RNA–Protein interactions for RNA: ENST00000518723.1

TRAPPC9-204, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-204ENST00000518723 CLEC4DQ8WXI8 215 aa14.59□□□□□ -0.07
TRAPPC9-204ENST00000518723 SEC62Q99442 399 aaKnown RBP14.59□□□□□ -0.07
TRAPPC9-204ENST00000518723 MPHOSPH6Q99547 160 aaKnown RBP14.59□□□□□ -0.07
TRAPPC9-204ENST00000518723 CD320Q9NPF0 282 aa14.59□□□□□ -0.07
TRAPPC9-204ENST00000518723 PNMA2Q9UL42 364 aa14.59□□□□□ -0.07
TRAPPC9-204ENST00000518723 NOD1Q9Y239 953 aa14.59□□□□□ -0.07
TRAPPC9-204ENST00000518723 PTPDC1A2A3K4 754 aa14.58□□□□□ -0.08
TRAPPC9-204ENST00000518723 LCHNA4D1U4 455 aa14.58□□□□□ -0.08
TRAPPC9-204ENST00000518723 PARNO95453 639 aaKnown RBP14.58□□□□□ -0.08
TRAPPC9-204ENST00000518723 PDE4DQ08499 809 aa14.58□□□□□ -0.08
TRAPPC9-204ENST00000518723 RBL2Q08999 1139 aa14.58□□□□□ -0.08
TRAPPC9-204ENST00000518723 GPNMBQ14956 572 aa14.58□□□□□ -0.08
TRAPPC9-204ENST00000518723 CCDC96Q2M329 555 aa14.58□□□□□ -0.08
TRAPPC9-204ENST00000518723 SYDE2Q5VT97 1194 aa14.58□□□□□ -0.08
TRAPPC9-204ENST00000518723 SLC30A10Q6XR72 485 aa14.58□□□□□ -0.08
TRAPPC9-204ENST00000518723 SESTD1Q86VW0 696 aa14.58□□□□□ -0.08
TRAPPC9-204ENST00000518723 DNERQ8NFT8 737 aa14.58□□□□□ -0.08
TRAPPC9-204ENST00000518723 GDPD5Q8WTR4 605 aa14.58□□□□□ -0.08
TRAPPC9-204ENST00000518723 CTAGE1Q96RT6 745 aa14.58□□□□□ -0.08
TRAPPC9-204ENST00000518723 TET1Q8NFU7 2136 aa14.57□□□□□ -0.08
TRAPPC9-204ENST00000518723 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.57□□□□□ -0.08
TRAPPC9-204ENST00000518723 FAM86C2PA6NEL3 165 aa14.57□□□□□ -0.08
TRAPPC9-204ENST00000518723 FOXP2O15409 715 aa14.57□□□□□ -0.08
TRAPPC9-204ENST00000518723 CXCL10P02778 98 aa14.57□□□□□ -0.08
TRAPPC9-204ENST00000518723 CALML3P27482 149 aa14.57□□□□□ -0.08
TRAPPC9-204ENST00000518723 SLC16A2P36021 539 aa14.57□□□□□ -0.08
TRAPPC9-204ENST00000518723 PTGISQ16647 500 aa14.57□□□□□ -0.08
TRAPPC9-204ENST00000518723 ZMYM1Q5SVZ6 1142 aa14.57□□□□□ -0.08
TRAPPC9-204ENST00000518723 TTBK2Q6IQ55 1244 aa14.57□□□□□ -0.08
TRAPPC9-204ENST00000518723 CNKSR3Q6P9H4 555 aa14.57□□□□□ -0.08
TRAPPC9-204ENST00000518723 RNF207Q6ZRF8 634 aa14.57□□□□□ -0.08
TRAPPC9-204ENST00000518723 PPP1R13LQ8WUF5 828 aa14.57□□□□□ -0.08
TRAPPC9-204ENST00000518723 COPS5Q92905 334 aa14.57□□□□□ -0.08
TRAPPC9-204ENST00000518723 UBE2ZQ9H832 354 aaPredicted RBP14.57□□□□□ -0.08
TRAPPC9-204ENST00000518723 ANAPC4Q9UJX5 808 aa14.57□□□□□ -0.08
TRAPPC9-204ENST00000518723 COL4A4P53420 1690 aaPredicted RBP14.56□□□□□ -0.08
TRAPPC9-204ENST00000518723 PRR33A8MZF0 331 aa14.56□□□□□ -0.08
TRAPPC9-204ENST00000518723 ORC4O43929 436 aa14.56□□□□□ -0.08
TRAPPC9-204ENST00000518723 GJB5O95377 273 aa14.56□□□□□ -0.08
TRAPPC9-204ENST00000518723 TXNP10599 105 aaKnown RBP14.56□□□□□ -0.08
TRAPPC9-204ENST00000518723 SELPP16109 830 aa14.56□□□□□ -0.08
TRAPPC9-204ENST00000518723 ERVK-21P61565 698 aa14.56□□□□□ -0.08
TRAPPC9-204ENST00000518723 RPS6P62753 249 aaKnown RBP14.56□□□□□ -0.08
TRAPPC9-204ENST00000518723 DEFB103AP81534 67 aa14.56□□□□□ -0.08
TRAPPC9-204ENST00000518723 LEXMQ3ZCV2 418 aa14.56□□□□□ -0.08
TRAPPC9-204ENST00000518723 TGS1Q96RS0 853 aaKnown RBP14.56□□□□□ -0.08
TRAPPC9-204ENST00000518723 RAD9AQ99638 391 aa14.56□□□□□ -0.08
TRAPPC9-204ENST00000518723 ZBED2Q9BTP6 218 aa14.56□□□□□ -0.08
TRAPPC9-204ENST00000518723 DCTPP1Q9H773 170 aa14.56□□□□□ -0.08
TRAPPC9-204ENST00000518723 SUGCTQ9HAC7 445 aa14.56□□□□□ -0.08
TRAPPC9-204ENST00000518723 INCENPQ9NQS7 918 aa14.56□□□□□ -0.08
TRAPPC9-204ENST00000518723 MTMR7Q9Y216 660 aa14.56□□□□□ -0.08
TRAPPC9-204ENST00000518723 TTC41PQ6P2S7 1318 aa14.56□□□□□ -0.08
TRAPPC9-204ENST00000518723 WDR19Q8NEZ3 1342 aa14.56□□□□□ -0.08
TRAPPC9-204ENST00000518723 ABHD14A-ACY1A0A1B0GW23 586 aa14.55□□□□□ -0.08
TRAPPC9-204ENST00000518723 B4DLN1 442 aa14.55□□□□□ -0.08
TRAPPC9-204ENST00000518723 RANBP6O60518 1105 aaKnown RBP14.55□□□□□ -0.08
TRAPPC9-204ENST00000518723 ARIH2O95376 493 aa14.55□□□□□ -0.08
TRAPPC9-204ENST00000518723 FGRP09769 529 aa14.55□□□□□ -0.08
TRAPPC9-204ENST00000518723 MRPL12P52815 198 aaKnown RBP14.55□□□□□ -0.08
TRAPPC9-204ENST00000518723 CTDSPL2Q05D32 466 aa14.55□□□□□ -0.08
TRAPPC9-204ENST00000518723 GDF6Q6KF10 455 aaPredicted RBP14.55□□□□□ -0.08
TRAPPC9-204ENST00000518723 CCDC62Q6P9F0 684 aa14.55□□□□□ -0.08
TRAPPC9-204ENST00000518723 LRRC8DQ7L1W4 858 aa14.55□□□□□ -0.08
TRAPPC9-204ENST00000518723 FAM178BQ8IXR5 827 aa14.55□□□□□ -0.08
TRAPPC9-204ENST00000518723 DHX38Q92620 1227 aaKnown RBP14.55□□□□□ -0.08
TRAPPC9-204ENST00000518723 LINC01553A4QN01 128 aa14.54□□□□□ -0.08
TRAPPC9-204ENST00000518723 NBNO60934 754 aa14.54□□□□□ -0.08
TRAPPC9-204ENST00000518723 EFCAB14O75071 495 aa14.54□□□□□ -0.08
TRAPPC9-204ENST00000518723 TOP1P11387 765 aaKnown RBP14.54□□□□□ -0.08
TRAPPC9-204ENST00000518723 TMCO2Q7Z6W1 182 aaPredicted RBP14.54□□□□□ -0.08
TRAPPC9-204ENST00000518723 GJD3Q8N144 294 aa14.54□□□□□ -0.08
TRAPPC9-204ENST00000518723 RGS22Q8NE09 1264 aa14.54□□□□□ -0.08
TRAPPC9-204ENST00000518723 PI4K2BQ8TCG2 481 aa14.54□□□□□ -0.08
TRAPPC9-204ENST00000518723 KAT2BQ92831 832 aa14.54□□□□□ -0.08
TRAPPC9-204ENST00000518723 TMEM47Q9BQJ4 181 aa14.54□□□□□ -0.08
TRAPPC9-204ENST00000518723 FSD1Q9BTV5 496 aa14.54□□□□□ -0.08
TRAPPC9-204ENST00000518723 MAF1Q9H063 256 aa14.54□□□□□ -0.08
TRAPPC9-204ENST00000518723 PTPRSQ13332 1948 aa14.53□□□□□ -0.08
TRAPPC9-204ENST00000518723 FRMPD2Q68DX3 1309 aaPredicted RBP14.53□□□□□ -0.08
TRAPPC9-204ENST00000518723 MMP3P08254 477 aa14.53□□□□□ -0.08
TRAPPC9-204ENST00000518723 PDHBP11177 359 aa14.53□□□□□ -0.08
TRAPPC9-204ENST00000518723 CKBP12277 381 aa14.53□□□□□ -0.08
TRAPPC9-204ENST00000518723 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.53□□□□□ -0.08
TRAPPC9-204ENST00000518723 AFG1LQ8WV93 481 aa14.53□□□□□ -0.08
TRAPPC9-204ENST00000518723 GPCPD1Q9NPB8 672 aa14.53□□□□□ -0.08
TRAPPC9-204ENST00000518723 TCP11L1Q9NUJ3 509 aa14.53□□□□□ -0.08
TRAPPC9-204ENST00000518723 GTF2IRD1Q9UHL9 959 aa14.53□□□□□ -0.08
TRAPPC9-204ENST00000518723 MTUS1Q9ULD2 1270 aa14.53□□□□□ -0.08
TRAPPC9-204ENST00000518723 GH1P01241 217 aa14.52□□□□□ -0.09
TRAPPC9-204ENST00000518723 ALADP13716 330 aa14.52□□□□□ -0.09
TRAPPC9-204ENST00000518723 KCNA5P22460 613 aa14.52□□□□□ -0.09
TRAPPC9-204ENST00000518723 CHMP4BP1P59074 171 aa14.52□□□□□ -0.09
TRAPPC9-204ENST00000518723 ARHGAP1Q07960 439 aa14.52□□□□□ -0.09
TRAPPC9-204ENST00000518723 ALX1Q15699 326 aa14.52□□□□□ -0.09
TRAPPC9-204ENST00000518723 TCTN1Q2MV58 587 aa14.52□□□□□ -0.09
TRAPPC9-204ENST00000518723 PUS10Q3MIT2 529 aaKnown RBP14.52□□□□□ -0.09
TRAPPC9-204ENST00000518723 ALYREFQ86V81 257 aaKnown RBP14.52□□□□□ -0.09
TRAPPC9-204ENST00000518723 SNHG28P0DPA3 235 aa14.51□□□□□ -0.09
TRAPPC9-204ENST00000518723 CASTP20810 708 aaKnown RBP14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms