RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 ARFGAP3Q9NP61 516 aa8.32□□□□□ -1.08
CLIP1-205ENST00000514271 ANAPC4Q9UJX5 808 aa8.32□□□□□ -1.08
CLIP1-205ENST00000514271 POLR2AP24928 1970 aaKnown RBP8.32□□□□□ -1.08
CLIP1-205ENST00000514271 FLT1P17948 1338 aa8.31□□□□□ -1.08
CLIP1-205ENST00000514271 WNT7AO00755 349 aa8.31□□□□□ -1.08
CLIP1-205ENST00000514271 TEX33O43247 280 aa8.31□□□□□ -1.08
CLIP1-205ENST00000514271 CBFA2T2O43439 604 aa8.31□□□□□ -1.08
CLIP1-205ENST00000514271 KINO60870 393 aaKnown RBP8.31□□□□□ -1.08
CLIP1-205ENST00000514271 FMNL1O95466 1100 aaPredicted RBP8.31□□□□□ -1.08
CLIP1-205ENST00000514271 IL17AQ16552 155 aa8.31□□□□□ -1.08
CLIP1-205ENST00000514271 LDLRAD1Q5T700 205 aa8.31□□□□□ -1.08
CLIP1-205ENST00000514271 BICD2Q8TD16 824 aa8.31□□□□□ -1.08
CLIP1-205ENST00000514271 RNF41Q9H4P4 317 aaPredicted RBP8.31□□□□□ -1.08
CLIP1-205ENST00000514271 TDRD3Q9H7E2 651 aaKnown RBP8.31□□□□□ -1.08
CLIP1-205ENST00000514271 VEZTQ9HBM0 779 aa8.31□□□□□ -1.08
CLIP1-205ENST00000514271 AATFQ9NY61 560 aaKnown RBP eCLIP8.31□□□□□ -1.08
CLIP1-205ENST00000514271 PLIN4Q96Q06 1357 aa8.31□□□□□ -1.08
CLIP1-205ENST00000514271 C5orf60A6NFR6 353 aa8.31□□□□□ -1.08
CLIP1-205ENST00000514271 H0YGN5 161 aa8.31□□□□□ -1.08
CLIP1-205ENST00000514271 CA12O43570 354 aa8.31□□□□□ -1.08
CLIP1-205ENST00000514271 CTNND1O60716 968 aaKnown RBP8.31□□□□□ -1.08
CLIP1-205ENST00000514271 MAP2K2P36507 400 aa8.31□□□□□ -1.08
CLIP1-205ENST00000514271 PKN1Q16512 942 aa8.31□□□□□ -1.08
CLIP1-205ENST00000514271 COG1Q8WTW3 980 aa8.31□□□□□ -1.08
CLIP1-205ENST00000514271 GTF3C2Q8WUA4 911 aaPredicted RBP8.31□□□□□ -1.08
CLIP1-205ENST00000514271 STRBPQ96SI9 672 aaKnown RBP8.31□□□□□ -1.08
CLIP1-205ENST00000514271 SH2D4AQ9H788 454 aa8.31□□□□□ -1.08
CLIP1-205ENST00000514271 NFS1Q9Y697 457 aa8.31□□□□□ -1.08
CLIP1-205ENST00000514271 LOC285556D6RIA3 1793 aa8.31□□□□□ -1.08
CLIP1-205ENST00000514271 GOLGA6L19H0YKK7 550 aa8.31□□□□□ -1.08
CLIP1-205ENST00000514271 RBAK-RBAKDNI3L0D1 243 aa8.31□□□□□ -1.08
CLIP1-205ENST00000514271 PDE2AO00408 941 aaPredicted RBP8.31□□□□□ -1.08
CLIP1-205ENST00000514271 UBASH3AP57075 661 aa8.31□□□□□ -1.08
CLIP1-205ENST00000514271 CHMP4BP1P59074 171 aa8.31□□□□□ -1.08
CLIP1-205ENST00000514271 FOXR2Q6PJQ5 311 aa8.31□□□□□ -1.08
CLIP1-205ENST00000514271 CREG2Q8IUH2 290 aa8.31□□□□□ -1.08
CLIP1-205ENST00000514271 SEC14L1Q92503 715 aa8.31□□□□□ -1.08
CLIP1-205ENST00000514271 UBXN4Q92575 508 aa8.31□□□□□ -1.08
CLIP1-205ENST00000514271 TEPSINQ96N21 525 aa8.31□□□□□ -1.08
CLIP1-205ENST00000514271 MXD3Q9BW11 206 aa8.31□□□□□ -1.08
CLIP1-205ENST00000514271 FOXP1Q9H334 677 aaPredicted RBP8.31□□□□□ -1.08
CLIP1-205ENST00000514271 FAM198AQ9UFP1 575 aa8.31□□□□□ -1.08
CLIP1-205ENST00000514271 MCM8Q9UJA3 840 aa8.31□□□□□ -1.08
CLIP1-205ENST00000514271 FAN1Q9Y2M0 1017 aa8.31□□□□□ -1.08
CLIP1-205ENST00000514271 SLC45A1Q9Y2W3 748 aa8.31□□□□□ -1.08
CLIP1-205ENST00000514271 CSADQ9Y600 493 aa8.31□□□□□ -1.08
CLIP1-205ENST00000514271 MMP1P03956 469 aa8.3□□□□□ -1.08
CLIP1-205ENST00000514271 PAEPP09466 180 aa8.3□□□□□ -1.08
CLIP1-205ENST00000514271 DIXDC1Q155Q3 683 aa8.3□□□□□ -1.08
CLIP1-205ENST00000514271 HS6ST3Q8IZP7 471 aa8.3□□□□□ -1.08
CLIP1-205ENST00000514271 MICALL1Q8N3F8 863 aa8.3□□□□□ -1.08
CLIP1-205ENST00000514271 ABHD10Q9NUJ1 306 aa8.3□□□□□ -1.08
CLIP1-205ENST00000514271 RCCD1A6NED2 376 aa8.3□□□□□ -1.08
CLIP1-205ENST00000514271 ERICH4A6NGS2 130 aa8.3□□□□□ -1.08
CLIP1-205ENST00000514271 ZNF263O14978 683 aa8.3□□□□□ -1.08
CLIP1-205ENST00000514271 MBD4O95243 580 aa8.3□□□□□ -1.08
CLIP1-205ENST00000514271 FGAP02671 866 aa8.3□□□□□ -1.08
CLIP1-205ENST00000514271 RBL2Q08999 1139 aa8.3□□□□□ -1.08
CLIP1-205ENST00000514271 SREBF2Q12772 1141 aa8.3□□□□□ -1.08
CLIP1-205ENST00000514271 STK3Q13188 491 aa8.3□□□□□ -1.08
CLIP1-205ENST00000514271 SF3A1Q15459 793 aaKnown RBP8.3□□□□□ -1.08
CLIP1-205ENST00000514271 ZNF568Q3ZCX4 644 aa8.3□□□□□ -1.08
CLIP1-205ENST00000514271 PIP4P2Q8N4L2 257 aa8.3□□□□□ -1.08
CLIP1-205ENST00000514271 CEP112Q8N8E3 955 aa8.3□□□□□ -1.08
CLIP1-205ENST00000514271 ZNF384Q8TF68 577 aa8.3□□□□□ -1.08
CLIP1-205ENST00000514271 SIP14410 1827 aa8.3□□□□□ -1.08
CLIP1-205ENST00000514271 ANKRD33BA6NCL7 494 aa8.3□□□□□ -1.08
CLIP1-205ENST00000514271 MANSC4A6NHS7 340 aaPredicted RBP8.3□□□□□ -1.08
CLIP1-205ENST00000514271 UBE2Q2LH0YL09 131 aa8.3□□□□□ -1.08
CLIP1-205ENST00000514271 GPAA1O43292 621 aa8.3□□□□□ -1.08
CLIP1-205ENST00000514271 ALDH1A1P00352 501 aa8.3□□□□□ -1.08
CLIP1-205ENST00000514271 PPATQ06203 517 aa8.3□□□□□ -1.08
CLIP1-205ENST00000514271 PLCB4Q15147 1175 aa8.3□□□□□ -1.08
CLIP1-205ENST00000514271 SEC23AQ15436 765 aa8.3□□□□□ -1.08
CLIP1-205ENST00000514271 GRIK5Q16478 980 aa8.3□□□□□ -1.08
CLIP1-205ENST00000514271 TTMPQ5BVD1 217 aa8.3□□□□□ -1.08
CLIP1-205ENST00000514271 FIGNQ5HY92 759 aa8.3□□□□□ -1.08
CLIP1-205ENST00000514271 PI16Q6UXB8 463 aa8.3□□□□□ -1.08
CLIP1-205ENST00000514271 TADA2BQ86TJ2 420 aa8.3□□□□□ -1.08
CLIP1-205ENST00000514271 EIF1ADQ8N9N8 165 aaKnown RBP8.3□□□□□ -1.08
CLIP1-205ENST00000514271 SH3RF3Q8TEJ3 882 aaPredicted RBP8.3□□□□□ -1.08
CLIP1-205ENST00000514271 TXLNGYQ9BZA5 131 aa8.3□□□□□ -1.08
CLIP1-205ENST00000514271 ARGLU1Q9NWB6 273 aaPredicted RBP8.3□□□□□ -1.08
CLIP1-205ENST00000514271 JRKLQ9Y4A0 524 aa8.3□□□□□ -1.08
CLIP1-205ENST00000514271 NDUFB9Q9Y6M9 179 aa8.3□□□□□ -1.08
CLIP1-205ENST00000514271 MYH10P35580 1976 aa8.29□□□□□ -1.08
CLIP1-205ENST00000514271 SSC5DA1L4H1 1573 aa8.29□□□□□ -1.08
CLIP1-205ENST00000514271 A0A1W2PQC6 194 aa8.29□□□□□ -1.08
CLIP1-205ENST00000514271 HAX1O00165 279 aa8.29□□□□□ -1.08
CLIP1-205ENST00000514271 CXCL11O14625 94 aa8.29□□□□□ -1.08
CLIP1-205ENST00000514271 KLRC4O43908 158 aa8.29□□□□□ -1.08
CLIP1-205ENST00000514271 CELF2O95319 508 aaKnown RBP8.29□□□□□ -1.08
CLIP1-205ENST00000514271 MRPL12P52815 198 aaKnown RBP8.29□□□□□ -1.08
CLIP1-205ENST00000514271 NOGQ13253 232 aa8.29□□□□□ -1.08
CLIP1-205ENST00000514271 PPIL2Q13356 520 aa8.29□□□□□ -1.08
CLIP1-205ENST00000514271 TNFAIP8L3Q5GJ75 292 aa8.29□□□□□ -1.08
CLIP1-205ENST00000514271 APOA5Q6Q788 366 aa8.29□□□□□ -1.08
CLIP1-205ENST00000514271 CCNI2Q6ZMN8 369 aaPredicted RBP8.29□□□□□ -1.08
CLIP1-205ENST00000514271 CCDC73Q6ZRK6 1079 aa8.29□□□□□ -1.08
CLIP1-205ENST00000514271 MMS22LQ6ZRQ5 1243 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms