RNA–Protein interactions for RNA: ENST00000521724.5

CTNNA1-230, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 2,741 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-230ENST00000521724 KIF9Q9HAQ2 790 aa10.62□□□□□ -0.71
CTNNA1-230ENST00000521724 BATF3Q9NR55 127 aa10.62□□□□□ -0.71
CTNNA1-230ENST00000521724 ADAMTSL3P82987 1691 aa10.62□□□□□ -0.71
CTNNA1-230ENST00000521724 PMS1P54277 932 aaKnown RBP10.62□□□□□ -0.71
CTNNA1-230ENST00000521724 CTDSPL2Q05D32 466 aa10.62□□□□□ -0.71
CTNNA1-230ENST00000521724 PTGDRQ13258 359 aa10.62□□□□□ -0.71
CTNNA1-230ENST00000521724 PPP1R7Q15435 360 aa10.62□□□□□ -0.71
CTNNA1-230ENST00000521724 NBPF20Q3BBV1 942 aa10.62□□□□□ -0.71
CTNNA1-230ENST00000521724 EARS2Q5JPH6 523 aaKnown RBP10.62□□□□□ -0.71
CTNNA1-230ENST00000521724 RRP12Q5JTH9 1297 aaKnown RBP10.62□□□□□ -0.71
CTNNA1-230ENST00000521724 ARMC9Q7Z3E5 817 aa10.62□□□□□ -0.71
CTNNA1-230ENST00000521724 CPLX4Q7Z7G2 160 aa10.62□□□□□ -0.71
CTNNA1-230ENST00000521724 TMBIM4Q9HC24 238 aa10.62□□□□□ -0.71
CTNNA1-230ENST00000521724 PARP4Q9UKK3 1724 aaKnown RBP10.61□□□□□ -0.71
CTNNA1-230ENST00000521724 BACH1O14867 736 aa10.61□□□□□ -0.71
CTNNA1-230ENST00000521724 IDH1O75874 414 aaKnown RBP10.61□□□□□ -0.71
CTNNA1-230ENST00000521724 ADD2P35612 726 aa10.61□□□□□ -0.71
CTNNA1-230ENST00000521724 MCAMP43121 646 aa10.61□□□□□ -0.71
CTNNA1-230ENST00000521724 ELF3P78545 371 aaPredicted RBP10.61□□□□□ -0.71
CTNNA1-230ENST00000521724 CDC37Q16543 378 aaPredicted RBP10.61□□□□□ -0.71
CTNNA1-230ENST00000521724 LACTB2Q53H82 288 aaPredicted RBP10.61□□□□□ -0.71
CTNNA1-230ENST00000521724 AP1ARQ63HQ0 302 aa10.61□□□□□ -0.71
CTNNA1-230ENST00000521724 PDXDC2PQ6P474 469 aa10.61□□□□□ -0.71
CTNNA1-230ENST00000521724 TAX1BP1Q86VP1 789 aa10.61□□□□□ -0.71
CTNNA1-230ENST00000521724 ADSSL1Q8N142 457 aa10.61□□□□□ -0.71
CTNNA1-230ENST00000521724 P3H4Q92791 437 aa10.61□□□□□ -0.71
CTNNA1-230ENST00000521724 SH3GL3Q99963 347 aa10.61□□□□□ -0.71
CTNNA1-230ENST00000521724 PYM1Q9BRP8 204 aaKnown RBP10.61□□□□□ -0.71
CTNNA1-230ENST00000521724 THAP9Q9H5L6 903 aa10.61□□□□□ -0.71
CTNNA1-230ENST00000521724 ERICH2A1L162 156 aa10.61□□□□□ -0.71
CTNNA1-230ENST00000521724 KLHL33A6NCF5 533 aa10.61□□□□□ -0.71
CTNNA1-230ENST00000521724 WNT7AO00755 349 aa10.61□□□□□ -0.71
CTNNA1-230ENST00000521724 AKR1B10O60218 316 aa10.61□□□□□ -0.71
CTNNA1-230ENST00000521724 DNAJC8O75937 253 aaPredicted RBP10.61□□□□□ -0.71
CTNNA1-230ENST00000521724 KRT2P35908 639 aa10.61□□□□□ -0.71
CTNNA1-230ENST00000521724 CDK17Q00537 523 aa10.61□□□□□ -0.71
CTNNA1-230ENST00000521724 HLTFQ14527 1009 aaKnown RBP eCLIP10.61□□□□□ -0.71
CTNNA1-230ENST00000521724 WTAPQ15007 396 aa10.61□□□□□ -0.71
CTNNA1-230ENST00000521724 CCDC57Q2TAC2 916 aa10.61□□□□□ -0.71
CTNNA1-230ENST00000521724 C2CD5Q86YS7 1000 aa10.61□□□□□ -0.71
CTNNA1-230ENST00000521724 ANKRD13CQ8N6S4 541 aa10.61□□□□□ -0.71
CTNNA1-230ENST00000521724 LMBR1Q8WVP7 490 aa10.61□□□□□ -0.71
CTNNA1-230ENST00000521724 STAMBPL1Q96FJ0 436 aa10.61□□□□□ -0.71
CTNNA1-230ENST00000521724 ISCA1Q9BUE6 129 aa10.61□□□□□ -0.71
CTNNA1-230ENST00000521724 TLR10Q9BXR5 811 aa10.61□□□□□ -0.71
CTNNA1-230ENST00000521724 PPP1R1BQ9UD71 204 aaPredicted RBP10.61□□□□□ -0.71
CTNNA1-230ENST00000521724 SLC12A6Q9UHW9 1150 aa10.61□□□□□ -0.71
CTNNA1-230ENST00000521724 TACC3Q9Y6A5 838 aa10.61□□□□□ -0.71
CTNNA1-230ENST00000521724 RASSF10A6NK89 507 aa10.6□□□□□ -0.71
CTNNA1-230ENST00000521724 PSMA7O14818 248 aa10.6□□□□□ -0.71
CTNNA1-230ENST00000521724 MARCH6O60337 910 aa10.6□□□□□ -0.71
CTNNA1-230ENST00000521724 DNA2P51530 1060 aa10.6□□□□□ -0.71
CTNNA1-230ENST00000521724 KIF11P52732 1056 aa10.6□□□□□ -0.71
CTNNA1-230ENST00000521724 INHBEP58166 350 aa10.6□□□□□ -0.71
CTNNA1-230ENST00000521724 CCDC155Q8N6L0 562 aa10.6□□□□□ -0.71
CTNNA1-230ENST00000521724 FANCBQ8NB91 859 aa10.6□□□□□ -0.71
CTNNA1-230ENST00000521724 CCT6BQ92526 530 aa10.6□□□□□ -0.71
CTNNA1-230ENST00000521724 SAAL1Q96ER3 474 aa10.6□□□□□ -0.71
CTNNA1-230ENST00000521724 KRT12Q99456 494 aa10.6□□□□□ -0.71
CTNNA1-230ENST00000521724 ZPR1O75312 459 aa10.6□□□□□ -0.71
CTNNA1-230ENST00000521724 TRADDQ15628 312 aa10.6□□□□□ -0.71
CTNNA1-230ENST00000521724 TTC38Q5R3I4 469 aa10.6□□□□□ -0.71
CTNNA1-230ENST00000521724 PNMA8AQ86V59 439 aaPredicted RBP10.6□□□□□ -0.71
CTNNA1-230ENST00000521724 CSGALNACT2Q8N6G5 542 aa10.6□□□□□ -0.71
CTNNA1-230ENST00000521724 ZCRB1Q8TBF4 217 aaKnown RBP10.6□□□□□ -0.71
CTNNA1-230ENST00000521724 TCP11Q8WWU5 503 aa10.6□□□□□ -0.71
CTNNA1-230ENST00000521724 CASKIN2Q8WXE0 1202 aa10.6□□□□□ -0.71
CTNNA1-230ENST00000521724 NAPBQ9H115 298 aa10.6□□□□□ -0.71
CTNNA1-230ENST00000521724 CNNM2Q9H8M5 875 aa10.6□□□□□ -0.71
CTNNA1-230ENST00000521724 EBF2Q9HAK2 575 aa10.6□□□□□ -0.71
CTNNA1-230ENST00000521724 RNF14Q9UBS8 474 aa10.6□□□□□ -0.71
CTNNA1-230ENST00000521724 PLAGL2Q9UPG8 496 aa10.6□□□□□ -0.71
CTNNA1-230ENST00000521724 IVNS1ABPQ9Y6Y0 642 aa10.6□□□□□ -0.71
CTNNA1-230ENST00000521724 LAMB4A4D0S4 1761 aa10.6□□□□□ -0.71
CTNNA1-230ENST00000521724 PHF20L1A8MW92 1017 aa10.59□□□□□ -0.71
CTNNA1-230ENST00000521724 SNAP23O00161 211 aa10.59□□□□□ -0.71
CTNNA1-230ENST00000521724 BUB1O43683 1085 aa10.59□□□□□ -0.71
CTNNA1-230ENST00000521724 CLTAP09496 248 aa10.59□□□□□ -0.71
CTNNA1-230ENST00000521724 CTNNA1P35221 906 aaKnown RBP10.59□□□□□ -0.71
CTNNA1-230ENST00000521724 HSPA9P38646 679 aaKnown RBP10.59□□□□□ -0.71
CTNNA1-230ENST00000521724 MFSD6Q6ZSS7 791 aa10.59□□□□□ -0.71
CTNNA1-230ENST00000521724 OR2W6PQ8NHA6 318 aa10.59□□□□□ -0.71
CTNNA1-230ENST00000521724 TATDN2Q93075 761 aa10.59□□□□□ -0.71
CTNNA1-230ENST00000521724 SPAG5Q96R06 1193 aa10.59□□□□□ -0.71
CTNNA1-230ENST00000521724 PLCB1Q9NQ66 1216 aa10.59□□□□□ -0.71
CTNNA1-230ENST00000521724 PIH1D3Q9NQM4 214 aaKnown RBP10.59□□□□□ -0.71
CTNNA1-230ENST00000521724 ARHGAP20Q9P2F6 1191 aa10.59□□□□□ -0.71
CTNNA1-230ENST00000521724 NUP188Q5SRE5 1749 aa10.59□□□□□ -0.71
CTNNA1-230ENST00000521724 EME2A4GXA9 379 aaPredicted RBP10.59□□□□□ -0.71
CTNNA1-230ENST00000521724 ANP32DO95626 131 aa10.59□□□□□ -0.71
CTNNA1-230ENST00000521724 EIF4A3P38919 411 aaKnown RBP10.59□□□□□ -0.71
CTNNA1-230ENST00000521724 MTIF2P46199 727 aaKnown RBP10.59□□□□□ -0.71
CTNNA1-230ENST00000521724 PPP2R2AP63151 447 aa10.59□□□□□ -0.71
CTNNA1-230ENST00000521724 ICA1Q05084 483 aa10.59□□□□□ -0.71
CTNNA1-230ENST00000521724 TCIRG1Q13488 830 aa10.59□□□□□ -0.71
CTNNA1-230ENST00000521724 BIRC3Q13489 604 aa10.59□□□□□ -0.71
CTNNA1-230ENST00000521724 KCNB1Q14721 858 aa10.59□□□□□ -0.71
CTNNA1-230ENST00000521724 HLFQ16534 295 aa10.59□□□□□ -0.71
CTNNA1-230ENST00000521724 CAPRIN2Q6IMN6 1127 aaKnown RBP10.59□□□□□ -0.71
CTNNA1-230ENST00000521724 CRELD2Q6UXH1 353 aaPredicted RBP10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms