RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 TMEM238LA0A1B0GVL6 79 aa0.55□□□□□ -2.32
RNU6-542P-201ENST00000516405 TP73O15350 636 aa0.55□□□□□ -2.32
RNU6-542P-201ENST00000516405 TRIM37O94972 964 aa0.55□□□□□ -2.32
RNU6-542P-201ENST00000516405 MATN4O95460 622 aa0.55□□□□□ -2.32
RNU6-542P-201ENST00000516405 BMP6P22004 513 aa0.55□□□□□ -2.32
RNU6-542P-201ENST00000516405 TACR1P25103 407 aa0.55□□□□□ -2.32
RNU6-542P-201ENST00000516405 CDK8P49336 464 aa0.55□□□□□ -2.32
RNU6-542P-201ENST00000516405 NHLH1Q02575 133 aa0.55□□□□□ -2.32
RNU6-542P-201ENST00000516405 PTPN11Q06124 597 aaPredicted RBP0.55□□□□□ -2.32
RNU6-542P-201ENST00000516405 PPP2R3AQ06190 1150 aa0.55□□□□□ -2.32
RNU6-542P-201ENST00000516405 DUSP8Q13202 625 aa0.55□□□□□ -2.32
RNU6-542P-201ENST00000516405 RASIP1Q5U651 963 aa0.55□□□□□ -2.32
RNU6-542P-201ENST00000516405 TECPR1Q7Z6L1 1165 aa0.55□□□□□ -2.32
RNU6-542P-201ENST00000516405 MRPL41Q8IXM3 137 aaKnown RBP0.55□□□□□ -2.32
RNU6-542P-201ENST00000516405 DAGLBQ8NCG7 672 aa0.55□□□□□ -2.32
RNU6-542P-201ENST00000516405 PDPRQ8NCN5 879 aa0.55□□□□□ -2.32
RNU6-542P-201ENST00000516405 ENOX1Q8TC92 643 aaKnown RBP0.55□□□□□ -2.32
RNU6-542P-201ENST00000516405 RNF141Q8WVD5 230 aa0.55□□□□□ -2.32
RNU6-542P-201ENST00000516405 NELL1Q92832 810 aa0.55□□□□□ -2.32
RNU6-542P-201ENST00000516405 NEIL1Q96FI4 390 aaPredicted RBP0.55□□□□□ -2.32
RNU6-542P-201ENST00000516405 PLPPR2Q96GM1 343 aa0.55□□□□□ -2.32
RNU6-542P-201ENST00000516405 FCRL4Q96PJ5 515 aa0.55□□□□□ -2.32
RNU6-542P-201ENST00000516405 CBX8Q9HC52 389 aa0.55□□□□□ -2.32
RNU6-542P-201ENST00000516405 PRM3Q9NNZ6 103 aa0.55□□□□□ -2.32
RNU6-542P-201ENST00000516405 TXLNGQ9NUQ3 528 aa0.55□□□□□ -2.32
RNU6-542P-201ENST00000516405 GPN3Q9UHW5 284 aaPredicted RBP0.55□□□□□ -2.32
RNU6-542P-201ENST00000516405 ZNF777Q9ULD5 760 aaPredicted RBP0.55□□□□□ -2.32
RNU6-542P-201ENST00000516405 A0A1W2PQ27 194 aa0.54□□□□□ -2.32
RNU6-542P-201ENST00000516405 A0A1W2PQ64 194 aa0.54□□□□□ -2.32
RNU6-542P-201ENST00000516405 A0A1W2PQC6 194 aa0.54□□□□□ -2.32
RNU6-542P-201ENST00000516405 A0A1W2PQD8 194 aa0.54□□□□□ -2.32
RNU6-542P-201ENST00000516405 SSU72P8A0A1W2PR75 194 aa0.54□□□□□ -2.32
RNU6-542P-201ENST00000516405 KRTAP23-1A1A580 65 aa0.54□□□□□ -2.32
RNU6-542P-201ENST00000516405 SPRY2O43597 315 aa0.54□□□□□ -2.32
RNU6-542P-201ENST00000516405 MZF1P28698 734 aaPredicted RBP0.54□□□□□ -2.32
RNU6-542P-201ENST00000516405 GRK4P32298 578 aa0.54□□□□□ -2.32
RNU6-542P-201ENST00000516405 ELLP55199 621 aaPredicted RBP0.54□□□□□ -2.32
RNU6-542P-201ENST00000516405 FOXL1Q12952 345 aa0.54□□□□□ -2.32
RNU6-542P-201ENST00000516405 NMIQ13287 307 aaPredicted RBP0.54□□□□□ -2.32
RNU6-542P-201ENST00000516405 VPS72Q15906 364 aa0.54□□□□□ -2.32
RNU6-542P-201ENST00000516405 OCLNQ16625 522 aa0.54□□□□□ -2.32
RNU6-542P-201ENST00000516405 C11orf87Q6NUJ2 197 aa0.54□□□□□ -2.32
RNU6-542P-201ENST00000516405 PRPF40BQ6NWY9 871 aaKnown RBP0.54□□□□□ -2.32
RNU6-542P-201ENST00000516405 PDZRN4Q6ZMN7 1036 aaPredicted RBP0.54□□□□□ -2.32
RNU6-542P-201ENST00000516405 ZDHHC17Q8IUH5 632 aa0.54□□□□□ -2.32
RNU6-542P-201ENST00000516405 ZNF513Q8N8E2 541 aaPredicted RBP0.54□□□□□ -2.32
RNU6-542P-201ENST00000516405 HAS1Q92839 578 aa0.54□□□□□ -2.32
RNU6-542P-201ENST00000516405 MKNK1Q9BUB5 465 aa0.54□□□□□ -2.32
RNU6-542P-201ENST00000516405 EMILIN2Q9BXX0 1053 aa0.54□□□□□ -2.32
RNU6-542P-201ENST00000516405 ANTXR1Q9H6X2 564 aa0.54□□□□□ -2.32
RNU6-542P-201ENST00000516405 PDLIM7Q9NR12 457 aa0.54□□□□□ -2.32
RNU6-542P-201ENST00000516405 CCDC9Q9Y3X0 531 aaKnown RBP0.54□□□□□ -2.32
RNU6-542P-201ENST00000516405 INSL6Q9Y581 213 aa0.54□□□□□ -2.32
RNU6-542P-201ENST00000516405 FCGBPQ9Y6R7 5405 aaPredicted RBP0.54□□□□□ -2.32
RNU6-542P-201ENST00000516405 IGKV2D-30A0A075B6S6 120 aa0.53□□□□□ -2.32
RNU6-542P-201ENST00000516405 USP17L15C9J2P7 530 aa0.53□□□□□ -2.32
RNU6-542P-201ENST00000516405 USP17L10C9JJH3 530 aa0.53□□□□□ -2.32
RNU6-542P-201ENST00000516405 USP17L13C9JLJ4 530 aa0.53□□□□□ -2.32
RNU6-542P-201ENST00000516405 USP17L12C9JPN9 530 aa0.53□□□□□ -2.32
RNU6-542P-201ENST00000516405 USP17L11C9JVI0 530 aa0.53□□□□□ -2.32
RNU6-542P-201ENST00000516405 USP17L21D6R901 530 aa0.53□□□□□ -2.32
RNU6-542P-201ENST00000516405 USP17L18D6R9N7 530 aa0.53□□□□□ -2.32
RNU6-542P-201ENST00000516405 USP17L22D6RA61 530 aa0.53□□□□□ -2.32
RNU6-542P-201ENST00000516405 USP17L17D6RBQ6 530 aa0.53□□□□□ -2.32
RNU6-542P-201ENST00000516405 USP17L19D6RCP7 530 aa0.53□□□□□ -2.32
RNU6-542P-201ENST00000516405 USP17L20D6RJB6 530 aa0.53□□□□□ -2.32
RNU6-542P-201ENST00000516405 PCSK2P16519 638 aa0.53□□□□□ -2.32
RNU6-542P-201ENST00000516405 TYRP1P17643 537 aa0.53□□□□□ -2.32
RNU6-542P-201ENST00000516405 HOXC13P31276 330 aa0.53□□□□□ -2.32
RNU6-542P-201ENST00000516405 PTGS2P35354 604 aa0.53□□□□□ -2.32
RNU6-542P-201ENST00000516405 SRSF4Q08170 494 aaKnown RBP0.53□□□□□ -2.32
RNU6-542P-201ENST00000516405 USP17L24Q0WX57 530 aa0.53□□□□□ -2.32
RNU6-542P-201ENST00000516405 RRP1BQ14684 758 aaKnown RBP0.53□□□□□ -2.32
RNU6-542P-201ENST00000516405 NBPF6Q5VWK0 638 aa0.53□□□□□ -2.32
RNU6-542P-201ENST00000516405 SPTY2D1Q68D10 685 aaPredicted RBP0.53□□□□□ -2.32
RNU6-542P-201ENST00000516405 KIAA1161Q6NSJ0 714 aa0.53□□□□□ -2.32
RNU6-542P-201ENST00000516405 CD300LDQ6UXZ3 194 aa0.53□□□□□ -2.32
RNU6-542P-201ENST00000516405 ZNF655Q8N720 491 aaPredicted RBP0.53□□□□□ -2.32
RNU6-542P-201ENST00000516405 TTC16Q8NEE8 873 aa0.53□□□□□ -2.32
RNU6-542P-201ENST00000516405 TMEM87BQ96K49 555 aa0.53□□□□□ -2.32
RNU6-542P-201ENST00000516405 NBPF4Q96M43 638 aa0.53□□□□□ -2.32
RNU6-542P-201ENST00000516405 OR14A2Q96R54 314 aa0.53□□□□□ -2.32
RNU6-542P-201ENST00000516405 BARX1Q9HBU1 254 aaPredicted RBP0.53□□□□□ -2.32
RNU6-542P-201ENST00000516405 PCDH18Q9HCL0 1135 aa0.53□□□□□ -2.32
RNU6-542P-201ENST00000516405 ALG13Q9NP73 1137 aaKnown RBP0.53□□□□□ -2.32
RNU6-542P-201ENST00000516405 ARHGAP20Q9P2F6 1191 aa0.53□□□□□ -2.32
RNU6-542P-201ENST00000516405 POLIQ9UNA4 740 aa0.53□□□□□ -2.32
RNU6-542P-201ENST00000516405 MINPP1Q9UNW1 487 aa0.53□□□□□ -2.32
RNU6-542P-201ENST00000516405 A0A1W2PQJ5 194 aa0.52□□□□□ -2.33
RNU6-542P-201ENST00000516405 ERI2A8K979 691 aaKnown RBP0.52□□□□□ -2.33
RNU6-542P-201ENST00000516405 INSIG1O15503 277 aa0.52□□□□□ -2.33
RNU6-542P-201ENST00000516405 B3GALT2O43825 422 aa0.52□□□□□ -2.33
RNU6-542P-201ENST00000516405 TROAPQ12815 778 aa0.52□□□□□ -2.33
RNU6-542P-201ENST00000516405 SLC9A5Q14940 896 aa0.52□□□□□ -2.33
RNU6-542P-201ENST00000516405 SLC6A19Q695T7 634 aa0.52□□□□□ -2.33
RNU6-542P-201ENST00000516405 AWAT2Q6E213 333 aa0.52□□□□□ -2.33
RNU6-542P-201ENST00000516405 TMC3Q7Z5M5 1100 aa0.52□□□□□ -2.33
RNU6-542P-201ENST00000516405 RALYLQ86SE5 291 aaKnown RBP0.52□□□□□ -2.33
RNU6-542P-201ENST00000516405 SIMC1Q8NDZ2 872 aa0.52□□□□□ -2.33
RNU6-542P-201ENST00000516405 ZSWIM3Q96MP5 696 aa0.52□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms