RNA–Protein interactions for RNA: ENST00000518587.1

NPM1-205, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 670 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-205ENST00000518587 NEFLP07196 543 aa7.72□□□□□ -1.17
NPM1-205ENST00000518587 NBPF7P0C2Y1 421 aaPredicted RBP7.72□□□□□ -1.17
NPM1-205ENST00000518587 FGFR2P21802 821 aa7.72□□□□□ -1.17
NPM1-205ENST00000518587 COL8A1P27658 744 aa7.72□□□□□ -1.17
NPM1-205ENST00000518587 IL15P40933 162 aaPredicted RBP7.72□□□□□ -1.17
NPM1-205ENST00000518587 VGLL4Q14135 290 aa7.72□□□□□ -1.17
NPM1-205ENST00000518587 CCL15Q16663 113 aa7.72□□□□□ -1.17
NPM1-205ENST00000518587 FAM151AQ8WW52 585 aa7.72□□□□□ -1.17
NPM1-205ENST00000518587 ARHGAP45Q92619 1136 aa7.72□□□□□ -1.17
NPM1-205ENST00000518587 PBX4Q9BYU1 374 aa7.72□□□□□ -1.17
NPM1-205ENST00000518587 AKAP2Q9Y2D5 859 aa7.72□□□□□ -1.17
NPM1-205ENST00000518587 TCP10L2B9ZVM9 353 aa7.71□□□□□ -1.18
NPM1-205ENST00000518587 EIF1AYO14602 144 aaKnown RBP7.71□□□□□ -1.18
NPM1-205ENST00000518587 IPO8O15397 1037 aaKnown RBP7.71□□□□□ -1.18
NPM1-205ENST00000518587 LDHBP07195 334 aaKnown RBP7.71□□□□□ -1.18
NPM1-205ENST00000518587 GNAI3P08754 354 aa7.71□□□□□ -1.18
NPM1-205ENST00000518587 CHAF1AQ13111 956 aaPredicted RBP7.71□□□□□ -1.18
NPM1-205ENST00000518587 DSC3Q14574 896 aa7.71□□□□□ -1.18
NPM1-205ENST00000518587 SLC9C1Q4G0N8 1177 aa7.71□□□□□ -1.18
NPM1-205ENST00000518587 NOL9Q5SY16 702 aaKnown RBP7.71□□□□□ -1.18
NPM1-205ENST00000518587 TMED8Q6PL24 325 aaPredicted RBP7.71□□□□□ -1.18
NPM1-205ENST00000518587 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.71□□□□□ -1.18
NPM1-205ENST00000518587 ANKRD44Q8N8A2 993 aa7.71□□□□□ -1.18
NPM1-205ENST00000518587 KAZALD1Q96I82 304 aa7.71□□□□□ -1.18
NPM1-205ENST00000518587 CLMNQ96JQ2 1002 aa7.71□□□□□ -1.18
NPM1-205ENST00000518587 ASB16Q96NS5 453 aa7.71□□□□□ -1.18
NPM1-205ENST00000518587 WRNIP1Q96S55 665 aa7.71□□□□□ -1.18
NPM1-205ENST00000518587 PARK7Q99497 189 aaKnown RBP7.71□□□□□ -1.18
NPM1-205ENST00000518587 USP44Q9H0E7 712 aa7.71□□□□□ -1.18
NPM1-205ENST00000518587 SMC4Q9NTJ3 1288 aa7.71□□□□□ -1.18
NPM1-205ENST00000518587 DZANK1Q9NVP4 752 aa7.71□□□□□ -1.18
NPM1-205ENST00000518587 TRIM33Q9UPN9 1127 aa7.71□□□□□ -1.18
NPM1-205ENST00000518587 SLC45A1Q9Y2W3 748 aa7.71□□□□□ -1.18
NPM1-205ENST00000518587 MYH13Q9UKX3 1938 aa7.71□□□□□ -1.18
NPM1-205ENST00000518587 OTOFQ9HC10 1997 aa7.7□□□□□ -1.18
NPM1-205ENST00000518587 CXCL11O14625 94 aa7.7□□□□□ -1.18
NPM1-205ENST00000518587 TREHO43280 583 aa7.7□□□□□ -1.18
NPM1-205ENST00000518587 CPNE3O75131 537 aaKnown RBP7.7□□□□□ -1.18
NPM1-205ENST00000518587 ENTPD3O75355 529 aa7.7□□□□□ -1.18
NPM1-205ENST00000518587 EDN3P14138 238 aa7.7□□□□□ -1.18
NPM1-205ENST00000518587 GSTO1P78417 241 aa7.7□□□□□ -1.18
NPM1-205ENST00000518587 PLCB3Q01970 1234 aa7.7□□□□□ -1.18
NPM1-205ENST00000518587 SLFN5Q08AF3 891 aa7.7□□□□□ -1.18
NPM1-205ENST00000518587 MVPQ14764 893 aaKnown RBP7.7□□□□□ -1.18
NPM1-205ENST00000518587 PEAR1Q5VY43 1037 aaPredicted RBP7.7□□□□□ -1.18
NPM1-205ENST00000518587 CEP135Q66GS9 1140 aa7.7□□□□□ -1.18
NPM1-205ENST00000518587 GDF6Q6KF10 455 aaPredicted RBP7.7□□□□□ -1.18
NPM1-205ENST00000518587 ADAMTSL4Q6UY14 1074 aa7.7□□□□□ -1.18
NPM1-205ENST00000518587 FASTKD5Q7L8L6 764 aaKnown RBP7.7□□□□□ -1.18
NPM1-205ENST00000518587 ANKRD23Q86SG2 305 aa7.7□□□□□ -1.18
NPM1-205ENST00000518587 ZSCAN29Q8IWY8 852 aaPredicted RBP7.7□□□□□ -1.18
NPM1-205ENST00000518587 DMRTC2Q8IXT2 367 aaPredicted RBP7.7□□□□□ -1.18
NPM1-205ENST00000518587 POP1Q99575 1024 aaKnown RBP7.7□□□□□ -1.18
NPM1-205ENST00000518587 TMEM39BQ9GZU3 492 aa7.7□□□□□ -1.18
NPM1-205ENST00000518587 LATS2Q9NRM7 1088 aa7.7□□□□□ -1.18
NPM1-205ENST00000518587 SCAF8Q9UPN6 1271 aaKnown RBP7.7□□□□□ -1.18
NPM1-205ENST00000518587 SNAP23O00161 211 aa7.69□□□□□ -1.18
NPM1-205ENST00000518587 SMNDC1O75940 238 aaKnown RBP eCLIP7.69□□□□□ -1.181e-8■■□□□ 14.3
NPM1-205ENST00000518587 LDHCP07864 332 aa7.69□□□□□ -1.18
NPM1-205ENST00000518587 LACTBP83111 547 aaPredicted RBP7.69□□□□□ -1.18
NPM1-205ENST00000518587 ATP2B3Q16720 1220 aa7.69□□□□□ -1.18
NPM1-205ENST00000518587 LRRC24Q50LG9 513 aa7.69□□□□□ -1.18
NPM1-205ENST00000518587 APOBEC3HQ6NTF7 200 aaKnown RBP7.69□□□□□ -1.18
NPM1-205ENST00000518587 CERS3Q8IU89 383 aa7.69□□□□□ -1.18
NPM1-205ENST00000518587 GALNT12Q8IXK2 581 aa7.69□□□□□ -1.18
NPM1-205ENST00000518587 CD99L2Q8TCZ2 262 aa7.69□□□□□ -1.18
NPM1-205ENST00000518587 BRI3BPQ8WY22 251 aa7.69□□□□□ -1.18
NPM1-205ENST00000518587 SSH1Q8WYL5 1049 aa7.69□□□□□ -1.18
NPM1-205ENST00000518587 ZNF333Q96JL9 665 aa7.69□□□□□ -1.18
NPM1-205ENST00000518587 HHIPQ96QV1 700 aa7.69□□□□□ -1.18
NPM1-205ENST00000518587 OSMRQ99650 979 aa7.69□□□□□ -1.18
NPM1-205ENST00000518587 PTPN18Q99952 460 aa7.69□□□□□ -1.18
NPM1-205ENST00000518587 ZKSCAN3Q9BRR0 538 aa7.69□□□□□ -1.18
NPM1-205ENST00000518587 IDI2Q9BXS1 227 aa7.69□□□□□ -1.18
NPM1-205ENST00000518587 PUS3Q9BZE2 481 aaKnown RBP7.69□□□□□ -1.18
NPM1-205ENST00000518587 DNAJC25Q9H1X3 360 aa7.69□□□□□ -1.18
NPM1-205ENST00000518587 COPRSQ9NQ92 184 aa7.69□□□□□ -1.18
NPM1-205ENST00000518587 PICK1Q9NRD5 415 aa7.69□□□□□ -1.18
NPM1-205ENST00000518587 NOP53Q9NZM5 478 aaKnown RBP7.69□□□□□ -1.18
NPM1-205ENST00000518587 ZNF112Q9UJU3 913 aa7.69□□□□□ -1.18
NPM1-205ENST00000518587 SNCAIPQ9Y6H5 919 aa7.69□□□□□ -1.18
NPM1-205ENST00000518587 CCER2I3L3R5 266 aa7.68□□□□□ -1.18
NPM1-205ENST00000518587 RFX5P48382 616 aaPredicted RBP7.68□□□□□ -1.18
NPM1-205ENST00000518587 UBXN2AP68543 259 aa7.68□□□□□ -1.18
NPM1-205ENST00000518587 PABPC4Q13310 644 aaKnown RBP eCLIP7.68□□□□□ -1.18
NPM1-205ENST00000518587 MTX1Q13505 466 aa7.68□□□□□ -1.18
NPM1-205ENST00000518587 SLC4A8Q2Y0W8 1093 aa7.68□□□□□ -1.18
NPM1-205ENST00000518587 DZIP1Q86YF9 867 aaKnown RBP7.68□□□□□ -1.18
NPM1-205ENST00000518587 WFDC8Q8IUA0 241 aa7.68□□□□□ -1.18
NPM1-205ENST00000518587 GINM1Q9NU53 330 aa7.68□□□□□ -1.18
NPM1-205ENST00000518587 JAG2Q9Y219 1238 aa7.68□□□□□ -1.18
NPM1-205ENST00000518587 DAGLAQ9Y4D2 1042 aa7.68□□□□□ -1.18
NPM1-205ENST00000518587 COL2A1P02458 1487 aaPredicted RBP7.68□□□□□ -1.18
NPM1-205ENST00000518587 KIAA0100Q14667 2235 aaKnown RBP7.67□□□□□ -1.18
NPM1-205ENST00000518587 SPDYE3A6NKU9 549 aa7.67□□□□□ -1.18
NPM1-205ENST00000518587 CTNND1O60716 968 aaKnown RBP7.67□□□□□ -1.18
NPM1-205ENST00000518587 FCGRTP55899 365 aa7.67□□□□□ -1.18
NPM1-205ENST00000518587 TRMT2AQ8IZ69 625 aaKnown RBP7.67□□□□□ -1.18
NPM1-205ENST00000518587 SCYL3Q8IZE3 742 aa7.67□□□□□ -1.18
NPM1-205ENST00000518587 FAM43AQ8N2R8 423 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms