RNA–Protein interactions for RNA: ENST00000522557.1

HMGB1P1-201, Transcript of high mobility group box 1 pseudogene 1, humanhuman

BASIC

Gene HMGB1P1, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1-201ENST00000522557 LRRC56Q8IYG6 542 aaPredicted RBP6.81□□□□□ -1.32
HMGB1P1-201ENST00000522557 BVESQ8NE79 360 aa6.81□□□□□ -1.32
HMGB1P1-201ENST00000522557 TOX2Q96NM4 488 aa6.81□□□□□ -1.32
HMGB1P1-201ENST00000522557 CNTD2Q9H8S5 307 aa6.81□□□□□ -1.32
HMGB1P1-201ENST00000522557 IFT57Q9NWB7 429 aa6.81□□□□□ -1.32
HMGB1P1-201ENST00000522557 SIRT5Q9NXA8 310 aa6.81□□□□□ -1.32
HMGB1P1-201ENST00000522557 MBD1Q9UIS9 605 aaPredicted RBP6.81□□□□□ -1.32
HMGB1P1-201ENST00000522557 BACE2Q9Y5Z0 518 aa6.81□□□□□ -1.32
HMGB1P1-201ENST00000522557 IQCA1LA6NCM1 817 aa6.8□□□□□ -1.32
HMGB1P1-201ENST00000522557 PPP1R11O60927 126 aaPredicted RBP6.8□□□□□ -1.32
HMGB1P1-201ENST00000522557 RFPL3O75679 317 aa6.8□□□□□ -1.32
HMGB1P1-201ENST00000522557 POU3F3P20264 500 aaPredicted RBP6.8□□□□□ -1.32
HMGB1P1-201ENST00000522557 TACR1P25103 407 aa6.8□□□□□ -1.32
HMGB1P1-201ENST00000522557 L1CAMP32004 1257 aa6.8□□□□□ -1.32
HMGB1P1-201ENST00000522557 SEPHS1P49903 392 aa6.8□□□□□ -1.32
HMGB1P1-201ENST00000522557 GYS2P54840 703 aa6.8□□□□□ -1.32
HMGB1P1-201ENST00000522557 TCEA2Q15560 299 aa6.8□□□□□ -1.32
HMGB1P1-201ENST00000522557 TM4SF20Q53R12 229 aa6.8□□□□□ -1.32
HMGB1P1-201ENST00000522557 RPUSD2Q8IZ73 545 aaKnown RBP6.8□□□□□ -1.32
HMGB1P1-201ENST00000522557 GPRC5CQ9NQ84 441 aa6.8□□□□□ -1.32
HMGB1P1-201ENST00000522557 PDLIM7Q9NR12 457 aa6.8□□□□□ -1.32
HMGB1P1-201ENST00000522557 PLAAQ9Y263 795 aa6.8□□□□□ -1.32
HMGB1P1-201ENST00000522557 CCDC163A0A0D9SF12 145 aa6.79□□□□□ -1.32
HMGB1P1-201ENST00000522557 HRKO00198 91 aa6.79□□□□□ -1.32
HMGB1P1-201ENST00000522557 NOP56O00567 594 aaKnown RBP6.79□□□□□ -1.32
HMGB1P1-201ENST00000522557 KCNQ2O43526 872 aa6.79□□□□□ -1.32
HMGB1P1-201ENST00000522557 MASP1P48740 699 aa6.79□□□□□ -1.32
HMGB1P1-201ENST00000522557 EPHB3P54753 998 aa6.79□□□□□ -1.32
HMGB1P1-201ENST00000522557 CBX2Q14781 532 aaPredicted RBP6.79□□□□□ -1.32
HMGB1P1-201ENST00000522557 RPTNQ6XPR3 784 aa6.79□□□□□ -1.32
HMGB1P1-201ENST00000522557 NLGN2Q8NFZ4 835 aa6.79□□□□□ -1.32
HMGB1P1-201ENST00000522557 PCDH12Q9NPG4 1184 aa6.79□□□□□ -1.32
HMGB1P1-201ENST00000522557 CD2APQ9Y5K6 639 aa6.79□□□□□ -1.32
HMGB1P1-201ENST00000522557 A0A1W2PQJ5 194 aa6.78□□□□□ -1.32
HMGB1P1-201ENST00000522557 FAM83GA6ND36 823 aa6.78□□□□□ -1.32
HMGB1P1-201ENST00000522557 ABLIM1O14639 778 aa6.78□□□□□ -1.32
HMGB1P1-201ENST00000522557 PPP1R12AO14974 1030 aaPredicted RBP6.78□□□□□ -1.32
HMGB1P1-201ENST00000522557 TBX1O43435 398 aa6.78□□□□□ -1.32
HMGB1P1-201ENST00000522557 ITGAVP06756 1048 aa6.78□□□□□ -1.32
HMGB1P1-201ENST00000522557 C6orf222P0C671 652 aaPredicted RBP6.78□□□□□ -1.32
HMGB1P1-201ENST00000522557 NAT2P11245 290 aa6.78□□□□□ -1.32
HMGB1P1-201ENST00000522557 FGFR1P11362 822 aa6.78□□□□□ -1.32
HMGB1P1-201ENST00000522557 LINC00310P59036 64 aa6.78□□□□□ -1.32
HMGB1P1-201ENST00000522557 PPP2R2AP63151 447 aa6.78□□□□□ -1.32
HMGB1P1-201ENST00000522557 AMPD3Q01432 767 aa6.78□□□□□ -1.32
HMGB1P1-201ENST00000522557 CYP4F3Q08477 520 aa6.78□□□□□ -1.32
HMGB1P1-201ENST00000522557 SCRN1Q12765 414 aa6.78□□□□□ -1.32
HMGB1P1-201ENST00000522557 SV2CQ496J9 727 aa6.78□□□□□ -1.32
HMGB1P1-201ENST00000522557 TRIM61Q5EBN2 209 aa6.78□□□□□ -1.32
HMGB1P1-201ENST00000522557 YOD1Q5VVQ6 348 aaPredicted RBP6.78□□□□□ -1.32
HMGB1P1-201ENST00000522557 BICRALQ6AI39 1079 aa6.78□□□□□ -1.32
HMGB1P1-201ENST00000522557 GTF2IRD2BQ6EKJ0 949 aa6.78□□□□□ -1.32
HMGB1P1-201ENST00000522557 LCNL1Q6ZST4 164 aa6.78□□□□□ -1.32
HMGB1P1-201ENST00000522557 TMC6Q7Z403 805 aa6.78□□□□□ -1.32
HMGB1P1-201ENST00000522557 GTF2IRD2Q86UP8 949 aa6.78□□□□□ -1.32
HMGB1P1-201ENST00000522557 TRIM59Q8IWR1 403 aa6.78□□□□□ -1.32
HMGB1P1-201ENST00000522557 OSBP2Q969R2 916 aa6.78□□□□□ -1.32
HMGB1P1-201ENST00000522557 NCOA5Q9HCD5 579 aaKnown RBP6.78□□□□□ -1.32
HMGB1P1-201ENST00000522557 HCFC2Q9Y5Z7 792 aa6.78□□□□□ -1.32
HMGB1P1-201ENST00000522557 NPHP3-ACAD11A0A0J9YXS1 232 aa6.77□□□□□ -1.33
HMGB1P1-201ENST00000522557 DNAJC6O75061 913 aa6.77□□□□□ -1.33
HMGB1P1-201ENST00000522557 ASMTLO95671 621 aa6.77□□□□□ -1.33
HMGB1P1-201ENST00000522557 DBHP09172 617 aa6.77□□□□□ -1.33
HMGB1P1-201ENST00000522557 PAMP19021 973 aa6.77□□□□□ -1.33
HMGB1P1-201ENST00000522557 CDR1P51861 262 aa6.77□□□□□ -1.33
HMGB1P1-201ENST00000522557 SSPNQ14714 243 aa6.77□□□□□ -1.33
HMGB1P1-201ENST00000522557 RNF187Q5TA31 235 aaPredicted RBP6.77□□□□□ -1.33
HMGB1P1-201ENST00000522557 POMZP3Q6PJE2 187 aa6.77□□□□□ -1.33
HMGB1P1-201ENST00000522557 KRT26Q7Z3Y9 468 aa6.77□□□□□ -1.33
HMGB1P1-201ENST00000522557 FILIP1Q7Z7B0 1213 aa6.77□□□□□ -1.33
HMGB1P1-201ENST00000522557 ZSCAN18Q8TBC5 510 aaPredicted RBP6.77□□□□□ -1.33
HMGB1P1-201ENST00000522557 PANK1Q8TE04 598 aa6.77□□□□□ -1.33
HMGB1P1-201ENST00000522557 COPS5Q92905 334 aa6.77□□□□□ -1.33
HMGB1P1-201ENST00000522557 NINJ1Q92982 152 aa6.77□□□□□ -1.33
HMGB1P1-201ENST00000522557 C1orf159Q96HA4 380 aa6.77□□□□□ -1.33
HMGB1P1-201ENST00000522557 IRF2BPLQ9H1B7 796 aa6.77□□□□□ -1.33
HMGB1P1-201ENST00000522557 SPC25Q9HBM1 224 aa6.77□□□□□ -1.33
HMGB1P1-201ENST00000522557 CLEC1BQ9P126 229 aa6.77□□□□□ -1.33
HMGB1P1-201ENST00000522557 FBLN5Q9UBX5 448 aa6.77□□□□□ -1.33
HMGB1P1-201ENST00000522557 CNOT6Q9ULM6 557 aaKnown RBP6.77□□□□□ -1.33
HMGB1P1-201ENST00000522557 NOP58Q9Y2X3 529 aaKnown RBP6.77□□□□□ -1.33
HMGB1P1-201ENST00000522557 MRPS23Q9Y3D9 190 aaKnown RBP6.77□□□□□ -1.33
HMGB1P1-201ENST00000522557 COL4A3BPQ9Y5P4 624 aa6.77□□□□□ -1.33
HMGB1P1-201ENST00000522557 A0A087X0B3 334 aa6.76□□□□□ -1.33
HMGB1P1-201ENST00000522557 N4BP3O15049 544 aa6.76□□□□□ -1.33
HMGB1P1-201ENST00000522557 PPM1GO15355 546 aaPredicted RBP6.76□□□□□ -1.33
HMGB1P1-201ENST00000522557 CLSTN1O94985 981 aa6.76□□□□□ -1.33
HMGB1P1-201ENST00000522557 PLS3P13797 630 aa6.76□□□□□ -1.33
HMGB1P1-201ENST00000522557 GRIA2P42262 883 aa6.76□□□□□ -1.33
HMGB1P1-201ENST00000522557 NCKAP1LP55160 1127 aa6.76□□□□□ -1.33
HMGB1P1-201ENST00000522557 SPOCD1Q6ZMY3 1216 aa6.76□□□□□ -1.33
HMGB1P1-201ENST00000522557 LDHDQ86WU2 507 aa6.76□□□□□ -1.33
HMGB1P1-201ENST00000522557 THNSL2Q86YJ6 484 aa6.76□□□□□ -1.33
HMGB1P1-201ENST00000522557 BTN2A2Q8WVV5 523 aa6.76□□□□□ -1.33
HMGB1P1-201ENST00000522557 AARSD1Q9BTE6 412 aaKnown RBP6.76□□□□□ -1.33
HMGB1P1-201ENST00000522557 CYP26B1Q9NR63 512 aa6.76□□□□□ -1.33
HMGB1P1-201ENST00000522557 GULP1Q9UBP9 304 aa6.76□□□□□ -1.33
HMGB1P1-201ENST00000522557 RWDD3Q9Y3V2 267 aa6.76□□□□□ -1.33
HMGB1P1-201ENST00000522557 ZC3H12DA2A288 527 aaKnown RBP6.75□□□□□ -1.33
HMGB1P1-201ENST00000522557 C7orf72A4D263 438 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms