RNA–Protein interactions for RNA: ENST00000521700.5

TRAPPC9-211, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-211ENST00000521700 GNAQP50148 359 aa20.72■□□□□ 0.91
TRAPPC9-211ENST00000521700 MDM2Q00987 491 aaPredicted RBP20.72■□□□□ 0.91
TRAPPC9-211ENST00000521700 KRT32Q14532 448 aa20.72■□□□□ 0.91
TRAPPC9-211ENST00000521700 FSCN1Q16658 493 aaKnown RBP20.72■□□□□ 0.91
TRAPPC9-211ENST00000521700 SH3RF1Q7Z6J0 888 aa20.72■□□□□ 0.91
TRAPPC9-211ENST00000521700 RAB11FIP4Q86YS3 637 aa20.72■□□□□ 0.91
TRAPPC9-211ENST00000521700 SRBD1Q8N5C6 995 aaKnown RBP20.72■□□□□ 0.91
TRAPPC9-211ENST00000521700 LZTS2Q9BRK4 669 aa20.72■□□□□ 0.91
TRAPPC9-211ENST00000521700 MAP3K20Q9NYL2 800 aaKnown RBP20.72■□□□□ 0.91
TRAPPC9-211ENST00000521700 PRKAG2Q9UGJ0 569 aa20.72■□□□□ 0.91
TRAPPC9-211ENST00000521700 A0A1W2PPC1 479 aa20.71■□□□□ 0.91
TRAPPC9-211ENST00000521700 PQBP1O60828 265 aaKnown RBP20.71■□□□□ 0.91
TRAPPC9-211ENST00000521700 HSPA4P34932 840 aa20.71■□□□□ 0.91
TRAPPC9-211ENST00000521700 ARHGEF16Q5VV41 709 aa20.71■□□□□ 0.91
TRAPPC9-211ENST00000521700 CXCL17Q6UXB2 119 aa20.71■□□□□ 0.91
TRAPPC9-211ENST00000521700 CMTR1Q8N1G2 835 aaKnown RBP20.71■□□□□ 0.91
TRAPPC9-211ENST00000521700 SAMD3Q8N6K7 520 aa20.71■□□□□ 0.91
TRAPPC9-211ENST00000521700 FANCBQ8NB91 859 aa20.71■□□□□ 0.91
TRAPPC9-211ENST00000521700 SCFD2Q8WU76 684 aa20.71■□□□□ 0.91
TRAPPC9-211ENST00000521700 VTI1AQ96AJ9 217 aa20.71■□□□□ 0.91
TRAPPC9-211ENST00000521700 IWS1Q96ST2 819 aa20.71■□□□□ 0.91
TRAPPC9-211ENST00000521700 PRDM5Q9NQX1 630 aaPredicted RBP20.71■□□□□ 0.91
TRAPPC9-211ENST00000521700 PDLIM7Q9NR12 457 aa20.71■□□□□ 0.91
TRAPPC9-211ENST00000521700 RANBP2P49792 3224 aaKnown RBP20.71■□□□□ 0.91
TRAPPC9-211ENST00000521700 TRIM43BA6NCK2 446 aa20.7■□□□□ 0.9
TRAPPC9-211ENST00000521700 EIF2AK2P19525 551 aaKnown RBP20.7■□□□□ 0.9
TRAPPC9-211ENST00000521700 HOXA13P31271 388 aaPredicted RBP20.7■□□□□ 0.9
TRAPPC9-211ENST00000521700 CDK7P50613 346 aa20.7■□□□□ 0.9
TRAPPC9-211ENST00000521700 STXBP2Q15833 593 aa20.7■□□□□ 0.9
TRAPPC9-211ENST00000521700 ANKRD33Q7Z3H0 272 aa20.7■□□□□ 0.9
TRAPPC9-211ENST00000521700 TRIM43Q96BQ3 446 aaPredicted RBP20.7■□□□□ 0.9
TRAPPC9-211ENST00000521700 RRP36Q96EU6 259 aaKnown RBP20.7■□□□□ 0.9
TRAPPC9-211ENST00000521700 TOX2Q96NM4 488 aa20.7■□□□□ 0.9
TRAPPC9-211ENST00000521700 UBE2OQ9C0C9 1292 aaKnown RBP20.7■□□□□ 0.9
TRAPPC9-211ENST00000521700 PXMP2Q9NR77 195 aa20.7■□□□□ 0.9
TRAPPC9-211ENST00000521700 GCOM1H8Y6P7 765 aaPredicted RBP20.69■□□□□ 0.9
TRAPPC9-211ENST00000521700 ZEB2O60315 1214 aa20.69■□□□□ 0.9
TRAPPC9-211ENST00000521700 REC8O95072 547 aa20.69■□□□□ 0.9
TRAPPC9-211ENST00000521700 NR3C2P08235 984 aa20.69■□□□□ 0.9
TRAPPC9-211ENST00000521700 CLTBP09497 229 aa20.69■□□□□ 0.9
TRAPPC9-211ENST00000521700 POLR2MP0CAP2 368 aa20.69■□□□□ 0.9
TRAPPC9-211ENST00000521700 TXNP10599 105 aaKnown RBP20.69■□□□□ 0.9
TRAPPC9-211ENST00000521700 PPP2R5BQ15173 497 aa20.69■□□□□ 0.9
TRAPPC9-211ENST00000521700 COPS5Q92905 334 aa20.69■□□□□ 0.9
TRAPPC9-211ENST00000521700 LBHD1Q9BQE6 289 aaPredicted RBP20.69■□□□□ 0.9
TRAPPC9-211ENST00000521700 BRPF3Q9ULD4 1205 aa20.69■□□□□ 0.9
TRAPPC9-211ENST00000521700 SNX14Q9Y5W7 946 aa20.69■□□□□ 0.9
TRAPPC9-211ENST00000521700 A0A0U1RQG5 324 aaPredicted RBP20.68■□□□□ 0.9
TRAPPC9-211ENST00000521700 ARVCFO00192 962 aa20.68■□□□□ 0.9
TRAPPC9-211ENST00000521700 NKRFO15226 690 aaKnown RBP eCLIP20.68■□□□□ 0.9
TRAPPC9-211ENST00000521700 CABYRO75952 493 aa20.68■□□□□ 0.9
TRAPPC9-211ENST00000521700 ARIH2O95376 493 aa20.68■□□□□ 0.9
TRAPPC9-211ENST00000521700 HMGB1P09429 215 aaKnown RBP20.68■□□□□ 0.9
TRAPPC9-211ENST00000521700 CPA1P15085 419 aa20.68■□□□□ 0.9
TRAPPC9-211ENST00000521700 FAAP100Q0VG06 881 aa20.68■□□□□ 0.9
TRAPPC9-211ENST00000521700 TTLL4Q14679 1199 aa20.68■□□□□ 0.9
TRAPPC9-211ENST00000521700 CCDC62Q6P9F0 684 aa20.68■□□□□ 0.9
TRAPPC9-211ENST00000521700 APOA5Q6Q788 366 aa20.68■□□□□ 0.9
TRAPPC9-211ENST00000521700 SYNE3Q6ZMZ3 975 aa20.68■□□□□ 0.9
TRAPPC9-211ENST00000521700 SEPT14Q6ZU15 432 aa20.68■□□□□ 0.9
TRAPPC9-211ENST00000521700 MICU3Q86XE3 530 aa20.68■□□□□ 0.9
TRAPPC9-211ENST00000521700 OR6J1Q8NGC5 347 aa20.68■□□□□ 0.9
TRAPPC9-211ENST00000521700 LTBP2Q14767 1821 aa20.67■□□□□ 0.9
TRAPPC9-211ENST00000521700 DCDC2CA8MYV0 355 aa20.67■□□□□ 0.9
TRAPPC9-211ENST00000521700 EIF3JO75822 258 aaKnown RBP20.67■□□□□ 0.9
TRAPPC9-211ENST00000521700 TMTC3Q6ZXV5 915 aa20.67■□□□□ 0.9
TRAPPC9-211ENST00000521700 CCDC82Q8N4S0 544 aa20.67■□□□□ 0.9
TRAPPC9-211ENST00000521700 PDCD2LQ9BRP1 358 aa20.67■□□□□ 0.9
TRAPPC9-211ENST00000521700 SEC63Q9UGP8 760 aaKnown RBP20.67■□□□□ 0.9
TRAPPC9-211ENST00000521700 KIAA1217Q5T5P2 1943 aa20.66■□□□□ 0.9
TRAPPC9-211ENST00000521700 KIAA0355O15063 1070 aa20.66■□□□□ 0.9
TRAPPC9-211ENST00000521700 ITGB8P26012 769 aa20.66■□□□□ 0.9
TRAPPC9-211ENST00000521700 FCHSD1Q86WN1 690 aa20.66■□□□□ 0.9
TRAPPC9-211ENST00000521700 SLC43A3Q8NBI5 491 aa20.66■□□□□ 0.9
TRAPPC9-211ENST00000521700 BADQ92934 168 aa20.66■□□□□ 0.9
TRAPPC9-211ENST00000521700 JAKMIP1Q96N16 626 aaKnown RBP20.66■□□□□ 0.9
TRAPPC9-211ENST00000521700 TMEM39AQ9NV64 488 aa20.66■□□□□ 0.9
TRAPPC9-211ENST00000521700 GRIN2DO15399 1336 aa20.66■□□□□ 0.9
TRAPPC9-211ENST00000521700 MROH7Q68CQ1 1323 aa20.65■□□□□ 0.9
TRAPPC9-211ENST00000521700 hCG_1642624A0A1W2PR95 340 aa20.65■□□□□ 0.9
TRAPPC9-211ENST00000521700 ZBTB43O43298 467 aa20.65■□□□□ 0.9
TRAPPC9-211ENST00000521700 MYCLP12524 364 aaPredicted RBP20.65■□□□□ 0.9
TRAPPC9-211ENST00000521700 CPT1AP50416 773 aa20.65■□□□□ 0.9
TRAPPC9-211ENST00000521700 ITGA7Q13683 1181 aa20.65■□□□□ 0.9
TRAPPC9-211ENST00000521700 PGM5Q15124 567 aa20.65■□□□□ 0.9
TRAPPC9-211ENST00000521700 LY6KQ17RY6 165 aa20.65■□□□□ 0.9
TRAPPC9-211ENST00000521700 VSIG10LQ86VR7 867 aa20.65■□□□□ 0.9
TRAPPC9-211ENST00000521700 TDHQ8IZJ6 230 aa20.65■□□□□ 0.9
TRAPPC9-211ENST00000521700 IL31RAQ8NI17 732 aa20.65■□□□□ 0.9
TRAPPC9-211ENST00000521700 KLF18A0A0U1RQI7 1052 aa20.64■□□□□ 0.89
TRAPPC9-211ENST00000521700 A6NJR5 290 aa20.64■□□□□ 0.89
TRAPPC9-211ENST00000521700 PSMC6P62333 389 aa20.64■□□□□ 0.89
TRAPPC9-211ENST00000521700 PURAQ00577 322 aaKnown RBP20.64■□□□□ 0.89
TRAPPC9-211ENST00000521700 BLOC1S2Q6QNY1 142 aa20.64■□□□□ 0.89
TRAPPC9-211ENST00000521700 FAM126BQ8IXS8 530 aa20.64■□□□□ 0.89
TRAPPC9-211ENST00000521700 POLR3EQ9NVU0 708 aa20.64■□□□□ 0.89
TRAPPC9-211ENST00000521700 RBM28Q9NW13 759 aaKnown RBP20.64■□□□□ 0.89
TRAPPC9-211ENST00000521700 DDX41Q9UJV9 622 aaKnown RBP20.64■□□□□ 0.89
TRAPPC9-211ENST00000521700 SOX1O00570 391 aaPredicted RBP20.63■□□□□ 0.89
TRAPPC9-211ENST00000521700 EPB41L2O43491 1005 aaKnown RBP20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms