RNA–Protein interactions for RNA: ENST00000515597.1

LINC01088-211, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 1 (best)

Gene LINC01088, Length 664 nt, Biotype antisense RNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-211ENST00000515597 C7orf72A4D263 438 aa6.6□□□□□ -1.35
LINC01088-211ENST00000515597 K7ESM1 405 aa6.6□□□□□ -1.35
LINC01088-211ENST00000515597 NOBOXO60393 691 aa6.6□□□□□ -1.35
LINC01088-211ENST00000515597 FUCA1P04066 466 aa6.6□□□□□ -1.35
LINC01088-211ENST00000515597 CNR2P34972 360 aa6.6□□□□□ -1.35
LINC01088-211ENST00000515597 CACNB2Q08289 660 aaPredicted RBP6.6□□□□□ -1.35
LINC01088-211ENST00000515597 SMAD4Q13485 552 aaKnown RBP6.6□□□□□ -1.35
LINC01088-211ENST00000515597 KIAA1211LQ6NV74 962 aa6.6□□□□□ -1.35
LINC01088-211ENST00000515597 ZNF513Q8N8E2 541 aaPredicted RBP6.6□□□□□ -1.35
LINC01088-211ENST00000515597 OR6P1Q8NGX9 317 aa6.6□□□□□ -1.35
LINC01088-211ENST00000515597 ZBTB8AQ96BR9 441 aa6.6□□□□□ -1.35
LINC01088-211ENST00000515597 DDX11Q96FC9 970 aa6.6□□□□□ -1.35
LINC01088-211ENST00000515597 RCC1LQ96I51 464 aaKnown RBP6.6□□□□□ -1.35
LINC01088-211ENST00000515597 SHDQ96IW2 340 aa6.6□□□□□ -1.35
LINC01088-211ENST00000515597 SYT3Q9BQG1 590 aa6.6□□□□□ -1.35
LINC01088-211ENST00000515597 SPATA6Q9NWH7 488 aaPredicted RBP6.6□□□□□ -1.35
LINC01088-211ENST00000515597 NPHS1O60500 1241 aa6.59□□□□□ -1.35
LINC01088-211ENST00000515597 KCNH1O95259 989 aa6.59□□□□□ -1.35
LINC01088-211ENST00000515597 NTRK1P04629 796 aa6.59□□□□□ -1.35
LINC01088-211ENST00000515597 C8BP07358 591 aa6.59□□□□□ -1.35
LINC01088-211ENST00000515597 NASPP49321 788 aaPredicted RBP6.59□□□□□ -1.35
LINC01088-211ENST00000515597 GJA9P57773 515 aa6.59□□□□□ -1.35
LINC01088-211ENST00000515597 SLC9A5Q14940 896 aa6.59□□□□□ -1.35
LINC01088-211ENST00000515597 HHIPL2Q6UWX4 724 aa6.59□□□□□ -1.35
LINC01088-211ENST00000515597 FAM169BQ8N8A8 192 aa6.59□□□□□ -1.35
LINC01088-211ENST00000515597 CPA5Q8WXQ8 436 aa6.59□□□□□ -1.35
LINC01088-211ENST00000515597 NTMQ9P121 344 aa6.59□□□□□ -1.35
LINC01088-211ENST00000515597 AKT3Q9Y243 479 aa6.59□□□□□ -1.35
LINC01088-211ENST00000515597 PLS3P13797 630 aa6.58□□□□□ -1.36
LINC01088-211ENST00000515597 SARSP49591 514 aaKnown RBP6.58□□□□□ -1.36
LINC01088-211ENST00000515597 SCRN1Q12765 414 aa6.58□□□□□ -1.36
LINC01088-211ENST00000515597 VHLLQ6RSH7 139 aa6.58□□□□□ -1.36
LINC01088-211ENST00000515597 LNPKQ9C0E8 428 aa6.58□□□□□ -1.36
LINC01088-211ENST00000515597 GPRC5CQ9NQ84 441 aa6.58□□□□□ -1.36
LINC01088-211ENST00000515597 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.58□□□□□ -1.36
LINC01088-211ENST00000515597 MARCH2Q9P0N8 246 aa6.58□□□□□ -1.36
LINC01088-211ENST00000515597 CCDC9Q9Y3X0 531 aaKnown RBP6.58□□□□□ -1.36
LINC01088-211ENST00000515597 TRBV23OR9-2A0A075B6M9 112 aa6.57□□□□□ -1.36
LINC01088-211ENST00000515597 ZBTB7AO95365 584 aa6.57□□□□□ -1.36
LINC01088-211ENST00000515597 CYP2C8P10632 490 aa6.57□□□□□ -1.36
LINC01088-211ENST00000515597 ZNF761Q86XN6 746 aaPredicted RBP6.57□□□□□ -1.36
LINC01088-211ENST00000515597 PLEKHO2Q8TD55 490 aa6.57□□□□□ -1.36
LINC01088-211ENST00000515597 DPF3Q92784 378 aa6.57□□□□□ -1.36
LINC01088-211ENST00000515597 BORCS6Q96GS4 357 aa6.57□□□□□ -1.36
LINC01088-211ENST00000515597 SEC16BQ96JE7 1060 aa6.57□□□□□ -1.36
LINC01088-211ENST00000515597 GORASP1Q9BQQ3 440 aa6.57□□□□□ -1.36
LINC01088-211ENST00000515597 LGR4Q9BXB1 951 aa6.57□□□□□ -1.36
LINC01088-211ENST00000515597 BTG4Q9NY30 223 aa6.57□□□□□ -1.36
LINC01088-211ENST00000515597 ANKRD34BA5PLL1 514 aa6.56□□□□□ -1.36
LINC01088-211ENST00000515597 INSRRP14616 1297 aa6.56□□□□□ -1.36
LINC01088-211ENST00000515597 DCP2Q8IU60 420 aaKnown RBP6.56□□□□□ -1.36
LINC01088-211ENST00000515597 TEX2Q8IWB9 1127 aa6.56□□□□□ -1.36
LINC01088-211ENST00000515597 FAM26EQ8N5C1 309 aa6.56□□□□□ -1.36
LINC01088-211ENST00000515597 CPLX3Q8WVH0 158 aa6.56□□□□□ -1.36
LINC01088-211ENST00000515597 COPS5Q92905 334 aa6.56□□□□□ -1.36
LINC01088-211ENST00000515597 ACBD3Q9H3P7 528 aa6.56□□□□□ -1.36
LINC01088-211ENST00000515597 EMC9Q9Y3B6 208 aa6.56□□□□□ -1.36
LINC01088-211ENST00000515597 THBDP07204 575 aa6.55□□□□□ -1.36
LINC01088-211ENST00000515597 CASP7P55210 303 aa6.55□□□□□ -1.36
LINC01088-211ENST00000515597 PUM1Q14671 1186 aaKnown RBP eCLIP6.55□□□□□ -1.36
LINC01088-211ENST00000515597 ZNF827Q17R98 1081 aa6.55□□□□□ -1.36
LINC01088-211ENST00000515597 INF2Q27J81 1249 aa6.55□□□□□ -1.36
LINC01088-211ENST00000515597 ZXDCQ2QGD7 858 aaPredicted RBP6.55□□□□□ -1.36
LINC01088-211ENST00000515597 TTLL7Q6ZT98 887 aa6.55□□□□□ -1.36
LINC01088-211ENST00000515597 PPP1R14AQ96A00 147 aa6.55□□□□□ -1.36
LINC01088-211ENST00000515597 STRIP2Q9ULQ0 834 aa6.55□□□□□ -1.36
LINC01088-211ENST00000515597 SMARCA5O60264 1052 aaPredicted RBP6.54□□□□□ -1.36
LINC01088-211ENST00000515597 FPR2P25090 351 aa6.54□□□□□ -1.36
LINC01088-211ENST00000515597 GTF2IRD2BQ6EKJ0 949 aa6.54□□□□□ -1.36
LINC01088-211ENST00000515597 GTF2IRD2Q86UP8 949 aa6.54□□□□□ -1.36
LINC01088-211ENST00000515597 STK32CQ86UX6 486 aa6.54□□□□□ -1.36
LINC01088-211ENST00000515597 LINC00482Q8N8I6 264 aa6.54□□□□□ -1.36
LINC01088-211ENST00000515597 ADAMTS17Q8TE56 1095 aa6.54□□□□□ -1.36
LINC01088-211ENST00000515597 MMP19Q99542 508 aa6.54□□□□□ -1.36
LINC01088-211ENST00000515597 CCSER2Q9H7U1 834 aa6.54□□□□□ -1.36
LINC01088-211ENST00000515597 INPP5FQ9Y2H2 1132 aa6.54□□□□□ -1.36
LINC01088-211ENST00000515597 SGSM2O43147 1006 aa6.53□□□□□ -1.36
LINC01088-211ENST00000515597 THBS2P35442 1172 aa6.53□□□□□ -1.36
LINC01088-211ENST00000515597 ETV3LQ6ZN32 361 aa6.53□□□□□ -1.36
LINC01088-211ENST00000515597 TRIM59Q8IWR1 403 aa6.53□□□□□ -1.36
LINC01088-211ENST00000515597 BVESQ8NE79 360 aa6.53□□□□□ -1.36
LINC01088-211ENST00000515597 ANAPC16Q96DE5 110 aa6.53□□□□□ -1.36
LINC01088-211ENST00000515597 GPR20Q99678 358 aa6.53□□□□□ -1.36
LINC01088-211ENST00000515597 C11orf84Q9BUA3 381 aaPredicted RBP6.53□□□□□ -1.36
LINC01088-211ENST00000515597 AP5M1Q9H0R1 490 aa6.53□□□□□ -1.36
LINC01088-211ENST00000515597 CNOT11Q9UKZ1 510 aaKnown RBP6.53□□□□□ -1.36
LINC01088-211ENST00000515597 C22orf46C9J442 243 aa6.52□□□□□ -1.37
LINC01088-211ENST00000515597 ITGB3P05106 788 aa6.52□□□□□ -1.37
LINC01088-211ENST00000515597 MAGEA10P43363 369 aaPredicted RBP6.52□□□□□ -1.37
LINC01088-211ENST00000515597 CYP4F3Q08477 520 aa6.52□□□□□ -1.37
LINC01088-211ENST00000515597 POMZP3Q6PJE2 187 aa6.52□□□□□ -1.37
LINC01088-211ENST00000515597 CD300LDQ6UXZ3 194 aa6.52□□□□□ -1.37
LINC01088-211ENST00000515597 CRACR2BQ8N4Y2 399 aaPredicted RBP6.52□□□□□ -1.37
LINC01088-211ENST00000515597 FRS2Q8WU20 508 aa6.52□□□□□ -1.37
LINC01088-211ENST00000515597 APBA2Q99767 749 aa6.52□□□□□ -1.37
LINC01088-211ENST00000515597 TMPRSS5Q9H3S3 457 aa6.52□□□□□ -1.37
LINC01088-211ENST00000515597 PALD1Q9ULE6 856 aa6.52□□□□□ -1.37
LINC01088-211ENST00000515597 NOP56O00567 594 aaKnown RBP6.51□□□□□ -1.37
LINC01088-211ENST00000515597 TBX1O43435 398 aa6.51□□□□□ -1.37
LINC01088-211ENST00000515597 ATF4P18848 351 aaPredicted RBP6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms