RNA–Protein interactions for RNA: ENST00000521977.1

SHPRH-209, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 5

Gene SHPRH, Length 927 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-209ENST00000521977 ATP2B1P20020 1258 aa10.85□□□□□ -0.67
SHPRH-209ENST00000521977 CMA1P23946 247 aa10.85□□□□□ -0.67
SHPRH-209ENST00000521977 MARCKSP29966 332 aaPredicted RBP10.85□□□□□ -0.67
SHPRH-209ENST00000521977 GJA5P36382 358 aa10.85□□□□□ -0.67
SHPRH-209ENST00000521977 OAZ1P54368 228 aa10.85□□□□□ -0.67
SHPRH-209ENST00000521977 LSM11P83369 360 aaKnown RBP eCLIP10.85□□□□□ -0.67
SHPRH-209ENST00000521977 ZNF174Q15697 407 aa10.85□□□□□ -0.67
SHPRH-209ENST00000521977 CAVIN1Q6NZI2 390 aaKnown RBP10.85□□□□□ -0.67
SHPRH-209ENST00000521977 USP17L6PQ6QN14 398 aa10.85□□□□□ -0.67
SHPRH-209ENST00000521977 SAMD3Q8N6K7 520 aa10.85□□□□□ -0.67
SHPRH-209ENST00000521977 KRI1Q8N9T8 703 aaKnown RBP10.85□□□□□ -0.67
SHPRH-209ENST00000521977 ENGASEQ8NFI3 743 aa10.85□□□□□ -0.67
SHPRH-209ENST00000521977 CRYGNQ8WXF5 182 aa10.85□□□□□ -0.67
SHPRH-209ENST00000521977 CLEC4DQ8WXI8 215 aa10.85□□□□□ -0.67
SHPRH-209ENST00000521977 RNF166Q96A37 237 aaPredicted RBP10.85□□□□□ -0.67
SHPRH-209ENST00000521977 ATG4CQ96DT6 458 aa10.85□□□□□ -0.67
SHPRH-209ENST00000521977 AGBL1Q96MI9 1066 aa10.85□□□□□ -0.67
SHPRH-209ENST00000521977 GOLPH3LQ9H4A5 285 aa10.85□□□□□ -0.67
SHPRH-209ENST00000521977 A0A0G2JMZ2 1700 aa10.84□□□□□ -0.67
SHPRH-209ENST00000521977 SPDYE16A6NNV3 312 aaPredicted RBP10.84□□□□□ -0.67
SHPRH-209ENST00000521977 FOSP01100 380 aaPredicted RBP10.84□□□□□ -0.67
SHPRH-209ENST00000521977 PTGDRQ13258 359 aa10.84□□□□□ -0.67
SHPRH-209ENST00000521977 SNW1Q13573 536 aaKnown RBP10.84□□□□□ -0.67
SHPRH-209ENST00000521977 TREML2Q5T2D2 321 aa10.84□□□□□ -0.67
SHPRH-209ENST00000521977 RESP18Q5W5W9 173 aa10.84□□□□□ -0.67
SHPRH-209ENST00000521977 ARL6IP4Q66PJ3 421 aaKnown RBP10.84□□□□□ -0.67
SHPRH-209ENST00000521977 PPP4R3AQ6IN85 833 aa10.84□□□□□ -0.67
SHPRH-209ENST00000521977 SHC4Q6S5L8 630 aa10.84□□□□□ -0.67
SHPRH-209ENST00000521977 LBX2Q6XYB7 198 aa10.84□□□□□ -0.67
SHPRH-209ENST00000521977 CCAR1Q8IX12 1150 aaKnown RBP10.84□□□□□ -0.67
SHPRH-209ENST00000521977 MRPS27Q92552 414 aaKnown RBP10.84□□□□□ -0.67
SHPRH-209ENST00000521977 SYAP1Q96A49 352 aaPredicted RBP10.84□□□□□ -0.67
SHPRH-209ENST00000521977 FERMT2Q96AC1 680 aa10.84□□□□□ -0.67
SHPRH-209ENST00000521977 WNK4Q96J92 1243 aa10.84□□□□□ -0.67
SHPRH-209ENST00000521977 CLIC6Q96NY7 704 aa10.84□□□□□ -0.67
SHPRH-209ENST00000521977 ANO3Q9BYT9 981 aa10.84□□□□□ -0.67
SHPRH-209ENST00000521977 CRISPLD2Q9H0B8 497 aa10.84□□□□□ -0.67
SHPRH-209ENST00000521977 ZNF408Q9H9D4 720 aa10.84□□□□□ -0.67
SHPRH-209ENST00000521977 RAVER2Q9HCJ3 691 aaKnown RBP10.84□□□□□ -0.67
SHPRH-209ENST00000521977 HOXC10Q9NYD6 342 aa10.84□□□□□ -0.67
SHPRH-209ENST00000521977 CCPG1Q9ULG6 757 aa10.84□□□□□ -0.67
SHPRH-209ENST00000521977 AGTPBP1Q9UPW5 1226 aa10.84□□□□□ -0.67
SHPRH-209ENST00000521977 HPSEQ9Y251 543 aa10.84□□□□□ -0.67
SHPRH-209ENST00000521977 TRPM7Q96QT4 1865 aa10.84□□□□□ -0.67
SHPRH-209ENST00000521977 MYH7BA7E2Y1 1941 aa10.84□□□□□ -0.67
SHPRH-209ENST00000521977 COL11A1P12107 1806 aaPredicted RBP10.84□□□□□ -0.67
SHPRH-209ENST00000521977 LAD1O00515 517 aa10.83□□□□□ -0.68
SHPRH-209ENST00000521977 NR1I2O75469 434 aa10.83□□□□□ -0.68
SHPRH-209ENST00000521977 CELF2O95319 508 aaKnown RBP10.83□□□□□ -0.68
SHPRH-209ENST00000521977 MCM7P33993 719 aa10.83□□□□□ -0.68
SHPRH-209ENST00000521977 SREBF1P36956 1147 aa10.83□□□□□ -0.68
SHPRH-209ENST00000521977 PRPHP41219 470 aa10.83□□□□□ -0.68
SHPRH-209ENST00000521977 HSD17B4P51659 736 aa10.83□□□□□ -0.68
SHPRH-209ENST00000521977 USP11P51784 963 aa10.83□□□□□ -0.68
SHPRH-209ENST00000521977 GRIN1Q05586 938 aa10.83□□□□□ -0.68
SHPRH-209ENST00000521977 FAM160A1Q05DH4 1040 aa10.83□□□□□ -0.68
SHPRH-209ENST00000521977 LETM2Q2VYF4 491 aa10.83□□□□□ -0.68
SHPRH-209ENST00000521977 CCDC183Q5T5S1 534 aa10.83□□□□□ -0.68
SHPRH-209ENST00000521977 CST9Q5W186 159 aa10.83□□□□□ -0.68
SHPRH-209ENST00000521977 GPAT2Q6NUI2 795 aa10.83□□□□□ -0.68
SHPRH-209ENST00000521977 POTEEQ6S8J3 1075 aa10.83□□□□□ -0.68
SHPRH-209ENST00000521977 MOXD1Q6UVY6 613 aa10.83□□□□□ -0.68
SHPRH-209ENST00000521977 GADL1Q6ZQY3 521 aa10.83□□□□□ -0.68
SHPRH-209ENST00000521977 FASTKD5Q7L8L6 764 aaKnown RBP10.83□□□□□ -0.68
SHPRH-209ENST00000521977 FMR1NBQ8N0W7 255 aaPredicted RBP10.83□□□□□ -0.68
SHPRH-209ENST00000521977 C2orf69Q8N8R5 385 aa10.83□□□□□ -0.68
SHPRH-209ENST00000521977 FSIP1Q8NA03 581 aa10.83□□□□□ -0.68
SHPRH-209ENST00000521977 ZNF526Q8TF50 670 aaPredicted RBP10.83□□□□□ -0.68
SHPRH-209ENST00000521977 SLC10A4Q96EP9 437 aa10.83□□□□□ -0.68
SHPRH-209ENST00000521977 MBOAT7Q96N66 472 aa10.83□□□□□ -0.68
SHPRH-209ENST00000521977 NAP1L4Q99733 375 aaKnown RBP10.83□□□□□ -0.68
SHPRH-209ENST00000521977 MAF1Q9H063 256 aa10.83□□□□□ -0.68
SHPRH-209ENST00000521977 TMEM60Q9H2L4 133 aa10.83□□□□□ -0.68
SHPRH-209ENST00000521977 DDX19AQ9NUU7 478 aaKnown RBP10.83□□□□□ -0.68
SHPRH-209ENST00000521977 MAP3K20Q9NYL2 800 aaKnown RBP10.83□□□□□ -0.68
SHPRH-209ENST00000521977 ZNF214Q9UL59 606 aaPredicted RBP10.83□□□□□ -0.68
SHPRH-209ENST00000521977 MRVI1Q9Y6F6 885 aa10.83□□□□□ -0.68
SHPRH-209ENST00000521977 CYP3A7-CYP3A51PA0A087WV96 503 aa10.82□□□□□ -0.68
SHPRH-209ENST00000521977 A0A1B0GVL5 298 aa10.82□□□□□ -0.68
SHPRH-209ENST00000521977 GCOM1H8Y6P7 765 aaPredicted RBP10.82□□□□□ -0.68
SHPRH-209ENST00000521977 NEMFO60524 1076 aa10.82□□□□□ -0.68
SHPRH-209ENST00000521977 CCNT1O60563 726 aaKnown RBP10.82□□□□□ -0.68
SHPRH-209ENST00000521977 CYP3A4P08684 503 aa10.82□□□□□ -0.68
SHPRH-209ENST00000521977 POLR2MP0CAP2 368 aa10.82□□□□□ -0.68
SHPRH-209ENST00000521977 PFKFB1P16118 471 aa10.82□□□□□ -0.68
SHPRH-209ENST00000521977 GCFC2P16383 781 aaKnown RBP10.82□□□□□ -0.68
SHPRH-209ENST00000521977 CYP3A7P24462 503 aa10.82□□□□□ -0.68
SHPRH-209ENST00000521977 CIITAP33076 1130 aa10.82□□□□□ -0.68
SHPRH-209ENST00000521977 ZNF445P59923 1031 aa10.82□□□□□ -0.68
SHPRH-209ENST00000521977 SNAPC2Q13487 334 aa10.82□□□□□ -0.68
SHPRH-209ENST00000521977 TMEM132BQ14DG7 1078 aa10.82□□□□□ -0.68
SHPRH-209ENST00000521977 IL17AQ16552 155 aa10.82□□□□□ -0.68
SHPRH-209ENST00000521977 TKFCQ3LXA3 575 aa10.82□□□□□ -0.68
SHPRH-209ENST00000521977 ZSCAN23Q3MJ62 389 aa10.82□□□□□ -0.68
SHPRH-209ENST00000521977 CCDC73Q6ZRK6 1079 aa10.82□□□□□ -0.68
SHPRH-209ENST00000521977 MCF2L2Q86YR7 1114 aa10.82□□□□□ -0.68
SHPRH-209ENST00000521977 MB21D1Q8N884 522 aa10.82□□□□□ -0.68
SHPRH-209ENST00000521977 TBC1D5Q92609 795 aa10.82□□□□□ -0.68
SHPRH-209ENST00000521977 MTMR9Q96QG7 549 aa10.82□□□□□ -0.68
SHPRH-209ENST00000521977 CSRNP2Q9H175 543 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms