RNA–Protein interactions for RNA: ENST00000525670.5

SVIP-202, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-202ENST00000525670 MINDY4BA8MYZ0 360 aa6.92□□□□□ -1.3
SVIP-202ENST00000525670 LRRN2O75325 713 aa6.92□□□□□ -1.3
SVIP-202ENST00000525670 IL2RBP14784 551 aa6.92□□□□□ -1.3
SVIP-202ENST00000525670 TNNI2P48788 182 aa6.92□□□□□ -1.3
SVIP-202ENST00000525670 ERVFC1P60507 584 aa6.92□□□□□ -1.3
SVIP-202ENST00000525670 EGR3Q06889 387 aa6.92□□□□□ -1.3
SVIP-202ENST00000525670 MPP2Q14168 576 aa6.92□□□□□ -1.3
SVIP-202ENST00000525670 EIF4A2Q14240 407 aaKnown RBP6.92□□□□□ -1.3
SVIP-202ENST00000525670 CCDC27Q2M243 656 aa6.92□□□□□ -1.3
SVIP-202ENST00000525670 KRTAP19-4Q3LI73 84 aa6.92□□□□□ -1.3
SVIP-202ENST00000525670 SNAP47Q5SQN1 464 aa6.92□□□□□ -1.3
SVIP-202ENST00000525670 PTF1AQ7RTS3 328 aa6.92□□□□□ -1.3
SVIP-202ENST00000525670 GOLM1Q8NBJ4 401 aa6.92□□□□□ -1.3
SVIP-202ENST00000525670 FBXO15Q8NCQ5 510 aaPredicted RBP6.92□□□□□ -1.3
SVIP-202ENST00000525670 NSUN3Q9H649 340 aaKnown RBP6.92□□□□□ -1.3
SVIP-202ENST00000525670 TOGARAM1Q9Y4F4 1720 aa6.92□□□□□ -1.3
SVIP-202ENST00000525670 INSRP06213 1382 aa6.92□□□□□ -1.3
SVIP-202ENST00000525670 SBF2Q86WG5 1849 aa6.92□□□□□ -1.3
SVIP-202ENST00000525670 OVOS2A0A0G2JMS6 1433 aa6.92□□□□□ -1.3
SVIP-202ENST00000525670 GRIN3BO60391 1043 aa6.91□□□□□ -1.3
SVIP-202ENST00000525670 HMOX1P09601 288 aa6.91□□□□□ -1.3
SVIP-202ENST00000525670 FAM160A1Q05DH4 1040 aa6.91□□□□□ -1.3
SVIP-202ENST00000525670 LCE1DQ5T752 114 aa6.91□□□□□ -1.3
SVIP-202ENST00000525670 REC114Q7Z4M0 266 aa6.91□□□□□ -1.3
SVIP-202ENST00000525670 CILP2Q8IUL8 1156 aa6.91□□□□□ -1.3
SVIP-202ENST00000525670 MARCH10Q8NA82 808 aaPredicted RBP6.91□□□□□ -1.3
SVIP-202ENST00000525670 BAHD1Q8TBE0 780 aaPredicted RBP6.91□□□□□ -1.3
SVIP-202ENST00000525670 KREMEN1Q96MU8 473 aa6.91□□□□□ -1.3
SVIP-202ENST00000525670 DIRC2Q96SL1 478 aa6.91□□□□□ -1.3
SVIP-202ENST00000525670 ASPNQ9BXN1 380 aa6.91□□□□□ -1.3
SVIP-202ENST00000525670 KLHL3Q9UH77 587 aa6.91□□□□□ -1.3
SVIP-202ENST00000525670 COL3A1P02461 1466 aaPredicted RBP6.91□□□□□ -1.3
SVIP-202ENST00000525670 NHSQ6T4R5 1651 aa6.9□□□□□ -1.3
SVIP-202ENST00000525670 PKD1L3Q7Z443 1732 aa6.9□□□□□ -1.3
SVIP-202ENST00000525670 U2SURPO15042 1029 aaKnown RBP6.9□□□□□ -1.3
SVIP-202ENST00000525670 GARTP22102 1010 aa6.9□□□□□ -1.3
SVIP-202ENST00000525670 MTHFSP49914 203 aa6.9□□□□□ -1.3
SVIP-202ENST00000525670 FBLN7Q53RD9 439 aa6.9□□□□□ -1.3
SVIP-202ENST00000525670 FAM196AQ6ZSG2 479 aa6.9□□□□□ -1.3
SVIP-202ENST00000525670 PDZD8Q8NEN9 1154 aa6.9□□□□□ -1.3
SVIP-202ENST00000525670 RAPGEF4Q8WZA2 1011 aa6.9□□□□□ -1.3
SVIP-202ENST00000525670 SYTL4Q96C24 671 aaPredicted RBP6.9□□□□□ -1.3
SVIP-202ENST00000525670 TOX2Q96NM4 488 aa6.9□□□□□ -1.3
SVIP-202ENST00000525670 BTAF1O14981 1849 aa6.9□□□□□ -1.31
SVIP-202ENST00000525670 RBM47A0AV96 593 aaKnown RBP6.89□□□□□ -1.31
SVIP-202ENST00000525670 ZGLP1P0C6A0 271 aa6.89□□□□□ -1.31
SVIP-202ENST00000525670 SPOCD1Q6ZMY3 1216 aa6.89□□□□□ -1.31
SVIP-202ENST00000525670 ERMP1Q7Z2K6 904 aa6.89□□□□□ -1.31
SVIP-202ENST00000525670 PHACTR4Q8IZ21 702 aa6.89□□□□□ -1.31
SVIP-202ENST00000525670 OXR1Q8N573 874 aa6.89□□□□□ -1.31
SVIP-202ENST00000525670 FBXO27Q8NI29 283 aa6.89□□□□□ -1.31
SVIP-202ENST00000525670 DHX38Q92620 1227 aaKnown RBP6.89□□□□□ -1.31
SVIP-202ENST00000525670 GZF1Q9H116 711 aaPredicted RBP6.89□□□□□ -1.31
SVIP-202ENST00000525670 SP110Q9HB58 689 aa6.89□□□□□ -1.31
SVIP-202ENST00000525670 DCP1AQ9NPI6 582 aaPredicted RBP6.89□□□□□ -1.31
SVIP-202ENST00000525670 KBTBD4Q9NVX7 518 aa6.89□□□□□ -1.31
SVIP-202ENST00000525670 THRAP3Q9Y2W1 955 aaKnown RBP6.89□□□□□ -1.31
SVIP-202ENST00000525670 PCDHA11Q9Y5I1 949 aa6.89□□□□□ -1.31
SVIP-202ENST00000525670 NUP188Q5SRE5 1749 aa6.88□□□□□ -1.31
SVIP-202ENST00000525670 EXOC5O00471 708 aa6.88□□□□□ -1.31
SVIP-202ENST00000525670 NFIBO00712 420 aa6.88□□□□□ -1.31
SVIP-202ENST00000525670 KCNQ2O43526 872 aa6.88□□□□□ -1.31
SVIP-202ENST00000525670 DNAJA2O60884 412 aa6.88□□□□□ -1.31
SVIP-202ENST00000525670 KRT1P04264 644 aa6.88□□□□□ -1.31
SVIP-202ENST00000525670 C1QTNF9P0C862 333 aa6.88□□□□□ -1.31
SVIP-202ENST00000525670 PPP2R1AP30153 589 aa6.88□□□□□ -1.31
SVIP-202ENST00000525670 GBP1P32455 592 aa6.88□□□□□ -1.31
SVIP-202ENST00000525670 FBXL19Q6PCT2 694 aa6.88□□□□□ -1.31
SVIP-202ENST00000525670 LILRA2Q8N149 483 aa6.88□□□□□ -1.31
SVIP-202ENST00000525670 VWCEQ96DN2 955 aa6.88□□□□□ -1.31
SVIP-202ENST00000525670 KIF2CQ99661 725 aa6.88□□□□□ -1.31
SVIP-202ENST00000525670 EPB41L4BQ9H329 900 aa6.88□□□□□ -1.31
SVIP-202ENST00000525670 KCNQ5Q9NR82 932 aa6.88□□□□□ -1.31
SVIP-202ENST00000525670 SRCAPQ6ZRS2 3230 aa6.88□□□□□ -1.31
SVIP-202ENST00000525670 VIRMAQ69YN4 1812 aaKnown RBP6.87□□□□□ -1.31
SVIP-202ENST00000525670 RREB1Q92766 1687 aa6.87□□□□□ -1.31
SVIP-202ENST00000525670 KIF24Q5T7B8 1368 aa6.87□□□□□ -1.31
SVIP-202ENST00000525670 RGS13O14921 159 aa6.87□□□□□ -1.31
SVIP-202ENST00000525670 TMEM253P0C7T8 217 aa6.87□□□□□ -1.31
SVIP-202ENST00000525670 CFPP27918 469 aa6.87□□□□□ -1.31
SVIP-202ENST00000525670 TRHRP34981 398 aaPredicted RBP6.87□□□□□ -1.31
SVIP-202ENST00000525670 CHMP4BP1P59074 171 aa6.87□□□□□ -1.31
SVIP-202ENST00000525670 NR0B2Q15466 257 aa6.87□□□□□ -1.31
SVIP-202ENST00000525670 EZH2Q15910 746 aaKnown RBP6.87□□□□□ -1.31
SVIP-202ENST00000525670 CWF19L2Q2TBE0 894 aaKnown RBP6.87□□□□□ -1.31
SVIP-202ENST00000525670 SULT6B1Q6IMI4 303 aa6.87□□□□□ -1.31
SVIP-202ENST00000525670 ZCRB1Q8TBF4 217 aaKnown RBP6.87□□□□□ -1.31
SVIP-202ENST00000525670 LRRC3Q9BY71 257 aa6.87□□□□□ -1.31
SVIP-202ENST00000525670 COPRSQ9NQ92 184 aa6.87□□□□□ -1.31
SVIP-202ENST00000525670 ITGB4P16144 1822 aa6.87□□□□□ -1.31
SVIP-202ENST00000525670 PARD3Q8TEW0 1356 aa6.86□□□□□ -1.31
SVIP-202ENST00000525670 IGSF1Q8N6C5 1336 aa6.86□□□□□ -1.31
SVIP-202ENST00000525670 PCDH11XQ9BZA7 1347 aa6.86□□□□□ -1.31
SVIP-202ENST00000525670 PCDH11YQ9BZA8 1340 aa6.86□□□□□ -1.31
SVIP-202ENST00000525670 FITM1A5D6W6 292 aa6.86□□□□□ -1.31
SVIP-202ENST00000525670 SLC22A31A6NKX4 558 aa6.86□□□□□ -1.31
SVIP-202ENST00000525670 TLR3O15455 904 aaKnown RBP6.86□□□□□ -1.31
SVIP-202ENST00000525670 GREM1O60565 184 aa6.86□□□□□ -1.31
SVIP-202ENST00000525670 DIAPH1O60610 1272 aaKnown RBP6.86□□□□□ -1.31
SVIP-202ENST00000525670 ATE1O95260 518 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms