RNA–Protein interactions for RNA: ENST00000519486.5

SLIT3-205, Transcript of slit guidance ligand 3, humanhuman

TSL 1 (best)

Gene SLIT3, Length 4,228 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT3-205ENST00000519486 CHURC1Q8WUH1 139 aa8.62□□□□□ -1.03
SLIT3-205ENST00000519486 IRAK4Q9NWZ3 460 aa8.62□□□□□ -1.03
SLIT3-205ENST00000519486 KBTBD13C9JR72 458 aa8.62□□□□□ -1.03
SLIT3-205ENST00000519486 OPA1O60313 960 aa8.62□□□□□ -1.03
SLIT3-205ENST00000519486 PLEKHA8P1O95397 391 aa8.62□□□□□ -1.03
SLIT3-205ENST00000519486 HSPA1AP0DMV8 641 aaKnown RBP8.62□□□□□ -1.03
SLIT3-205ENST00000519486 HSPA1BP0DMV9 641 aaKnown RBP8.62□□□□□ -1.03
SLIT3-205ENST00000519486 ELF1P32519 619 aa8.62□□□□□ -1.03
SLIT3-205ENST00000519486 RESP18Q5W5W9 173 aa8.62□□□□□ -1.03
SLIT3-205ENST00000519486 ARMCX5Q6P1M9 558 aa8.62□□□□□ -1.03
SLIT3-205ENST00000519486 GLIS2Q9BZE0 524 aaPredicted RBP8.62□□□□□ -1.03
SLIT3-205ENST00000519486 USO1O60763 962 aaKnown RBP8.62□□□□□ -1.03
SLIT3-205ENST00000519486 CSF1RP07333 972 aa8.62□□□□□ -1.03
SLIT3-205ENST00000519486 GOLGA8HP0CJ92 632 aa8.62□□□□□ -1.03
SLIT3-205ENST00000519486 DDR1Q08345 913 aa8.62□□□□□ -1.03
SLIT3-205ENST00000519486 TBC1D8BQ0IIM8 1120 aa8.62□□□□□ -1.03
SLIT3-205ENST00000519486 ZYXQ15942 572 aaKnown RBP8.62□□□□□ -1.03
SLIT3-205ENST00000519486 NBPF20Q3BBV1 942 aa8.62□□□□□ -1.03
SLIT3-205ENST00000519486 CCDC40Q4G0X9 1142 aa8.62□□□□□ -1.03
SLIT3-205ENST00000519486 FAM47CQ5HY64 1035 aa8.62□□□□□ -1.03
SLIT3-205ENST00000519486 ARMC2Q8NEN0 867 aa8.62□□□□□ -1.03
SLIT3-205ENST00000519486 TBC1D16Q8TBP0 767 aa8.62□□□□□ -1.03
SLIT3-205ENST00000519486 TGFBRAP1Q8WUH2 860 aa8.62□□□□□ -1.03
SLIT3-205ENST00000519486 NELFBQ8WX92 580 aa8.62□□□□□ -1.03
SLIT3-205ENST00000519486 RNF26Q9BY78 433 aaPredicted RBP8.62□□□□□ -1.03
SLIT3-205ENST00000519486 CREBZFQ9NS37 354 aa8.62□□□□□ -1.03
SLIT3-205ENST00000519486 BAZ2BQ9UIF8 2168 aaKnown RBP8.62□□□□□ -1.03
SLIT3-205ENST00000519486 A6NNZ2 444 aa8.61□□□□□ -1.03
SLIT3-205ENST00000519486 ATP2C2O75185 946 aa8.61□□□□□ -1.03
SLIT3-205ENST00000519486 PLCD1P51178 756 aa8.61□□□□□ -1.03
SLIT3-205ENST00000519486 PKN2Q16513 984 aaKnown RBP8.61□□□□□ -1.03
SLIT3-205ENST00000519486 TUBB8Q3ZCM7 444 aa8.61□□□□□ -1.03
SLIT3-205ENST00000519486 VSTM4Q8IW00 320 aa8.61□□□□□ -1.03
SLIT3-205ENST00000519486 C6orf50Q9HD87 102 aa8.61□□□□□ -1.03
SLIT3-205ENST00000519486 CD209Q9NNX6 404 aa8.61□□□□□ -1.03
SLIT3-205ENST00000519486 LUC7LQ9NQ29 371 aaKnown RBP8.61□□□□□ -1.03
SLIT3-205ENST00000519486 STRCQ7RTU9 1775 aa8.61□□□□□ -1.03
SLIT3-205ENST00000519486 NRXN3Q9Y4C0 1643 aa8.61□□□□□ -1.03
SLIT3-205ENST00000519486 SCG2P13521 617 aa8.61□□□□□ -1.03
SLIT3-205ENST00000519486 PTPREP23469 700 aa8.61□□□□□ -1.03
SLIT3-205ENST00000519486 CYLC1P35663 651 aaPredicted RBP8.61□□□□□ -1.03
SLIT3-205ENST00000519486 PDE4DQ08499 809 aa8.61□□□□□ -1.03
SLIT3-205ENST00000519486 INF2Q27J81 1249 aa8.61□□□□□ -1.03
SLIT3-205ENST00000519486 CCDC122Q5T0U0 273 aa8.61□□□□□ -1.03
SLIT3-205ENST00000519486 SWT1Q5T5J6 900 aaKnown RBP8.61□□□□□ -1.03
SLIT3-205ENST00000519486 SPATA1Q5VX52 437 aa8.61□□□□□ -1.03
SLIT3-205ENST00000519486 NCAPG2Q86XI2 1143 aa8.61□□□□□ -1.03
SLIT3-205ENST00000519486 EGFL6Q8IUX8 553 aa8.61□□□□□ -1.03
SLIT3-205ENST00000519486 PNMA1Q8ND90 353 aa8.61□□□□□ -1.03
SLIT3-205ENST00000519486 IGDCC4Q8TDY8 1250 aa8.61□□□□□ -1.03
SLIT3-205ENST00000519486 CCDC17Q96LX7 622 aa8.61□□□□□ -1.03
SLIT3-205ENST00000519486 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.61□□□□□ -1.03
SLIT3-205ENST00000519486 ELP3Q9H9T3 547 aa8.61□□□□□ -1.03
SLIT3-205ENST00000519486 FAM169AQ9Y6X4 670 aa8.61□□□□□ -1.03
SLIT3-205ENST00000519486 CASP14P31944 242 aa8.61□□□□□ -1.03
SLIT3-205ENST00000519486 TXKP42681 527 aa8.61□□□□□ -1.03
SLIT3-205ENST00000519486 CCZ1BP86790 482 aa8.61□□□□□ -1.03
SLIT3-205ENST00000519486 CCZ1P86791 482 aaPredicted RBP8.61□□□□□ -1.03
SLIT3-205ENST00000519486 ODF2Q5BJF6 829 aa8.61□□□□□ -1.03
SLIT3-205ENST00000519486 NYAP1Q6ZVC0 841 aa8.61□□□□□ -1.03
SLIT3-205ENST00000519486 SAMD7Q7Z3H4 446 aa8.61□□□□□ -1.03
SLIT3-205ENST00000519486 CSGALNACT2Q8N6G5 542 aa8.61□□□□□ -1.03
SLIT3-205ENST00000519486 MICAL1Q8TDZ2 1067 aa8.61□□□□□ -1.03
SLIT3-205ENST00000519486 TSG101Q99816 390 aa8.61□□□□□ -1.03
SLIT3-205ENST00000519486 OSBPL5Q9H0X9 879 aaPredicted RBP8.61□□□□□ -1.03
SLIT3-205ENST00000519486 ZNF446Q9NWS9 450 aa8.61□□□□□ -1.03
SLIT3-205ENST00000519486 GPRC5DQ9NZD1 345 aa8.61□□□□□ -1.03
SLIT3-205ENST00000519486 MACROD2A1Z1Q3 448 aa8.6□□□□□ -1.03
SLIT3-205ENST00000519486 M0QZ92 97 aa8.6□□□□□ -1.03
SLIT3-205ENST00000519486 STX10O60499 249 aa8.6□□□□□ -1.03
SLIT3-205ENST00000519486 CCNT1O60563 726 aaKnown RBP8.6□□□□□ -1.03
SLIT3-205ENST00000519486 GPSM2P81274 684 aa8.6□□□□□ -1.03
SLIT3-205ENST00000519486 ARID5AQ03989 594 aa8.6□□□□□ -1.03
SLIT3-205ENST00000519486 TUBB2AQ13885 445 aa8.6□□□□□ -1.03
SLIT3-205ENST00000519486 RBM43Q6ZSC3 357 aaKnown RBP8.6□□□□□ -1.03
SLIT3-205ENST00000519486 USP49Q70CQ1 688 aa8.6□□□□□ -1.03
SLIT3-205ENST00000519486 METTL16Q86W50 562 aaKnown RBP8.6□□□□□ -1.03
SLIT3-205ENST00000519486 FAM114A1Q8IWE2 563 aa8.6□□□□□ -1.03
SLIT3-205ENST00000519486 RPUSD2Q8IZ73 545 aaKnown RBP8.6□□□□□ -1.03
SLIT3-205ENST00000519486 TRIML1Q8N9V2 468 aa8.6□□□□□ -1.03
SLIT3-205ENST00000519486 PPP2R3CQ969Q6 453 aa8.6□□□□□ -1.03
SLIT3-205ENST00000519486 RRP36Q96EU6 259 aaKnown RBP8.6□□□□□ -1.03
SLIT3-205ENST00000519486 CCDC42Q96M95 316 aa8.6□□□□□ -1.03
SLIT3-205ENST00000519486 SH3GL3Q99963 347 aa8.6□□□□□ -1.03
SLIT3-205ENST00000519486 TUBB2BQ9BVA1 445 aa8.6□□□□□ -1.03
SLIT3-205ENST00000519486 SRPRBQ9Y5M8 271 aaKnown RBP8.6□□□□□ -1.03
SLIT3-205ENST00000519486 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.6□□□□□ -1.03
SLIT3-205ENST00000519486 CHD2O14647 1828 aaKnown RBP8.6□□□□□ -1.03
SLIT3-205ENST00000519486 MROH7-TTC4A0A0A0MT08 1334 aa8.6□□□□□ -1.03
SLIT3-205ENST00000519486 FAM205CA6NFA0 338 aa8.6□□□□□ -1.03
SLIT3-205ENST00000519486 TADA3O75528 432 aa8.6□□□□□ -1.03
SLIT3-205ENST00000519486 CRKP46108 304 aa8.6□□□□□ -1.03
SLIT3-205ENST00000519486 TMED8Q6PL24 325 aaPredicted RBP8.6□□□□□ -1.03
SLIT3-205ENST00000519486 FOXP4Q8IVH2 680 aaPredicted RBP8.6□□□□□ -1.03
SLIT3-205ENST00000519486 EPC1Q9H2F5 836 aa8.6□□□□□ -1.03
SLIT3-205ENST00000519486 SUDS3Q9H7L9 328 aaPredicted RBP8.6□□□□□ -1.03
SLIT3-205ENST00000519486 TMCO5BA8MYB1 307 aa8.6□□□□□ -1.03
SLIT3-205ENST00000519486 NMT2O60551 498 aa8.6□□□□□ -1.03
SLIT3-205ENST00000519486 GNA11P29992 359 aa8.6□□□□□ -1.03
SLIT3-205ENST00000519486 HNRNPH1P31943 449 aaKnown RBP8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms