RNA–Protein interactions for RNA: ENST00000525745.5

ECHDC1-218, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-218ENST00000525745 FUCA1P04066 466 aa4.25□□□□□ -1.73
ECHDC1-218ENST00000525745 NTRK1P04629 796 aa4.25□□□□□ -1.73
ECHDC1-218ENST00000525745 PLS3P13797 630 aa4.25□□□□□ -1.73
ECHDC1-218ENST00000525745 CASP7P55210 303 aa4.25□□□□□ -1.73
ECHDC1-218ENST00000525745 HTRA3P83110 453 aa4.25□□□□□ -1.73
ECHDC1-218ENST00000525745 PLP2Q04941 152 aa4.25□□□□□ -1.73
ECHDC1-218ENST00000525745 SCRN1Q12765 414 aa4.25□□□□□ -1.73
ECHDC1-218ENST00000525745 SLC9A5Q14940 896 aa4.25□□□□□ -1.73
ECHDC1-218ENST00000525745 RTP5Q14D33 572 aa4.25□□□□□ -1.73
ECHDC1-218ENST00000525745 UBXN11Q5T124 520 aa4.25□□□□□ -1.73
ECHDC1-218ENST00000525745 CRACR2BQ8N4Y2 399 aaPredicted RBP4.25□□□□□ -1.73
ECHDC1-218ENST00000525745 NOX5Q96PH1 765 aa4.25□□□□□ -1.73
ECHDC1-218ENST00000525745 MARCH2Q9P0N8 246 aa4.25□□□□□ -1.73
ECHDC1-218ENST00000525745 INPP5FQ9Y2H2 1132 aa4.25□□□□□ -1.73
ECHDC1-218ENST00000525745 SIT1Q9Y3P8 196 aa4.25□□□□□ -1.73
ECHDC1-218ENST00000525745 SH3D21A4FU49 640 aa4.24□□□□□ -1.73
ECHDC1-218ENST00000525745 NOP56O00567 594 aaKnown RBP4.24□□□□□ -1.73
ECHDC1-218ENST00000525745 ZBTB7AO95365 584 aa4.24□□□□□ -1.73
ECHDC1-218ENST00000525745 NAT2P11245 290 aa4.24□□□□□ -1.73
ECHDC1-218ENST00000525745 MBLAC2Q68D91 279 aa4.24□□□□□ -1.73
ECHDC1-218ENST00000525745 POMZP3Q6PJE2 187 aa4.24□□□□□ -1.73
ECHDC1-218ENST00000525745 FERMT3Q86UX7 667 aa4.24□□□□□ -1.73
ECHDC1-218ENST00000525745 ZNF513Q8N8E2 541 aaPredicted RBP4.24□□□□□ -1.73
ECHDC1-218ENST00000525745 BVESQ8NE79 360 aa4.24□□□□□ -1.73
ECHDC1-218ENST00000525745 ZBTB8AQ96BR9 441 aa4.24□□□□□ -1.73
ECHDC1-218ENST00000525745 DDX11Q96FC9 970 aa4.24□□□□□ -1.73
ECHDC1-218ENST00000525745 SEC16BQ96JE7 1060 aa4.24□□□□□ -1.73
ECHDC1-218ENST00000525745 APBA2Q99767 749 aa4.24□□□□□ -1.73
ECHDC1-218ENST00000525745 LGR4Q9BXB1 951 aa4.24□□□□□ -1.73
ECHDC1-218ENST00000525745 ACBD3Q9H3P7 528 aa4.24□□□□□ -1.73
ECHDC1-218ENST00000525745 CCSER2Q9H7U1 834 aa4.24□□□□□ -1.73
ECHDC1-218ENST00000525745 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.24□□□□□ -1.73
ECHDC1-218ENST00000525745 EMC9Q9Y3B6 208 aa4.24□□□□□ -1.73
ECHDC1-218ENST00000525745 THBDP07204 575 aa4.23□□□□□ -1.73
ECHDC1-218ENST00000525745 CYP2C8P10632 490 aa4.23□□□□□ -1.73
ECHDC1-218ENST00000525745 RANGAP1P46060 587 aaPredicted RBP4.23□□□□□ -1.73
ECHDC1-218ENST00000525745 GJA9P57773 515 aa4.23□□□□□ -1.73
ECHDC1-218ENST00000525745 DLX2Q07687 328 aaPredicted RBP4.23□□□□□ -1.73
ECHDC1-218ENST00000525745 CACNB2Q08289 660 aaPredicted RBP4.23□□□□□ -1.73
ECHDC1-218ENST00000525745 SMAD4Q13485 552 aaKnown RBP4.23□□□□□ -1.73
ECHDC1-218ENST00000525745 DCP2Q8IU60 420 aaKnown RBP4.23□□□□□ -1.73
ECHDC1-218ENST00000525745 TEX2Q8IWB9 1127 aa4.23□□□□□ -1.73
ECHDC1-218ENST00000525745 CARFQ8N187 725 aa4.23□□□□□ -1.73
ECHDC1-218ENST00000525745 CPA5Q8WXQ8 436 aa4.23□□□□□ -1.73
ECHDC1-218ENST00000525745 DDX1Q92499 740 aaKnown RBP4.23□□□□□ -1.73
ECHDC1-218ENST00000525745 COPS5Q92905 334 aa4.23□□□□□ -1.73
ECHDC1-218ENST00000525745 AP5M1Q9H0R1 490 aa4.23□□□□□ -1.73
ECHDC1-218ENST00000525745 NTMQ9P121 344 aa4.23□□□□□ -1.73
ECHDC1-218ENST00000525745 STRIP2Q9ULQ0 834 aa4.23□□□□□ -1.73
ECHDC1-218ENST00000525745 ADRB1P08588 477 aa4.22□□□□□ -1.73
ECHDC1-218ENST00000525745 SARSP49591 514 aaKnown RBP4.22□□□□□ -1.73
ECHDC1-218ENST00000525745 NCAPHQ15003 741 aa4.22□□□□□ -1.73
ECHDC1-218ENST00000525745 GTF2IRD2BQ6EKJ0 949 aa4.22□□□□□ -1.73
ECHDC1-218ENST00000525745 DBX2Q6ZNG2 339 aa4.22□□□□□ -1.73
ECHDC1-218ENST00000525745 GTF2IRD2Q86UP8 949 aa4.22□□□□□ -1.73
ECHDC1-218ENST00000525745 PLEKHO2Q8TD55 490 aa4.22□□□□□ -1.73
ECHDC1-218ENST00000525745 DPF3Q92784 378 aa4.22□□□□□ -1.73
ECHDC1-218ENST00000525745 MMP19Q99542 508 aa4.22□□□□□ -1.73
ECHDC1-218ENST00000525745 KRTAP4-5Q9BYR2 181 aa4.22□□□□□ -1.73
ECHDC1-218ENST00000525745 TGIF2Q9GZN2 237 aa4.22□□□□□ -1.73
ECHDC1-218ENST00000525745 JAG2Q9Y219 1238 aa4.22□□□□□ -1.73
ECHDC1-218ENST00000525745 MRVI1Q9Y6F6 885 aa4.22□□□□□ -1.73
ECHDC1-218ENST00000525745 C22orf46C9J442 243 aa4.21□□□□□ -1.74
ECHDC1-218ENST00000525745 SMARCA5O60264 1052 aaPredicted RBP4.21□□□□□ -1.74
ECHDC1-218ENST00000525745 NOBOXO60393 691 aa4.21□□□□□ -1.74
ECHDC1-218ENST00000525745 C8BP07358 591 aa4.21□□□□□ -1.74
ECHDC1-218ENST00000525745 CNR2P34972 360 aa4.21□□□□□ -1.74
ECHDC1-218ENST00000525745 ZNF143P52747 638 aaPredicted RBP4.21□□□□□ -1.74
ECHDC1-218ENST00000525745 KRTAP10-2P60368 255 aa4.21□□□□□ -1.74
ECHDC1-218ENST00000525745 RBM10P98175 930 aaKnown RBP4.21□□□□□ -1.74
ECHDC1-218ENST00000525745 NFKB2Q00653 900 aa4.21□□□□□ -1.74
ECHDC1-218ENST00000525745 INF2Q27J81 1249 aa4.21□□□□□ -1.74
ECHDC1-218ENST00000525745 ZFYVE27Q5T4F4 411 aa4.21□□□□□ -1.74
ECHDC1-218ENST00000525745 LARP1BQ659C4 914 aaKnown RBP4.21□□□□□ -1.74
ECHDC1-218ENST00000525745 ETV3LQ6ZN32 361 aa4.21□□□□□ -1.74
ECHDC1-218ENST00000525745 TTLL7Q6ZT98 887 aa4.21□□□□□ -1.74
ECHDC1-218ENST00000525745 TRIM59Q8IWR1 403 aa4.21□□□□□ -1.74
ECHDC1-218ENST00000525745 BTN2A2Q8WVV5 523 aa4.21□□□□□ -1.74
ECHDC1-218ENST00000525745 SYT3Q9BQG1 590 aa4.21□□□□□ -1.74
ECHDC1-218ENST00000525745 NKX2-4Q9H2Z4 354 aa4.21□□□□□ -1.74
ECHDC1-218ENST00000525745 CYP26B1Q9NR63 512 aa4.21□□□□□ -1.74
ECHDC1-218ENST00000525745 SPATA6Q9NWH7 488 aaPredicted RBP4.21□□□□□ -1.74
ECHDC1-218ENST00000525745 LRP2BPQ9P2M1 347 aa4.21□□□□□ -1.74
ECHDC1-218ENST00000525745 DUSP10Q9Y6W6 482 aa4.21□□□□□ -1.74
ECHDC1-218ENST00000525745 K7ESM1 405 aa4.2□□□□□ -1.74
ECHDC1-218ENST00000525745 SMAD7O15105 426 aaKnown RBP4.2□□□□□ -1.74
ECHDC1-218ENST00000525745 TCF3P15923 654 aa4.2□□□□□ -1.74
ECHDC1-218ENST00000525745 ATF4P18848 351 aaPredicted RBP4.2□□□□□ -1.74
ECHDC1-218ENST00000525745 FPR2P25090 351 aa4.2□□□□□ -1.74
ECHDC1-218ENST00000525745 ERCC5P28715 1186 aaPredicted RBP4.2□□□□□ -1.74
ECHDC1-218ENST00000525745 ECI1P42126 302 aa4.2□□□□□ -1.74
ECHDC1-218ENST00000525745 RPL11P62913 178 aaKnown RBP4.2□□□□□ -1.74
ECHDC1-218ENST00000525745 SPATS1Q496A3 300 aa4.2□□□□□ -1.74
ECHDC1-218ENST00000525745 SV2CQ496J9 727 aa4.2□□□□□ -1.74
ECHDC1-218ENST00000525745 C6orf15Q6UXA7 325 aaPredicted RBP4.2□□□□□ -1.74
ECHDC1-218ENST00000525745 CD300LDQ6UXZ3 194 aa4.2□□□□□ -1.74
ECHDC1-218ENST00000525745 NPM2Q86SE8 214 aaKnown RBP4.2□□□□□ -1.74
ECHDC1-218ENST00000525745 STK32CQ86UX6 486 aa4.2□□□□□ -1.74
ECHDC1-218ENST00000525745 ZNF761Q86XN6 746 aaPredicted RBP4.2□□□□□ -1.74
ECHDC1-218ENST00000525745 FAM26EQ8N5C1 309 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms