RNA–Protein interactions for RNA: ENST00000517488.1

PDGFRB-202, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 3

Gene PDGFRB, Length 822 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-202ENST00000517488 MPHOSPH6Q99547 160 aaKnown RBP16.33■□□□□ 0.2
PDGFRB-202ENST00000517488 LZTS2Q9BRK4 669 aa16.33■□□□□ 0.2
PDGFRB-202ENST00000517488 BRPF3Q9ULD4 1205 aa16.33■□□□□ 0.2
PDGFRB-202ENST00000517488 Q9Y3F1 56 aa16.33■□□□□ 0.2
PDGFRB-202ENST00000517488 SNX14Q9Y5W7 946 aa16.33■□□□□ 0.2
PDGFRB-202ENST00000517488 B4DLN1 442 aa16.32■□□□□ 0.2
PDGFRB-202ENST00000517488 REC8O95072 547 aa16.32■□□□□ 0.2
PDGFRB-202ENST00000517488 EIF2AK2P19525 551 aaKnown RBP16.32■□□□□ 0.2
PDGFRB-202ENST00000517488 MRPL12P52815 198 aaKnown RBP16.32■□□□□ 0.2
PDGFRB-202ENST00000517488 TRAF1Q13077 416 aa16.32■□□□□ 0.2
PDGFRB-202ENST00000517488 ARHGEF16Q5VV41 709 aa16.32■□□□□ 0.2
PDGFRB-202ENST00000517488 RRP36Q96EU6 259 aaKnown RBP16.32■□□□□ 0.2
PDGFRB-202ENST00000517488 GLT1D1Q96MS3 346 aa16.32■□□□□ 0.2
PDGFRB-202ENST00000517488 JAKMIP1Q96N16 626 aaKnown RBP16.32■□□□□ 0.2
PDGFRB-202ENST00000517488 PXMP2Q9NR77 195 aa16.32■□□□□ 0.2
PDGFRB-202ENST00000517488 BAZ2BQ9UIF8 2168 aaKnown RBP16.32■□□□□ 0.2
PDGFRB-202ENST00000517488 ELP1O95163 1332 aa16.31■□□□□ 0.2
PDGFRB-202ENST00000517488 hCG_1642624A0A1W2PR95 340 aa16.31■□□□□ 0.2
PDGFRB-202ENST00000517488 GCOM1H8Y6P7 765 aaPredicted RBP16.31■□□□□ 0.2
PDGFRB-202ENST00000517488 PQBP1O60828 265 aaKnown RBP16.31■□□□□ 0.2
PDGFRB-202ENST00000517488 HMGB1P09429 215 aaKnown RBP16.31■□□□□ 0.2
PDGFRB-202ENST00000517488 POLR2MP0CAP2 368 aa16.31■□□□□ 0.2
PDGFRB-202ENST00000517488 MDM2Q00987 491 aaPredicted RBP16.31■□□□□ 0.2
PDGFRB-202ENST00000517488 APOA5Q6Q788 366 aa16.31■□□□□ 0.2
PDGFRB-202ENST00000517488 CXCL17Q6UXB2 119 aa16.31■□□□□ 0.2
PDGFRB-202ENST00000517488 SYNE3Q6ZMZ3 975 aa16.31■□□□□ 0.2
PDGFRB-202ENST00000517488 TMTC3Q6ZXV5 915 aa16.31■□□□□ 0.2
PDGFRB-202ENST00000517488 SH3RF1Q7Z6J0 888 aa16.31■□□□□ 0.2
PDGFRB-202ENST00000517488 CCDC82Q8N4S0 544 aa16.31■□□□□ 0.2
PDGFRB-202ENST00000517488 SCFD2Q8WU76 684 aa16.31■□□□□ 0.2
PDGFRB-202ENST00000517488 COPS5Q92905 334 aa16.31■□□□□ 0.2
PDGFRB-202ENST00000517488 VTI1AQ96AJ9 217 aa16.31■□□□□ 0.2
PDGFRB-202ENST00000517488 IWS1Q96ST2 819 aa16.31■□□□□ 0.2
PDGFRB-202ENST00000517488 PRDM5Q9NQX1 630 aaPredicted RBP16.31■□□□□ 0.2
PDGFRB-202ENST00000517488 PDLIM7Q9NR12 457 aa16.31■□□□□ 0.2
PDGFRB-202ENST00000517488 LAMA3Q16787 3333 aa16.31■□□□□ 0.2
PDGFRB-202ENST00000517488 TRIM43BA6NCK2 446 aa16.3■□□□□ 0.2
PDGFRB-202ENST00000517488 ARIH2O95376 493 aa16.3■□□□□ 0.2
PDGFRB-202ENST00000517488 NR3C2P08235 984 aa16.3■□□□□ 0.2
PDGFRB-202ENST00000517488 BMP8BP34820 402 aa16.3■□□□□ 0.2
PDGFRB-202ENST00000517488 PPP2R5BQ15173 497 aa16.3■□□□□ 0.2
PDGFRB-202ENST00000517488 STXBP2Q15833 593 aa16.3■□□□□ 0.2
PDGFRB-202ENST00000517488 SEPT14Q6ZU15 432 aa16.3■□□□□ 0.2
PDGFRB-202ENST00000517488 FCHSD1Q86WN1 690 aa16.3■□□□□ 0.2
PDGFRB-202ENST00000517488 OR6J1Q8NGC5 347 aa16.3■□□□□ 0.2
PDGFRB-202ENST00000517488 TRIM43Q96BQ3 446 aaPredicted RBP16.3■□□□□ 0.2
PDGFRB-202ENST00000517488 MAP3K20Q9NYL2 800 aaKnown RBP16.3■□□□□ 0.2
PDGFRB-202ENST00000517488 PRKAG2Q9UGJ0 569 aa16.3■□□□□ 0.2
PDGFRB-202ENST00000517488 SEC63Q9UGP8 760 aaKnown RBP16.3■□□□□ 0.2
PDGFRB-202ENST00000517488 LRRC37A2A6NM11 1700 aa16.29■□□□□ 0.2
PDGFRB-202ENST00000517488 KLF18A0A0U1RQI7 1052 aa16.29■□□□□ 0.2
PDGFRB-202ENST00000517488 ZBTB43O43298 467 aa16.29■□□□□ 0.2
PDGFRB-202ENST00000517488 TXNP10599 105 aaKnown RBP16.29■□□□□ 0.2
PDGFRB-202ENST00000517488 CDK7P50613 346 aa16.29■□□□□ 0.2
PDGFRB-202ENST00000517488 FXR1P51114 621 aaKnown RBP eCLIP16.29■□□□□ 0.2
PDGFRB-202ENST00000517488 CCDC62Q6P9F0 684 aa16.29■□□□□ 0.2
PDGFRB-202ENST00000517488 ANKRD33Q7Z3H0 272 aa16.29■□□□□ 0.2
PDGFRB-202ENST00000517488 SAMD3Q8N6K7 520 aa16.29■□□□□ 0.2
PDGFRB-202ENST00000517488 IL31RAQ8NI17 732 aa16.29■□□□□ 0.2
PDGFRB-202ENST00000517488 PDCD2LQ9BRP1 358 aa16.29■□□□□ 0.2
PDGFRB-202ENST00000517488 GRIN2DO15399 1336 aa16.28■□□□□ 0.2
PDGFRB-202ENST00000517488 A0A0U1RQG5 324 aaPredicted RBP16.28■□□□□ 0.2
PDGFRB-202ENST00000517488 ARVCFO00192 962 aa16.28■□□□□ 0.2
PDGFRB-202ENST00000517488 NKRFO15226 690 aaKnown RBP eCLIP16.28■□□□□ 0.2
PDGFRB-202ENST00000517488 ZEB2O60315 1214 aa16.28■□□□□ 0.2
PDGFRB-202ENST00000517488 EIF3JO75822 258 aaKnown RBP16.28■□□□□ 0.2
PDGFRB-202ENST00000517488 CLTBP09497 229 aa16.28■□□□□ 0.2
PDGFRB-202ENST00000517488 MYCLP12524 364 aaPredicted RBP16.28■□□□□ 0.2
PDGFRB-202ENST00000517488 FAAP100Q0VG06 881 aa16.28■□□□□ 0.2
PDGFRB-202ENST00000517488 TTLL4Q14679 1199 aa16.28■□□□□ 0.2
PDGFRB-202ENST00000517488 RTN1Q16799 776 aa16.28■□□□□ 0.2
PDGFRB-202ENST00000517488 BLOC1S2Q6QNY1 142 aa16.28■□□□□ 0.2
PDGFRB-202ENST00000517488 Q6ZUG5 572 aa16.28■□□□□ 0.2
PDGFRB-202ENST00000517488 TOX2Q96NM4 488 aa16.28■□□□□ 0.2
PDGFRB-202ENST00000517488 LBHD1Q9BQE6 289 aaPredicted RBP16.28■□□□□ 0.2
PDGFRB-202ENST00000517488 USP26Q9BXU7 913 aa16.28■□□□□ 0.2
PDGFRB-202ENST00000517488 UBE2OQ9C0C9 1292 aaKnown RBP16.28■□□□□ 0.2
PDGFRB-202ENST00000517488 FAM217BQ9NTX9 383 aaPredicted RBP16.28■□□□□ 0.2
PDGFRB-202ENST00000517488 CABYRO75952 493 aa16.27■□□□□ 0.2
PDGFRB-202ENST00000517488 RGS20O76081 388 aa16.27■□□□□ 0.2
PDGFRB-202ENST00000517488 RPS6KB1P23443 525 aa16.27■□□□□ 0.2
PDGFRB-202ENST00000517488 ITGB8P26012 769 aa16.27■□□□□ 0.2
PDGFRB-202ENST00000517488 FGD1P98174 961 aa16.27■□□□□ 0.2
PDGFRB-202ENST00000517488 APOBRQ0VD83 1088 aa16.27■□□□□ 0.2
PDGFRB-202ENST00000517488 FUT2Q10981 343 aa16.27■□□□□ 0.2
PDGFRB-202ENST00000517488 PGM5Q15124 567 aa16.27■□□□□ 0.2
PDGFRB-202ENST00000517488 LY6KQ17RY6 165 aa16.27■□□□□ 0.2
PDGFRB-202ENST00000517488 USP17L6PQ6QN14 398 aa16.27■□□□□ 0.2
PDGFRB-202ENST00000517488 SLC43A3Q8NBI5 491 aa16.27■□□□□ 0.2
PDGFRB-202ENST00000517488 ZFP91Q96JP5 570 aaPredicted RBP16.27■□□□□ 0.2
PDGFRB-202ENST00000517488 RBM28Q9NW13 759 aaKnown RBP16.27■□□□□ 0.2
PDGFRB-202ENST00000517488 NAP1L2Q9ULW6 460 aaPredicted RBP16.27■□□□□ 0.2
PDGFRB-202ENST00000517488 A0A1W2PPC1 479 aa16.26■□□□□ 0.19
PDGFRB-202ENST00000517488 GOLGA8AA7E2F4 631 aa16.26■□□□□ 0.19
PDGFRB-202ENST00000517488 GOLGA8BA8MQT2 603 aa16.26■□□□□ 0.19
PDGFRB-202ENST00000517488 DCDC2CA8MYV0 355 aa16.26■□□□□ 0.19
PDGFRB-202ENST00000517488 KIAA0355O15063 1070 aa16.26■□□□□ 0.19
PDGFRB-202ENST00000517488 EPB41L2O43491 1005 aaKnown RBP16.26■□□□□ 0.19
PDGFRB-202ENST00000517488 MYL3P08590 195 aa16.26■□□□□ 0.19
PDGFRB-202ENST00000517488 CASTP20810 708 aaKnown RBP16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms