RNA–Protein interactions for RNA: ENST00000513525.1

CCL28-203, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best) BASIC

Gene CCL28, Length 1,518 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-203ENST00000513525 TRIM43BA6NCK2 446 aa11.5□□□□□ -0.57
CCL28-203ENST00000513525 B4E1Z4 1266 aa11.5□□□□□ -0.57
CCL28-203ENST00000513525 KIAA0355O15063 1070 aa11.5□□□□□ -0.57
CCL28-203ENST00000513525 CTAGE5O15320 804 aa11.5□□□□□ -0.57
CCL28-203ENST00000513525 EPB41L2O43491 1005 aaKnown RBP11.5□□□□□ -0.57
CCL28-203ENST00000513525 ASGR1P07306 291 aa11.5□□□□□ -0.57
CCL28-203ENST00000513525 TNFAIP2Q03169 654 aa11.5□□□□□ -0.57
CCL28-203ENST00000513525 PNMA1Q8ND90 353 aa11.5□□□□□ -0.57
CCL28-203ENST00000513525 BADQ92934 168 aa11.5□□□□□ -0.57
CCL28-203ENST00000513525 TRIM43Q96BQ3 446 aaPredicted RBP11.5□□□□□ -0.57
CCL28-203ENST00000513525 GLT1D1Q96MS3 346 aa11.5□□□□□ -0.57
CCL28-203ENST00000513525 ZKSCAN3Q9BRR0 538 aa11.5□□□□□ -0.57
CCL28-203ENST00000513525 USP26Q9BXU7 913 aa11.5□□□□□ -0.57
CCL28-203ENST00000513525 MAF1Q9H063 256 aa11.5□□□□□ -0.57
CCL28-203ENST00000513525 IL25Q9H293 177 aa11.5□□□□□ -0.57
CCL28-203ENST00000513525 CNNM2Q9H8M5 875 aa11.5□□□□□ -0.57
CCL28-203ENST00000513525 VTA1Q9NP79 307 aa11.5□□□□□ -0.57
CCL28-203ENST00000513525 ADD3Q9UEY8 706 aaKnown RBP11.5□□□□□ -0.57
CCL28-203ENST00000513525 GNEQ9Y223 722 aaKnown RBP11.5□□□□□ -0.57
CCL28-203ENST00000513525 NFIBO00712 420 aa11.49□□□□□ -0.57
CCL28-203ENST00000513525 CDK7P50613 346 aa11.49□□□□□ -0.57
CCL28-203ENST00000513525 ALDH5A1P51649 535 aaPredicted RBP11.49□□□□□ -0.57
CCL28-203ENST00000513525 FAAP100Q0VG06 881 aa11.49□□□□□ -0.57
CCL28-203ENST00000513525 TAPT1Q6NXT6 567 aa11.49□□□□□ -0.57
CCL28-203ENST00000513525 PLPP6Q8IY26 295 aa11.49□□□□□ -0.57
CCL28-203ENST00000513525 ENAHQ8N8S7 591 aaPredicted RBP11.49□□□□□ -0.57
CCL28-203ENST00000513525 CLEC4DQ8WXI8 215 aa11.49□□□□□ -0.57
CCL28-203ENST00000513525 ZSCAN10Q96SZ4 725 aaPredicted RBP11.49□□□□□ -0.57
CCL28-203ENST00000513525 KRT23Q9C075 422 aa11.49□□□□□ -0.57
CCL28-203ENST00000513525 ZSWIM5Q9P217 1185 aa11.49□□□□□ -0.57
CCL28-203ENST00000513525 Q9Y3F1 56 aa11.49□□□□□ -0.57
CCL28-203ENST00000513525 TANC1Q9C0D5 1861 aa11.48□□□□□ -0.57
CCL28-203ENST00000513525 CDH23Q9H251 3354 aa11.48□□□□□ -0.57
CCL28-203ENST00000513525 TNKSO95271 1327 aa11.48□□□□□ -0.57
CCL28-203ENST00000513525 TRIP12Q14669 1992 aaPredicted RBP11.48□□□□□ -0.57
CCL28-203ENST00000513525 A0A0U1RQG5 324 aaPredicted RBP11.48□□□□□ -0.57
CCL28-203ENST00000513525 DCDC2CA8MYV0 355 aa11.48□□□□□ -0.57
CCL28-203ENST00000513525 PQBP1O60828 265 aaKnown RBP11.48□□□□□ -0.57
CCL28-203ENST00000513525 ITGB8P26012 769 aa11.48□□□□□ -0.57
CCL28-203ENST00000513525 BAATQ14032 418 aaPredicted RBP11.48□□□□□ -0.57
CCL28-203ENST00000513525 RABEP1Q15276 862 aa11.48□□□□□ -0.57
CCL28-203ENST00000513525 ASPRV1Q53RT3 343 aa11.48□□□□□ -0.57
CCL28-203ENST00000513525 GNASQ5JWF2 1037 aa11.48□□□□□ -0.57
CCL28-203ENST00000513525 IQSEC1Q6DN90 963 aa11.48□□□□□ -0.57
CCL28-203ENST00000513525 TLK2Q86UE8 772 aa11.48□□□□□ -0.57
CCL28-203ENST00000513525 KIF2CQ99661 725 aa11.48□□□□□ -0.57
CCL28-203ENST00000513525 KAT14Q9H8E8 782 aa11.48□□□□□ -0.57
CCL28-203ENST00000513525 PTPDC1A2A3K4 754 aa11.47□□□□□ -0.57
CCL28-203ENST00000513525 ARVCFO00192 962 aa11.47□□□□□ -0.57
CCL28-203ENST00000513525 RAG1P15918 1043 aa11.47□□□□□ -0.57
CCL28-203ENST00000513525 SMPD1P17405 629 aa11.47□□□□□ -0.57
CCL28-203ENST00000513525 CHMLP26374 656 aa11.47□□□□□ -0.57
CCL28-203ENST00000513525 SHHQ15465 462 aa11.47□□□□□ -0.57
CCL28-203ENST00000513525 FAM109BQ6ICB4 259 aaPredicted RBP11.47□□□□□ -0.57
CCL28-203ENST00000513525 SLC30A10Q6XR72 485 aa11.47□□□□□ -0.57
CCL28-203ENST00000513525 RNF207Q6ZRF8 634 aa11.47□□□□□ -0.57
CCL28-203ENST00000513525 FBXO16Q8IX29 292 aaPredicted RBP11.47□□□□□ -0.57
CCL28-203ENST00000513525 DEFB123Q8N688 67 aa11.47□□□□□ -0.57
CCL28-203ENST00000513525 RGS22Q8NE09 1264 aa11.47□□□□□ -0.57
CCL28-203ENST00000513525 IL27Q8NEV9 243 aa11.47□□□□□ -0.57
CCL28-203ENST00000513525 DNERQ8NFT8 737 aa11.47□□□□□ -0.57
CCL28-203ENST00000513525 RUFY2Q8WXA3 655 aa11.47□□□□□ -0.57
CCL28-203ENST00000513525 PURBQ96QR8 312 aaKnown RBP11.47□□□□□ -0.57
CCL28-203ENST00000513525 ESYT1Q9BSJ8 1104 aa11.47□□□□□ -0.57
CCL28-203ENST00000513525 PDGFCQ9NRA1 345 aa11.47□□□□□ -0.57
CCL28-203ENST00000513525 TMEM39AQ9NV64 488 aa11.47□□□□□ -0.57
CCL28-203ENST00000513525 TBX21Q9UL17 535 aa11.47□□□□□ -0.57
CCL28-203ENST00000513525 VPS9D1Q9Y2B5 631 aa11.47□□□□□ -0.57
CCL28-203ENST00000513525 SCN5AQ14524 2016 aa11.47□□□□□ -0.57
CCL28-203ENST00000513525 RBM47A0AV96 593 aaKnown RBP11.46□□□□□ -0.57
CCL28-203ENST00000513525 CABYRO75952 493 aa11.46□□□□□ -0.57
CCL28-203ENST00000513525 GOLGA8HP0CJ92 632 aa11.46□□□□□ -0.57
CCL28-203ENST00000513525 EDNRBP24530 442 aa11.46□□□□□ -0.57
CCL28-203ENST00000513525 RPS6P62753 249 aaKnown RBP11.46□□□□□ -0.57
CCL28-203ENST00000513525 FSCN1Q16658 493 aaKnown RBP11.46□□□□□ -0.57
CCL28-203ENST00000513525 DUSP28Q4G0W2 176 aa11.46□□□□□ -0.57
CCL28-203ENST00000513525 C9orf50Q5SZB4 431 aa11.46□□□□□ -0.57
CCL28-203ENST00000513525 EEPD1Q7L9B9 569 aa11.46□□□□□ -0.57
CCL28-203ENST00000513525 SLC43A3Q8NBI5 491 aa11.46□□□□□ -0.57
CCL28-203ENST00000513525 MPHOSPH6Q99547 160 aaKnown RBP11.46□□□□□ -0.57
CCL28-203ENST00000513525 UBAC1Q9BSL1 405 aa11.46□□□□□ -0.57
CCL28-203ENST00000513525 SEZ6LQ9BYH1 1024 aa11.46□□□□□ -0.57
CCL28-203ENST00000513525 AP5M1Q9H0R1 490 aa11.46□□□□□ -0.57
CCL28-203ENST00000513525 MTMR10Q9NXD2 777 aa11.46□□□□□ -0.57
CCL28-203ENST00000513525 DDX49Q9Y6V7 483 aaKnown RBP11.46□□□□□ -0.57
CCL28-203ENST00000513525 ABCB11O95342 1321 aa11.46□□□□□ -0.58
CCL28-203ENST00000513525 ZEB2O60315 1214 aa11.45□□□□□ -0.58
CCL28-203ENST00000513525 TIMP1P01033 207 aa11.45□□□□□ -0.58
CCL28-203ENST00000513525 PARP1P09874 1014 aaKnown RBP11.45□□□□□ -0.58
CCL28-203ENST00000513525 CALML3P27482 149 aa11.45□□□□□ -0.58
CCL28-203ENST00000513525 BEX3Q00994 111 aa11.45□□□□□ -0.58
CCL28-203ENST00000513525 SEC23AQ15436 765 aa11.45□□□□□ -0.58
CCL28-203ENST00000513525 CDC37Q16543 378 aaPredicted RBP11.45□□□□□ -0.58
CCL28-203ENST00000513525 KIAA1211Q6ZU35 1233 aa11.45□□□□□ -0.58
CCL28-203ENST00000513525 NOL8Q76FK4 1167 aaKnown RBP11.45□□□□□ -0.58
CCL28-203ENST00000513525 Q7L0L9 218 aa11.45□□□□□ -0.58
CCL28-203ENST00000513525 FAM126BQ8IXS8 530 aa11.45□□□□□ -0.58
CCL28-203ENST00000513525 ADGRF4Q8IZF3 695 aa11.45□□□□□ -0.58
CCL28-203ENST00000513525 UBA5Q9GZZ9 404 aa11.45□□□□□ -0.58
CCL28-203ENST00000513525 CPVLQ9H3G5 476 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms