RNA–Protein interactions for RNA: ENST00000524023.1

HDAC9-228, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,199 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-228ENST00000524023 GAKO14976 1311 aa12.34□□□□□ -0.43
HDAC9-228ENST00000524023 ANO9A1A5B4 782 aa12.34□□□□□ -0.43
HDAC9-228ENST00000524023 EDIL3O43854 480 aa12.34□□□□□ -0.43
HDAC9-228ENST00000524023 CYP27A1Q02318 531 aa12.34□□□□□ -0.43
HDAC9-228ENST00000524023 VWA3BQ502W6 1294 aa12.34□□□□□ -0.43
HDAC9-228ENST00000524023 MFSD14BQ5SR56 506 aa12.34□□□□□ -0.43
HDAC9-228ENST00000524023 FAM182BQ5T319 152 aa12.34□□□□□ -0.43
HDAC9-228ENST00000524023 PRR5LQ6MZQ0 368 aa12.34□□□□□ -0.43
HDAC9-228ENST00000524023 SLF2Q8IX21 1173 aa12.34□□□□□ -0.43
HDAC9-228ENST00000524023 LARP4BQ92615 738 aaKnown RBP12.34□□□□□ -0.43
HDAC9-228ENST00000524023 COA7Q96BR5 231 aa12.34□□□□□ -0.43
HDAC9-228ENST00000524023 NGLY1Q96IV0 654 aa12.34□□□□□ -0.43
HDAC9-228ENST00000524023 RPGRIP1Q96KN7 1286 aa12.34□□□□□ -0.43
HDAC9-228ENST00000524023 C8orf37Q96NL8 207 aa12.34□□□□□ -0.43
HDAC9-228ENST00000524023 DUSP10Q9Y6W6 482 aa12.34□□□□□ -0.43
HDAC9-228ENST00000524023 FRMPD2Q68DX3 1309 aaPredicted RBP12.34□□□□□ -0.43
HDAC9-228ENST00000524023 LTBP4Q8N2S1 1624 aa12.34□□□□□ -0.43
HDAC9-228ENST00000524023 ZNF263O14978 683 aa12.33□□□□□ -0.44
HDAC9-228ENST00000524023 SLC37A4O43826 429 aa12.33□□□□□ -0.44
HDAC9-228ENST00000524023 N4BP1O75113 896 aaKnown RBP12.33□□□□□ -0.44
HDAC9-228ENST00000524023 HNRNPH3P31942 346 aaKnown RBP12.33□□□□□ -0.44
HDAC9-228ENST00000524023 ADCY7P51828 1080 aa12.33□□□□□ -0.44
HDAC9-228ENST00000524023 VAV2P52735 878 aa12.33□□□□□ -0.44
HDAC9-228ENST00000524023 CKAP4Q07065 602 aaKnown RBP12.33□□□□□ -0.44
HDAC9-228ENST00000524023 TMEM266Q2M3C6 531 aa12.33□□□□□ -0.44
HDAC9-228ENST00000524023 CERKQ8TCT0 537 aa12.33□□□□□ -0.44
HDAC9-228ENST00000524023 CAPZA3Q96KX2 299 aa12.33□□□□□ -0.44
HDAC9-228ENST00000524023 CCDC42Q96M95 316 aa12.33□□□□□ -0.44
HDAC9-228ENST00000524023 NDST4Q9H3R1 872 aa12.33□□□□□ -0.44
HDAC9-228ENST00000524023 MTMR4Q9NYA4 1195 aa12.33□□□□□ -0.44
HDAC9-228ENST00000524023 VPS18Q9P253 973 aa12.33□□□□□ -0.44
HDAC9-228ENST00000524023 PLAGL2Q9UPG8 496 aa12.33□□□□□ -0.44
HDAC9-228ENST00000524023 SIK3Q9Y2K2 1263 aa12.33□□□□□ -0.44
HDAC9-228ENST00000524023 PLIN4Q96Q06 1357 aa12.33□□□□□ -0.44
HDAC9-228ENST00000524023 LRRIQ3A6PVS8 624 aaPredicted RBP12.33□□□□□ -0.44
HDAC9-228ENST00000524023 TDP2O95551 362 aa12.33□□□□□ -0.44
HDAC9-228ENST00000524023 KIF5AQ12840 1032 aa12.33□□□□□ -0.44
HDAC9-228ENST00000524023 PDIA5Q14554 519 aa12.33□□□□□ -0.44
HDAC9-228ENST00000524023 CRY2Q49AN0 593 aa12.33□□□□□ -0.44
HDAC9-228ENST00000524023 ASPRV1Q53RT3 343 aa12.33□□□□□ -0.44
HDAC9-228ENST00000524023 FAM196AQ6ZSG2 479 aa12.33□□□□□ -0.44
HDAC9-228ENST00000524023 DYMQ7RTS9 669 aa12.33□□□□□ -0.44
HDAC9-228ENST00000524023 GUF1Q8N442 669 aaKnown RBP12.33□□□□□ -0.44
HDAC9-228ENST00000524023 CDK5RAP3Q96JB5 506 aa12.33□□□□□ -0.44
HDAC9-228ENST00000524023 ABCB11O95342 1321 aa12.33□□□□□ -0.44
HDAC9-228ENST00000524023 POTEMA6NI47 508 aa12.32□□□□□ -0.44
HDAC9-228ENST00000524023 PLEKP08567 350 aaPredicted RBP12.32□□□□□ -0.44
HDAC9-228ENST00000524023 MCM3P25205 808 aa12.32□□□□□ -0.44
HDAC9-228ENST00000524023 SPA17Q15506 151 aa12.32□□□□□ -0.44
HDAC9-228ENST00000524023 MAN2A1Q16706 1144 aa12.32□□□□□ -0.44
HDAC9-228ENST00000524023 TBC1D22AQ8WUA7 517 aa12.32□□□□□ -0.44
HDAC9-228ENST00000524023 RAD54LQ92698 747 aa12.32□□□□□ -0.44
HDAC9-228ENST00000524023 SECISBP2LQ93073 1101 aaKnown RBP12.32□□□□□ -0.44
HDAC9-228ENST00000524023 RAB34Q9BZG1 259 aa12.32□□□□□ -0.44
HDAC9-228ENST00000524023 TSGA10Q9BZW7 698 aa12.32□□□□□ -0.44
HDAC9-228ENST00000524023 RNF216Q9NWF9 866 aaPredicted RBP12.32□□□□□ -0.44
HDAC9-228ENST00000524023 ARHGAP20Q9P2F6 1191 aa12.32□□□□□ -0.44
HDAC9-228ENST00000524023 MACROD2A1Z1Q3 448 aa12.32□□□□□ -0.44
HDAC9-228ENST00000524023 TARSL2A2RTX5 802 aaKnown RBP12.32□□□□□ -0.44
HDAC9-228ENST00000524023 EPHB6O15197 1021 aa12.32□□□□□ -0.44
HDAC9-228ENST00000524023 FGFR1OPO95684 399 aaKnown RBP12.32□□□□□ -0.44
HDAC9-228ENST00000524023 SNHG28P0DPA3 235 aa12.32□□□□□ -0.44
HDAC9-228ENST00000524023 IDEP14735 1019 aa12.32□□□□□ -0.44
HDAC9-228ENST00000524023 KRT26Q7Z3Y9 468 aa12.32□□□□□ -0.44
HDAC9-228ENST00000524023 NUDT12Q9BQG2 462 aa12.32□□□□□ -0.44
HDAC9-228ENST00000524023 POLLQ9UGP5 575 aa12.32□□□□□ -0.44
HDAC9-228ENST00000524023 FAN1Q9Y2M0 1017 aa12.32□□□□□ -0.44
HDAC9-228ENST00000524023 DAGLAQ9Y4D2 1042 aa12.32□□□□□ -0.44
HDAC9-228ENST00000524023 MYH10P35580 1976 aa12.31□□□□□ -0.44
HDAC9-228ENST00000524023 PDE2AO00408 941 aaPredicted RBP12.31□□□□□ -0.44
HDAC9-228ENST00000524023 ZNF185O15231 689 aa12.31□□□□□ -0.44
HDAC9-228ENST00000524023 AKR1B1P15121 316 aa12.31□□□□□ -0.44
HDAC9-228ENST00000524023 LMAN1P49257 510 aa12.31□□□□□ -0.44
HDAC9-228ENST00000524023 LRRC63Q05C16 580 aa12.31□□□□□ -0.44
HDAC9-228ENST00000524023 GABPAQ06546 454 aa12.31□□□□□ -0.44
HDAC9-228ENST00000524023 EHHADHQ08426 723 aa12.31□□□□□ -0.44
HDAC9-228ENST00000524023 CCDC96Q2M329 555 aa12.31□□□□□ -0.44
HDAC9-228ENST00000524023 TMEM119Q4V9L6 283 aa12.31□□□□□ -0.44
HDAC9-228ENST00000524023 MUM1L1Q5H9M0 696 aa12.31□□□□□ -0.44
HDAC9-228ENST00000524023 KRT79Q5XKE5 535 aa12.31□□□□□ -0.44
HDAC9-228ENST00000524023 CCDC84Q86UT8 332 aaPredicted RBP12.31□□□□□ -0.44
HDAC9-228ENST00000524023 C2CD5Q86YS7 1000 aa12.31□□□□□ -0.44
HDAC9-228ENST00000524023 LRRC47Q8N1G4 583 aaKnown RBP12.31□□□□□ -0.44
HDAC9-228ENST00000524023 FAM71BQ8TC56 605 aa12.31□□□□□ -0.44
HDAC9-228ENST00000524023 SNX29Q8TEQ0 813 aa12.31□□□□□ -0.44
HDAC9-228ENST00000524023 ZBTB9Q96C00 473 aa12.31□□□□□ -0.44
HDAC9-228ENST00000524023 RBM17Q96I25 401 aaKnown RBP12.31□□□□□ -0.44
HDAC9-228ENST00000524023 ACBD3Q9H3P7 528 aa12.31□□□□□ -0.44
HDAC9-228ENST00000524023 VIPAS39Q9H9C1 493 aa12.31□□□□□ -0.44
HDAC9-228ENST00000524023 FAM207AQ9NSI2 230 aaPredicted RBP12.31□□□□□ -0.44
HDAC9-228ENST00000524023 PODXL2Q9NZ53 605 aa12.31□□□□□ -0.44
HDAC9-228ENST00000524023 IGKV6D-41A0A0C4DH26 115 aa12.3□□□□□ -0.44
HDAC9-228ENST00000524023 USO1O60763 962 aaKnown RBP12.3□□□□□ -0.44
HDAC9-228ENST00000524023 LCA5LO95447 670 aa12.3□□□□□ -0.44
HDAC9-228ENST00000524023 HOXA7P31268 230 aaPredicted RBP12.3□□□□□ -0.44
HDAC9-228ENST00000524023 PSMD2Q13200 908 aa12.3□□□□□ -0.44
HDAC9-228ENST00000524023 MAP9Q49MG5 647 aa12.3□□□□□ -0.44
HDAC9-228ENST00000524023 HSP90B2PQ58FF3 399 aa12.3□□□□□ -0.44
HDAC9-228ENST00000524023 LRRC55Q6ZSA7 311 aa12.3□□□□□ -0.44
HDAC9-228ENST00000524023 KCNK18Q7Z418 384 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms