RNA–Protein interactions for RNA: ENST00000512756.5

COL11A1-210, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL11A1, Length 5,442 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-210ENST00000512756 SIK1P57059 783 aa13.61□□□□□ -0.23
COL11A1-210ENST00000512756 MUM1Q2TAK8 710 aa13.61□□□□□ -0.23
COL11A1-210ENST00000512756 CEP120Q8N960 986 aa13.61□□□□□ -0.23
COL11A1-210ENST00000512756 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.61□□□□□ -0.23
COL11A1-210ENST00000512756 BSPRYQ5W0U4 402 aa13.61□□□□□ -0.23
COL11A1-210ENST00000512756 TMC4Q7Z404 712 aa13.61□□□□□ -0.23
COL11A1-210ENST00000512756 MAP7D3Q8IWC1 876 aa13.61□□□□□ -0.23
COL11A1-210ENST00000512756 MAGOHBQ96A72 148 aaKnown RBP13.61□□□□□ -0.23
COL11A1-210ENST00000512756 NACA2Q9H009 215 aa13.61□□□□□ -0.23
COL11A1-210ENST00000512756 DAAM1Q9Y4D1 1078 aa13.61□□□□□ -0.23
COL11A1-210ENST00000512756 USP6P35125 1406 aa13.61□□□□□ -0.23
COL11A1-210ENST00000512756 CDK12Q9NYV4 1490 aaPredicted RBP13.61□□□□□ -0.23
COL11A1-210ENST00000512756 CEP170Q5SW79 1584 aa13.61□□□□□ -0.23
COL11A1-210ENST00000512756 RPAP1Q9BWH6 1393 aaPredicted RBP13.6□□□□□ -0.23
COL11A1-210ENST00000512756 TTLL1O95922 423 aa13.6□□□□□ -0.23
COL11A1-210ENST00000512756 PTPN12Q05209 780 aaKnown RBP13.6□□□□□ -0.23
COL11A1-210ENST00000512756 GABPAQ06546 454 aa13.6□□□□□ -0.23
COL11A1-210ENST00000512756 SF3A3Q12874 501 aaKnown RBP eCLIP13.6□□□□□ -0.23
COL11A1-210ENST00000512756 SCYL2Q6P3W7 929 aa13.6□□□□□ -0.23
COL11A1-210ENST00000512756 WDR11Q9BZH6 1224 aa13.6□□□□□ -0.23
COL11A1-210ENST00000512756 PGRMC1O00264 195 aaKnown RBP13.6□□□□□ -0.23
COL11A1-210ENST00000512756 ENC1O14682 589 aa13.6□□□□□ -0.23
COL11A1-210ENST00000512756 ARHGAP4P98171 946 aa13.6□□□□□ -0.23
COL11A1-210ENST00000512756 CYP4A11Q02928 519 aa13.6□□□□□ -0.23
COL11A1-210ENST00000512756 LRCH2Q5VUJ6 765 aa13.6□□□□□ -0.23
COL11A1-210ENST00000512756 LRRC8CQ8TDW0 803 aa13.6□□□□□ -0.23
COL11A1-210ENST00000512756 OSBP2Q969R2 916 aa13.6□□□□□ -0.23
COL11A1-210ENST00000512756 ZNF277Q9NRM2 450 aaPredicted RBP13.6□□□□□ -0.23
COL11A1-210ENST00000512756 INTS9Q9NV88 658 aaKnown RBP13.6□□□□□ -0.23
COL11A1-210ENST00000512756 CFAP74Q9C0B2 1584 aa13.6□□□□□ -0.23
COL11A1-210ENST00000512756 CNGA1P29973 690 aa13.6□□□□□ -0.23
COL11A1-210ENST00000512756 PPP2R5AQ15172 486 aa13.6□□□□□ -0.23
COL11A1-210ENST00000512756 PBKQ96KB5 322 aa13.6□□□□□ -0.23
COL11A1-210ENST00000512756 FAN1Q9Y2M0 1017 aa13.6□□□□□ -0.23
COL11A1-210ENST00000512756 THRAP3Q9Y2W1 955 aaKnown RBP13.6□□□□□ -0.23
COL11A1-210ENST00000512756 EVI5O60447 810 aa13.6□□□□□ -0.23
COL11A1-210ENST00000512756 HEXIM1O94992 359 aaKnown RBP13.6□□□□□ -0.23
COL11A1-210ENST00000512756 IL9RQ01113 521 aa13.6□□□□□ -0.23
COL11A1-210ENST00000512756 FAM186BQ8IYM0 893 aa13.6□□□□□ -0.23
COL11A1-210ENST00000512756 POMGNT1Q8WZA1 660 aa13.6□□□□□ -0.23
COL11A1-210ENST00000512756 SPTLC3Q9NUV7 552 aa13.6□□□□□ -0.23
COL11A1-210ENST00000512756 SLC5A4Q9NY91 659 aa13.6□□□□□ -0.23
COL11A1-210ENST00000512756 LIG3P49916 1009 aa13.59□□□□□ -0.23
COL11A1-210ENST00000512756 ARL6IP4Q66PJ3 421 aaKnown RBP13.59□□□□□ -0.23
COL11A1-210ENST00000512756 ARMC9Q7Z3E5 817 aa13.59□□□□□ -0.23
COL11A1-210ENST00000512756 ADAT2Q7Z6V5 191 aaKnown RBP13.59□□□□□ -0.23
COL11A1-210ENST00000512756 PI4K2BQ8TCG2 481 aa13.59□□□□□ -0.23
COL11A1-210ENST00000512756 VCX3AQ9NNX9 186 aa13.59□□□□□ -0.23
COL11A1-210ENST00000512756 TTLL3Q9Y4R7 772 aa13.59□□□□□ -0.23
COL11A1-210ENST00000512756 EFCAB6Q5THR3 1501 aa13.59□□□□□ -0.23
COL11A1-210ENST00000512756 ARHGAP42A6NI28 874 aa13.59□□□□□ -0.23
COL11A1-210ENST00000512756 RINT1Q6NUQ1 792 aa13.59□□□□□ -0.23
COL11A1-210ENST00000512756 CCDC197Q8NCU1 140 aa13.59□□□□□ -0.23
COL11A1-210ENST00000512756 CDKL2Q92772 493 aa13.59□□□□□ -0.23
COL11A1-210ENST00000512756 RIPOR2Q9Y4F9 1068 aa13.59□□□□□ -0.23
COL11A1-210ENST00000512756 CSADQ9Y600 493 aa13.59□□□□□ -0.23
COL11A1-210ENST00000512756 ABCD1P33897 745 aa13.59□□□□□ -0.23
COL11A1-210ENST00000512756 CRKLP46109 303 aaKnown RBP13.59□□□□□ -0.23
COL11A1-210ENST00000512756 RNASELQ05823 741 aaKnown RBP13.59□□□□□ -0.23
COL11A1-210ENST00000512756 PABPC4Q13310 644 aaKnown RBP eCLIP13.59□□□□□ -0.23
COL11A1-210ENST00000512756 MESDQ14696 234 aa13.59□□□□□ -0.23
COL11A1-210ENST00000512756 RPS6KA2Q15349 733 aa13.59□□□□□ -0.23
COL11A1-210ENST00000512756 PTPROQ16827 1216 aa13.59□□□□□ -0.23
COL11A1-210ENST00000512756 KIAA0825Q8IV33 1275 aa13.59□□□□□ -0.23
COL11A1-210ENST00000512756 ATP6V0A1Q93050 837 aa13.59□□□□□ -0.23
COL11A1-210ENST00000512756 CSRNP1Q96S65 589 aa13.59□□□□□ -0.23
COL11A1-210ENST00000512756 ECM2O94769 699 aaPredicted RBP13.59□□□□□ -0.23
COL11A1-210ENST00000512756 CCT5P48643 541 aa13.59□□□□□ -0.23
COL11A1-210ENST00000512756 SCNN1DP51172 638 aa13.59□□□□□ -0.23
COL11A1-210ENST00000512756 POLGP54098 1239 aaPredicted RBP13.59□□□□□ -0.23
COL11A1-210ENST00000512756 SARM1Q6SZW1 724 aa13.59□□□□□ -0.23
COL11A1-210ENST00000512756 METTL13Q8N6R0 699 aa13.59□□□□□ -0.23
COL11A1-210ENST00000512756 TBCKQ8TEA7 893 aa13.59□□□□□ -0.23
COL11A1-210ENST00000512756 GBP5Q96PP8 586 aa13.59□□□□□ -0.23
COL11A1-210ENST00000512756 EPB41L5Q9HCM4 733 aa13.59□□□□□ -0.23
COL11A1-210ENST00000512756 CCPG1Q9ULG6 757 aa13.59□□□□□ -0.23
COL11A1-210ENST00000512756 METP08581 1390 aa13.59□□□□□ -0.23
COL11A1-210ENST00000512756 IFT122Q9HBG6 1241 aa13.58□□□□□ -0.23
COL11A1-210ENST00000512756 ERVV-1B6SEH8 477 aa13.58□□□□□ -0.24
COL11A1-210ENST00000512756 CAPN9O14815 690 aa13.58□□□□□ -0.24
COL11A1-210ENST00000512756 FAM160B1Q5W0V3 765 aa13.58□□□□□ -0.24
COL11A1-210ENST00000512756 SMYD4Q8IYR2 804 aaPredicted RBP13.58□□□□□ -0.24
COL11A1-210ENST00000512756 ACCSQ96QU6 501 aa13.58□□□□□ -0.24
COL11A1-210ENST00000512756 PUS7LQ9H0K6 701 aaKnown RBP13.58□□□□□ -0.24
COL11A1-210ENST00000512756 TMEM206Q9H813 350 aa13.58□□□□□ -0.24
COL11A1-210ENST00000512756 USP21Q9UK80 565 aa13.58□□□□□ -0.24
COL11A1-210ENST00000512756 CD2APQ9Y5K6 639 aa13.58□□□□□ -0.24
COL11A1-210ENST00000512756 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.58□□□□□ -0.24
COL11A1-210ENST00000512756 GARSP41250 739 aaKnown RBP13.58□□□□□ -0.24
COL11A1-210ENST00000512756 NR5A1Q13285 461 aa13.58□□□□□ -0.24
COL11A1-210ENST00000512756 NAA35Q5VZE5 725 aa13.58□□□□□ -0.24
COL11A1-210ENST00000512756 GSDMBQ8TAX9 411 aa13.58□□□□□ -0.24
COL11A1-210ENST00000512756 CNKSR1Q969H4 720 aa13.58□□□□□ -0.24
COL11A1-210ENST00000512756 NACC1Q96RE7 527 aa13.58□□□□□ -0.24
COL11A1-210ENST00000512756 FTOQ9C0B1 505 aaKnown RBP eCLIP13.58□□□□□ -0.24
COL11A1-210ENST00000512756 Q9H521 79 aa13.58□□□□□ -0.24
COL11A1-210ENST00000512756 ZSWIM5Q9P217 1185 aa13.58□□□□□ -0.24
COL11A1-210ENST00000512756 MYO5CQ9NQX4 1742 aa13.58□□□□□ -0.24
COL11A1-210ENST00000512756 PIK3CAP42336 1068 aa13.58□□□□□ -0.24
COL11A1-210ENST00000512756 USPL1Q5W0Q7 1092 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms