RNA–Protein interactions for RNA: ENST00000519436.1

ARFGEF1-206, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARFGEF1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-206ENST00000519436 CREB3L3Q68CJ9 461 aa24.69■■□□□ 1.54
ARFGEF1-206ENST00000519436 COPS5Q92905 334 aa24.69■■□□□ 1.54
ARFGEF1-206ENST00000519436 PIGSQ96S52 555 aa24.69■■□□□ 1.54
ARFGEF1-206ENST00000519436 IWS1Q96ST2 819 aa24.69■■□□□ 1.54
ARFGEF1-206ENST00000519436 RMDN3Q96TC7 470 aa24.69■■□□□ 1.54
ARFGEF1-206ENST00000519436 SEZ6LQ9BYH1 1024 aa24.69■■□□□ 1.54
ARFGEF1-206ENST00000519436 PCDHA1Q9Y5I3 950 aa24.69■■□□□ 1.54
ARFGEF1-206ENST00000519436 PPP2R5BQ15173 497 aa24.68■■□□□ 1.54
ARFGEF1-206ENST00000519436 MFSD5Q6N075 450 aa24.68■■□□□ 1.54
ARFGEF1-206ENST00000519436 Q7L0L9 218 aa24.68■■□□□ 1.54
ARFGEF1-206ENST00000519436 CATIPQ7Z7H3 387 aa24.68■■□□□ 1.54
ARFGEF1-206ENST00000519436 MAP3K14Q99558 947 aa24.68■■□□□ 1.54
ARFGEF1-206ENST00000519436 MAP3K20Q9NYL2 800 aaKnown RBP24.68■■□□□ 1.54
ARFGEF1-206ENST00000519436 LAMA2P24043 3122 aaKnown RBP24.68■■□□□ 1.54
ARFGEF1-206ENST00000519436 PRC1O43663 620 aa24.67■■□□□ 1.54
ARFGEF1-206ENST00000519436 CFBP00751 764 aa24.67■■□□□ 1.54
ARFGEF1-206ENST00000519436 TXNP10599 105 aaKnown RBP24.67■■□□□ 1.54
ARFGEF1-206ENST00000519436 PSMC6P62333 389 aa24.67■■□□□ 1.54
ARFGEF1-206ENST00000519436 PURAQ00577 322 aaKnown RBP24.67■■□□□ 1.54
ARFGEF1-206ENST00000519436 FPGSQ05932 587 aa24.67■■□□□ 1.54
ARFGEF1-206ENST00000519436 DEFB123Q8N688 67 aa24.67■■□□□ 1.54
ARFGEF1-206ENST00000519436 OR6J1Q8NGC5 347 aa24.67■■□□□ 1.54
ARFGEF1-206ENST00000519436 PNMA6FA0A0J9YX94 578 aa24.66■■□□□ 1.54
ARFGEF1-206ENST00000519436 A6NJR5 290 aa24.66■■□□□ 1.54
ARFGEF1-206ENST00000519436 CPT1AP50416 773 aa24.66■■□□□ 1.54
ARFGEF1-206ENST00000519436 TTLL4Q14679 1199 aa24.66■■□□□ 1.54
ARFGEF1-206ENST00000519436 STXBP2Q15833 593 aa24.66■■□□□ 1.54
ARFGEF1-206ENST00000519436 HOMER1Q86YM7 354 aa24.66■■□□□ 1.54
ARFGEF1-206ENST00000519436 SAMD3Q8N6K7 520 aa24.66■■□□□ 1.54
ARFGEF1-206ENST00000519436 PXMP2Q9NR77 195 aa24.66■■□□□ 1.54
ARFGEF1-206ENST00000519436 POLR3EQ9NVU0 708 aa24.66■■□□□ 1.54
ARFGEF1-206ENST00000519436 SH2B2O14492 632 aaPredicted RBP24.65■■□□□ 1.54
ARFGEF1-206ENST00000519436 TLR3O15455 904 aaKnown RBP24.65■■□□□ 1.54
ARFGEF1-206ENST00000519436 MCM5P33992 734 aa24.65■■□□□ 1.54
ARFGEF1-206ENST00000519436 ARHGEF16Q5VV41 709 aa24.65■■□□□ 1.54
ARFGEF1-206ENST00000519436 FAM109BQ6ICB4 259 aaPredicted RBP24.65■■□□□ 1.54
ARFGEF1-206ENST00000519436 C16orf59Q7L2K0 433 aa24.65■■□□□ 1.54
ARFGEF1-206ENST00000519436 ZNF654Q8IZM8 581 aa24.65■■□□□ 1.54
ARFGEF1-206ENST00000519436 ANO2Q9NQ90 1003 aa24.65■■□□□ 1.54
ARFGEF1-206ENST00000519436 MTMR10Q9NXD2 777 aa24.65■■□□□ 1.54
ARFGEF1-206ENST00000519436 EIF3JO75822 258 aaKnown RBP24.64■■□□□ 1.54
ARFGEF1-206ENST00000519436 DDAH1O94760 285 aa24.64■■□□□ 1.54
ARFGEF1-206ENST00000519436 NR3C2P08235 984 aa24.64■■□□□ 1.54
ARFGEF1-206ENST00000519436 EIF2AK2P19525 551 aaKnown RBP24.64■■□□□ 1.54
ARFGEF1-206ENST00000519436 SEPT14Q6ZU15 432 aa24.64■■□□□ 1.54
ARFGEF1-206ENST00000519436 TMTC2Q8N394 836 aa24.64■■□□□ 1.54
ARFGEF1-206ENST00000519436 TMEM87BQ96K49 555 aa24.64■■□□□ 1.54
ARFGEF1-206ENST00000519436 MTG1Q9BT17 334 aaPredicted RBP24.64■■□□□ 1.54
ARFGEF1-206ENST00000519436 TRPV6Q9H1D0 765 aa24.64■■□□□ 1.54
ARFGEF1-206ENST00000519436 B4GALT4O60513 344 aa24.63■■□□□ 1.53
ARFGEF1-206ENST00000519436 SMARCA1P28370 1054 aa24.63■■□□□ 1.53
ARFGEF1-206ENST00000519436 LIFRP42702 1097 aa24.63■■□□□ 1.53
ARFGEF1-206ENST00000519436 TRAF1Q13077 416 aa24.63■■□□□ 1.53
ARFGEF1-206ENST00000519436 LY6KQ17RY6 165 aa24.63■■□□□ 1.53
ARFGEF1-206ENST00000519436 CASC1Q6TDU7 716 aa24.63■■□□□ 1.53
ARFGEF1-206ENST00000519436 MYL10Q9BUA6 226 aa24.63■■□□□ 1.53
ARFGEF1-206ENST00000519436 DDX41Q9UJV9 622 aaKnown RBP24.63■■□□□ 1.53
ARFGEF1-206ENST00000519436 BAZ2BQ9UIF8 2168 aaKnown RBP24.62■■□□□ 1.53
ARFGEF1-206ENST00000519436 KPNA6O60684 536 aa24.62■■□□□ 1.53
ARFGEF1-206ENST00000519436 MYL3P08590 195 aa24.62■■□□□ 1.53
ARFGEF1-206ENST00000519436 HOXA13P31271 388 aaPredicted RBP24.62■■□□□ 1.53
ARFGEF1-206ENST00000519436 ARHGAP1Q07960 439 aa24.62■■□□□ 1.53
ARFGEF1-206ENST00000519436 PDCD2LQ9BRP1 358 aa24.62■■□□□ 1.53
ARFGEF1-206ENST00000519436 SPZ1Q9BXG8 430 aa24.62■■□□□ 1.53
ARFGEF1-206ENST00000519436 PPP1R12CQ9BZL4 782 aa24.62■■□□□ 1.53
ARFGEF1-206ENST00000519436 ALDH8A1Q9H2A2 487 aaPredicted RBP24.62■■□□□ 1.53
ARFGEF1-206ENST00000519436 RGS20O76081 388 aa24.61■■□□□ 1.53
ARFGEF1-206ENST00000519436 CSF2RAP15509 400 aa24.61■■□□□ 1.53
ARFGEF1-206ENST00000519436 CYP2C18P33260 490 aa24.61■■□□□ 1.53
ARFGEF1-206ENST00000519436 BRDTQ58F21 947 aaPredicted RBP24.61■■□□□ 1.53
ARFGEF1-206ENST00000519436 VSIG10LQ86VR7 867 aa24.61■■□□□ 1.53
ARFGEF1-206ENST00000519436 BUD13Q9BRD0 619 aaKnown RBP eCLIP24.61■■□□□ 1.53
ARFGEF1-206ENST00000519436 GCOM1H8Y6P7 765 aaPredicted RBP24.6■■□□□ 1.53
ARFGEF1-206ENST00000519436 POLR2MP0CAP2 368 aa24.6■■□□□ 1.53
ARFGEF1-206ENST00000519436 SMAD3P84022 425 aaKnown RBP24.6■■□□□ 1.53
ARFGEF1-206ENST00000519436 PPIGQ13427 754 aaKnown RBP eCLIP24.6■■□□□ 1.538e-11■■□□□ 13.1
ARFGEF1-206ENST00000519436 NBPF20Q3BBV1 942 aa24.6■■□□□ 1.53
ARFGEF1-206ENST00000519436 TSGA10IPQ3SY00 556 aa24.6■■□□□ 1.53
ARFGEF1-206ENST00000519436 TMEM240Q5SV17 173 aa24.6■■□□□ 1.53
ARFGEF1-206ENST00000519436 TMEM199Q8N511 208 aa24.6■■□□□ 1.53
ARFGEF1-206ENST00000519436 CTCFLQ8NI51 663 aaPredicted RBP24.6■■□□□ 1.53
ARFGEF1-206ENST00000519436 AFG1LQ8WV93 481 aa24.6■■□□□ 1.53
ARFGEF1-206ENST00000519436 RNPC3Q96LT9 517 aaKnown RBP24.6■■□□□ 1.53
ARFGEF1-206ENST00000519436 LZTS2Q9BRK4 669 aa24.6■■□□□ 1.53
ARFGEF1-206ENST00000519436 NOC4LQ9BVI4 516 aaKnown RBP24.6■■□□□ 1.53
ARFGEF1-206ENST00000519436 UMODL1Q5DID0 1318 aa24.6■■□□□ 1.53
ARFGEF1-206ENST00000519436 GH1P01241 217 aa24.59■■□□□ 1.53
ARFGEF1-206ENST00000519436 KIF5BP33176 963 aa24.59■■□□□ 1.53
ARFGEF1-206ENST00000519436 PGM5Q15124 567 aa24.59■■□□□ 1.53
ARFGEF1-206ENST00000519436 RASIP1Q5U651 963 aa24.59■■□□□ 1.53
ARFGEF1-206ENST00000519436 SRBD1Q8N5C6 995 aaKnown RBP24.59■■□□□ 1.53
ARFGEF1-206ENST00000519436 IL31RAQ8NI17 732 aa24.59■■□□□ 1.53
ARFGEF1-206ENST00000519436 LRRC2Q9BYS8 371 aa24.59■■□□□ 1.53
ARFGEF1-206ENST00000519436 HIPK3Q9H422 1215 aa24.59■■□□□ 1.53
ARFGEF1-206ENST00000519436 TRMT13Q9NUP7 481 aaKnown RBP24.59■■□□□ 1.53
ARFGEF1-206ENST00000519436 CDC45O75419 566 aa24.58■■□□□ 1.53
ARFGEF1-206ENST00000519436 PLEKHA8P1O95397 391 aa24.58■■□□□ 1.53
ARFGEF1-206ENST00000519436 EXOSC10Q01780 885 aaKnown RBP24.58■■□□□ 1.53
ARFGEF1-206ENST00000519436 NFXL1Q6ZNB6 911 aa24.58■■□□□ 1.53
ARFGEF1-206ENST00000519436 SGMS1Q86VZ5 419 aa24.58■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms