203ENST00000526639 SPZ1Q9BXG8 430 aa12.87□□□□□ -0.35
SNRNP35-203ENST00000526639 PRO3102Q9H379 93 aa12.87□□□□□ -0.35
SNRNP35-203ENST00000526639 B4DLN1 442 aa12.87□□□□□ -0.35
SNRNP35-203ENST00000526639 CALM1P0DP23 149 aa12.87□□□□□ -0.35
SNRNP35-203ENST00000526639 CALM2P0DP24 149 aa12.87□□□□□ -0.35
SNRNP35-203ENST00000526639 CALM3P0DP25 149 aa12.87□□□□□ -0.35
SNRNP35-203ENST00000526639 HSD17B4P51659 736 aa12.87□□□□□ -0.35
SNRNP35-203ENST00000526639 MRPL12P52815 198 aaKnown RBP12.87□□□□□ -0.35
SNRNP35-203ENST00000526639 FGD1P98174 961 aa12.87□□□□□ -0.35
SNRNP35-203ENST00000526639 FSCN1Q16658 493 aaKnown RBP12.87□□□□□ -0.35
SNRNP35-203ENST00000526639 C1orf53Q5VUE5 145 aa12.87□□□□□ -0.35
SNRNP35-203ENST00000526639 APOA5Q6Q788 366 aa12.87□□□□□ -0.35
SNRNP35-203ENST00000526639 SYNE3Q6ZMZ3 975 aa12.87□□□□□ -0.35
SNRNP35-203ENST00000526639 SEPT14Q6ZU15 432 aa12.87□□□□□ -0.35
SNRNP35-203ENST00000526639 FCHSD1Q86WN1 690 aa12.87□□□□□ -0.35
SNRNP35-203ENST00000526639 COPS5Q92905 334 aa12.87□□□□□ -0.35
SNRNP35-203ENST00000526639 ZFP91Q96JP5 570 aaPredicted RBP12.87□□□□□ -0.35
SNRNP35-203ENST00000526639 TBC1D32Q96NH3 1257 aa12.87□□□□□ -0.35
SNRNP35-203ENST00000526639 PXMP2Q9NR77 195 aa12.87□□□□□ -0.35
SNRNP35-203ENST00000526639 PRKAG2Q9UGJ0 569 aa12.87□□□□□ -0.35
SNRNP35-203ENST00000526639 SEC63Q9UGP8 760 aaKnown RBP12.87□□□□□ -0.35
SNRNP35-203ENST00000526639 NAP1L2Q9ULW6 460 aaPredicted RBP12.87□□□□□ -0.35
SNRNP35-203ENST00000526639 ARIH2O95376 493 aa12.86□□□□□ -0.35
SNRNP35-203ENST00000526639 TXNP10599 105 aaKnown RBP12.86□□□□□ -0.35
SNRNP35-203ENST00000526639 PPP2R5BQ15173 497 aa12.86□□□□□ -0.35
SNRNP35-203ENST00000526639 KCNB2Q92953 911 aa12.86□□□□□ -0.35
SNRNP35-203ENST00000526639 RBM47A0AV96 593 aaKnown RBP12.85□□□□□ -0.35
SNRNP35-203ENST00000526639 TRIM43BA6NCK2 446 aa12.85□□□□□ -0.35
SNRNP35-203ENST00000526639 GCOM1H8Y6P7 765 aaPredicted RBP12.85□□□□□ -0.35
SNRNP35-203ENST00000526639 NR3C2P08235 984 aa12.85□□□□□ -0.35
SNRNP35-203ENST00000526639 HMGB1P09429 215 aaKnown RBP12.85□□□□□ -0.35
SNRNP35-203ENST00000526639 POLR2MP0CAP2 368 aa12.85□□□□□ -0.35
SNRNP35-203ENST00000526639 MYCLP12524 364 aaPredicted RBP12.85□□□□□ -0.35
SNRNP35-203ENST00000526639 GNAQP50148 359 aa12.85□□□□□ -0.35
SNRNP35-203ENST00000526639 STXBP2Q15833 593 aa12.85□□□□□ -0.35
SNRNP35-203ENST00000526639 LY6KQ17RY6 165 aa12.85□□□□□ -0.35
SNRNP35-203ENST00000526639 SCFD2Q8WU76 684 aa12.85□□□□□ -0.35
SNRNP35-203ENST00000526639 TRIM43Q96BQ3 446 aaPredicted RBP12.85□□□□□ -0.35
SNRNP35-203ENST00000526639 LZTS2Q9BRK4 669 aa12.85□□□□□ -0.35
SNRNP35-203ENST00000526639 C22orf23Q9BZE7 217 aa12.85□□□□□ -0.35
SNRNP35-203ENST00000526639 PDLIM7Q9NR12 457 aa12.85□□□□□ -0.35
SNRNP35-203ENST00000526639 Q9Y3F1 56 aa12.85□□□□□ -0.35
SNRNP35-203ENST00000526639 KLF18A0A0U1RQI7 1052 aa12.85□□□□□ -0.35
SNRNP35-203ENST00000526639 ZBTB43O43298 467 aa12.85□□□□□ -0.35
SNRNP35-203ENST00000526639 CASTP20810 708 aaKnown RBP12.85□□□□□ -0.35
SNRNP35-203ENST00000526639 SMARCA1P28370 1054 aa12.85□□□□□ -0.35
SNRNP35-203ENST00000526639 NKX3-2P78367 333 aa12.85□□□□□ -0.35
SNRNP35-203ENST00000526639 TRAF1Q13077 416 aa12.85□□□□□ -0.35
SNRNP35-203ENST00000526639 USP17L6PQ6QN14 398 aa12.85□□□□□ -0.35
SNRNP35-203ENST00000526639 BLOC1S2Q6QNY1 142 aa12.85□□□□□ -0.35
SNRNP35-203ENST00000526639 Q6ZUG5 572 aa12.85□□□□□ -0.35
SNRNP35-203ENST00000526639 TMTC3Q6ZXV5 915 aa12.85□□□□□ -0.35
SNRNP35-203ENST00000526639 OR6J1Q8NGC5 347 aa12.85□□□□□ -0.35
SNRNP35-203ENST00000526639 IWS1Q96ST2 819 aa12.85□□□□□ -0.35
SNRNP35-203ENST00000526639 MAF1Q9H063 256 aa12.85□□□□□ -0.35
SNRNP35-203ENST00000526639 ELP1O95163 1332 aa12.85□□□□□ -0.35
SNRNP35-203ENST00000526639 ITGB8P26012 769 aa12.84□□□□□ -0.35
SNRNP35-203ENST00000526639 FXR1P51114 621 aaKnown RBP eCLIP12.84□□□□□ -0.35
SNRNP35-203ENST00000526639 PSMC6P62333 389 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms