RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 EXT2Q93063 718 aa9.69□□□□□ -0.86
VCAN-208ENST00000512590 NDEL1Q9GZM8 345 aa9.69□□□□□ -0.86
VCAN-208ENST00000512590 PALD1Q9ULE6 856 aa9.69□□□□□ -0.86
VCAN-208ENST00000512590 PCDHB4Q9Y5E5 795 aa9.69□□□□□ -0.86
VCAN-208ENST00000512590 KPNA1P52294 538 aaPredicted RBP9.69□□□□□ -0.86
VCAN-208ENST00000512590 HSP90AA5PQ58FG0 334 aa9.69□□□□□ -0.86
VCAN-208ENST00000512590 CDHR1Q96JP9 859 aa9.69□□□□□ -0.86
VCAN-208ENST00000512590 XAB2Q9HCS7 855 aaKnown RBP9.69□□□□□ -0.86
VCAN-208ENST00000512590 ATP8A2Q9NTI2 1148 aa9.69□□□□□ -0.86
VCAN-208ENST00000512590 TEX14Q8IWB6 1497 aa9.69□□□□□ -0.86
VCAN-208ENST00000512590 KDM3AQ9Y4C1 1321 aa9.69□□□□□ -0.86
VCAN-208ENST00000512590 LRRC53A6NM62 1247 aa9.69□□□□□ -0.86
VCAN-208ENST00000512590 TAF5LO75529 589 aa9.69□□□□□ -0.86
VCAN-208ENST00000512590 DDAH1O94760 285 aa9.69□□□□□ -0.86
VCAN-208ENST00000512590 RALAP11233 206 aa9.69□□□□□ -0.86
VCAN-208ENST00000512590 SMC5Q8IY18 1101 aa9.69□□□□□ -0.86
VCAN-208ENST00000512590 THNSL1Q8IYQ7 743 aa9.69□□□□□ -0.86
VCAN-208ENST00000512590 TEX9Q8N6V9 391 aa9.69□□□□□ -0.86
VCAN-208ENST00000512590 GOLGA5Q8TBA6 731 aa9.69□□□□□ -0.86
VCAN-208ENST00000512590 SPATA18Q8TC71 538 aa9.69□□□□□ -0.86
VCAN-208ENST00000512590 FAM89AQ96GI7 184 aa9.69□□□□□ -0.86
VCAN-208ENST00000512590 CEP19Q96LK0 163 aa9.69□□□□□ -0.86
VCAN-208ENST00000512590 GEMIN8Q9NWZ8 242 aaKnown RBP9.69□□□□□ -0.86
VCAN-208ENST00000512590 CHCHD3Q9NX63 227 aaKnown RBP9.69□□□□□ -0.86
VCAN-208ENST00000512590 SH3BP1Q9Y3L3 701 aa9.69□□□□□ -0.86
VCAN-208ENST00000512590 ARHGAP42A6NI28 874 aa9.69□□□□□ -0.86
VCAN-208ENST00000512590 PYGMP11217 842 aa9.69□□□□□ -0.86
VCAN-208ENST00000512590 KSR2Q6VAB6 950 aa9.69□□□□□ -0.86
VCAN-208ENST00000512590 LCA5Q86VQ0 697 aa9.69□□□□□ -0.86
VCAN-208ENST00000512590 GIMAP4Q9NUV9 329 aa9.69□□□□□ -0.86
VCAN-208ENST00000512590 SPDYE5A6NIY4 337 aa9.68□□□□□ -0.86
VCAN-208ENST00000512590 AKT1P31749 480 aa9.68□□□□□ -0.86
VCAN-208ENST00000512590 OSTNP61366 133 aa9.68□□□□□ -0.86
VCAN-208ENST00000512590 DAB2P98082 770 aa9.68□□□□□ -0.86
VCAN-208ENST00000512590 PDE1BQ01064 536 aa9.68□□□□□ -0.86
VCAN-208ENST00000512590 SPDYE7PQ495Y7 208 aa9.68□□□□□ -0.86
VCAN-208ENST00000512590 TRIM31Q9BZY9 425 aa9.68□□□□□ -0.86
VCAN-208ENST00000512590 LRG1P02750 347 aa9.68□□□□□ -0.86
VCAN-208ENST00000512590 DARSP14868 501 aaKnown RBP9.68□□□□□ -0.86
VCAN-208ENST00000512590 AARS2Q5JTZ9 985 aaKnown RBP9.68□□□□□ -0.86
VCAN-208ENST00000512590 ANKRD20A3Q5VUR7 823 aa9.68□□□□□ -0.86
VCAN-208ENST00000512590 ARL8AQ96BM9 186 aa9.68□□□□□ -0.86
VCAN-208ENST00000512590 ATG3Q9NT62 314 aa9.68□□□□□ -0.86
VCAN-208ENST00000512590 FAM170AA1A519 330 aa9.68□□□□□ -0.86
VCAN-208ENST00000512590 TBC1D10BQ4KMP7 808 aaPredicted RBP9.68□□□□□ -0.86
VCAN-208ENST00000512590 TTC23Q5W5X9 447 aa9.68□□□□□ -0.86
VCAN-208ENST00000512590 TRIM67Q6ZTA4 783 aa9.68□□□□□ -0.86
VCAN-208ENST00000512590 CASS4Q9NQ75 786 aa9.68□□□□□ -0.86
VCAN-208ENST00000512590 ATAD2BQ9ULI0 1458 aa9.68□□□□□ -0.86
VCAN-208ENST00000512590 SCNN1BP51168 640 aa9.68□□□□□ -0.86
VCAN-208ENST00000512590 MCM6Q14566 821 aa9.68□□□□□ -0.86
VCAN-208ENST00000512590 RUFY3Q7L099 469 aa9.68□□□□□ -0.86
VCAN-208ENST00000512590 ZNF438Q7Z4V0 828 aa9.68□□□□□ -0.86
VCAN-208ENST00000512590 RGL4Q8IZJ4 473 aa9.68□□□□□ -0.86
VCAN-208ENST00000512590 BBOF1Q8ND07 529 aa9.68□□□□□ -0.86
VCAN-208ENST00000512590 SH3TC2Q8TF17 1288 aa9.68□□□□□ -0.86
VCAN-208ENST00000512590 GIPC2Q8TF65 315 aa9.68□□□□□ -0.86
VCAN-208ENST00000512590 DHX38Q92620 1227 aaKnown RBP9.68□□□□□ -0.86
VCAN-208ENST00000512590 MMP19Q99542 508 aa9.68□□□□□ -0.86
VCAN-208ENST00000512590 FAM129AQ9BZQ8 928 aa9.68□□□□□ -0.86
VCAN-208ENST00000512590 CAPN7Q9Y6W3 813 aa9.68□□□□□ -0.86
VCAN-208ENST00000512590 MED7O43513 233 aa9.67□□□□□ -0.86
VCAN-208ENST00000512590 TFAMQ00059 246 aaKnown RBP9.67□□□□□ -0.86
VCAN-208ENST00000512590 POSTNQ15063 836 aa9.67□□□□□ -0.86
VCAN-208ENST00000512590 E2F5Q15329 346 aa9.67□□□□□ -0.86
VCAN-208ENST00000512590 COLEC12Q5KU26 742 aa9.67□□□□□ -0.86
VCAN-208ENST00000512590 TEX2Q8IWB9 1127 aa9.67□□□□□ -0.86
VCAN-208ENST00000512590 SYCE1Q8N0S2 351 aa9.67□□□□□ -0.86
VCAN-208ENST00000512590 ARFGAP2Q8N6H7 521 aa9.67□□□□□ -0.86
VCAN-208ENST00000512590 NSUN7Q8NE18 718 aaKnown RBP9.67□□□□□ -0.86
VCAN-208ENST00000512590 ULK4Q96C45 1275 aa9.67□□□□□ -0.86
VCAN-208ENST00000512590 AHCYL2Q96HN2 611 aaKnown RBP9.67□□□□□ -0.86
VCAN-208ENST00000512590 SPATA16Q9BXB7 569 aa9.67□□□□□ -0.86
VCAN-208ENST00000512590 TRIM54Q9BYV2 358 aa9.67□□□□□ -0.86
VCAN-208ENST00000512590 PSTPIP2Q9H939 334 aa9.67□□□□□ -0.86
VCAN-208ENST00000512590 DBNDD1Q9H9R9 158 aa9.67□□□□□ -0.86
VCAN-208ENST00000512590 ZFYVE1Q9HBF4 777 aa9.67□□□□□ -0.86
VCAN-208ENST00000512590 HACL1Q9UJ83 578 aa9.67□□□□□ -0.86
VCAN-208ENST00000512590 ZSCAN9O15535 394 aaPredicted RBP9.67□□□□□ -0.86
VCAN-208ENST00000512590 RNASEH1O60930 286 aaKnown RBP9.67□□□□□ -0.86
VCAN-208ENST00000512590 ALDH1L1O75891 902 aa9.67□□□□□ -0.86
VCAN-208ENST00000512590 DNAJC8O75937 253 aaPredicted RBP9.67□□□□□ -0.86
VCAN-208ENST00000512590 HSPA6P17066 643 aa9.67□□□□□ -0.86
VCAN-208ENST00000512590 FAM160A1Q05DH4 1040 aa9.67□□□□□ -0.86
VCAN-208ENST00000512590 TOMM20Q15388 145 aa9.67□□□□□ -0.86
VCAN-208ENST00000512590 SLFN13Q68D06 897 aa9.67□□□□□ -0.86
VCAN-208ENST00000512590 SLFN12Q8IYM2 578 aa9.67□□□□□ -0.86
VCAN-208ENST00000512590 OR6B3Q8NGW1 331 aa9.67□□□□□ -0.86
VCAN-208ENST00000512590 MRPS27Q92552 414 aaKnown RBP9.67□□□□□ -0.86
VCAN-208ENST00000512590 LRRC37BQ96QE4 947 aa9.67□□□□□ -0.86
VCAN-208ENST00000512590 EIF2AQ9BY44 585 aaKnown RBP9.67□□□□□ -0.86
VCAN-208ENST00000512590 NT5C3AQ9H0P0 336 aa9.67□□□□□ -0.86
VCAN-208ENST00000512590 SARS2Q9NP81 518 aaKnown RBP9.67□□□□□ -0.86
VCAN-208ENST00000512590 SMARCA4P51532 1647 aa9.67□□□□□ -0.86
VCAN-208ENST00000512590 A0A1B0GVL5 298 aa9.67□□□□□ -0.86
VCAN-208ENST00000512590 E5RI56 91 aa9.67□□□□□ -0.86
VCAN-208ENST00000512590 H3BRJ5 948 aa9.67□□□□□ -0.86
VCAN-208ENST00000512590 MYL7Q01449 175 aa9.67□□□□□ -0.86
VCAN-208ENST00000512590 PKN3Q6P5Z2 889 aa9.67□□□□□ -0.86
VCAN-208ENST00000512590 TRIM59Q8IWR1 403 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms