RNA–Protein interactions for RNA: ENST00000512462.5

PRDM16-207, Transcript of PR/SET domain 16, humanhuman

TSL 1 (best)

Gene PRDM16, Length 3,723 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-207ENST00000512462 NPHP3-ACAD11A0A0J9YXS1 232 aa13.23□□□□□ -0.29
PRDM16-207ENST00000512462 PSDA5PKW4 1024 aaPredicted RBP13.23□□□□□ -0.29
PRDM16-207ENST00000512462 P2RX5Q93086 422 aa13.23□□□□□ -0.29
PRDM16-207ENST00000512462 MAP3K14Q99558 947 aa13.23□□□□□ -0.29
PRDM16-207ENST00000512462 LZTS2Q9BRK4 669 aa13.23□□□□□ -0.29
PRDM16-207ENST00000512462 KCNQ5Q9NR82 932 aa13.23□□□□□ -0.29
PRDM16-207ENST00000512462 POLLQ9UGP5 575 aa13.23□□□□□ -0.29
PRDM16-207ENST00000512462 AFDNP55196 1824 aaKnown RBP13.22□□□□□ -0.29
PRDM16-207ENST00000512462 ZEB2O60315 1214 aa13.22□□□□□ -0.29
PRDM16-207ENST00000512462 GAS7O60861 476 aa13.22□□□□□ -0.29
PRDM16-207ENST00000512462 EEF2P13639 858 aaKnown RBP13.22□□□□□ -0.29
PRDM16-207ENST00000512462 OAS2P29728 719 aaKnown RBP13.22□□□□□ -0.29
PRDM16-207ENST00000512462 CRKP46108 304 aa13.22□□□□□ -0.29
PRDM16-207ENST00000512462 KLK7P49862 253 aa13.22□□□□□ -0.29
PRDM16-207ENST00000512462 ADAM9Q13443 819 aa13.22□□□□□ -0.29
PRDM16-207ENST00000512462 CDC37Q16543 378 aaPredicted RBP13.22□□□□□ -0.29
PRDM16-207ENST00000512462 LRRC27Q9C0I9 530 aa13.22□□□□□ -0.29
PRDM16-207ENST00000512462 ARHGEF10LQ9HCE6 1279 aa13.22□□□□□ -0.29
PRDM16-207ENST00000512462 RSPH14Q9UHP6 348 aa13.22□□□□□ -0.29
PRDM16-207ENST00000512462 TACC3Q9Y6A5 838 aa13.22□□□□□ -0.29
PRDM16-207ENST00000512462 UBR2Q8IWV8 1755 aa13.22□□□□□ -0.29
PRDM16-207ENST00000512462 PRPF6O94906 941 aaKnown RBP13.22□□□□□ -0.29
PRDM16-207ENST00000512462 KRT13P13646 458 aa13.22□□□□□ -0.29
PRDM16-207ENST00000512462 CLCN6P51797 869 aa13.22□□□□□ -0.29
PRDM16-207ENST00000512462 CTTNQ14247 550 aaKnown RBP13.22□□□□□ -0.29
PRDM16-207ENST00000512462 TCP11X2Q5H9J9 407 aa13.22□□□□□ -0.29
PRDM16-207ENST00000512462 PCDHA6Q9UN73 950 aa13.22□□□□□ -0.29
PRDM16-207ENST00000512462 PCDHA8Q9Y5H6 950 aa13.22□□□□□ -0.29
PRDM16-207ENST00000512462 PDE4DIPQ5VU43 2346 aa13.22□□□□□ -0.29
PRDM16-207ENST00000512462 TTC26A0AVF1 554 aa13.22□□□□□ -0.29
PRDM16-207ENST00000512462 TLDC2A0PJX2 215 aa13.22□□□□□ -0.29
PRDM16-207ENST00000512462 POTEFA5A3E0 1075 aa13.22□□□□□ -0.29
PRDM16-207ENST00000512462 ARHGEF35A5YM69 484 aa13.22□□□□□ -0.29
PRDM16-207ENST00000512462 EXOC3O60645 756 aa13.22□□□□□ -0.29
PRDM16-207ENST00000512462 POTEIP0CG38 1075 aa13.22□□□□□ -0.29
PRDM16-207ENST00000512462 STK4Q13043 487 aa13.22□□□□□ -0.29
PRDM16-207ENST00000512462 MAP9Q49MG5 647 aa13.22□□□□□ -0.29
PRDM16-207ENST00000512462 POTEGQ6S5H5 508 aa13.22□□□□□ -0.29
PRDM16-207ENST00000512462 POTEEQ6S8J3 1075 aa13.22□□□□□ -0.29
PRDM16-207ENST00000512462 HOMEZQ8IX15 550 aa13.22□□□□□ -0.29
PRDM16-207ENST00000512462 LRRN4CLQ8ND94 238 aa13.22□□□□□ -0.29
PRDM16-207ENST00000512462 DDX12PQ92771 950 aa13.22□□□□□ -0.29
PRDM16-207ENST00000512462 CCDC127Q96BQ5 260 aa13.22□□□□□ -0.29
PRDM16-207ENST00000512462 SHANK3Q9BYB0 1731 aa13.21□□□□□ -0.29
PRDM16-207ENST00000512462 DNM2P50570 870 aa13.21□□□□□ -0.29
PRDM16-207ENST00000512462 ATP2C1P98194 919 aaPredicted RBP13.21□□□□□ -0.29
PRDM16-207ENST00000512462 IFFO1Q0D2I5 559 aa13.21□□□□□ -0.29
PRDM16-207ENST00000512462 SEC23AQ15436 765 aa13.21□□□□□ -0.29
PRDM16-207ENST00000512462 PKN1Q16512 942 aa13.21□□□□□ -0.29
PRDM16-207ENST00000512462 GSPT2Q8IYD1 628 aaKnown RBP13.21□□□□□ -0.29
PRDM16-207ENST00000512462 BHMT2Q9H2M3 363 aa13.21□□□□□ -0.29
PRDM16-207ENST00000512462 PCIF1Q9H4Z3 704 aa13.21□□□□□ -0.29
PRDM16-207ENST00000512462 GINS2Q9Y248 185 aa13.21□□□□□ -0.29
PRDM16-207ENST00000512462 WDR19Q8NEZ3 1342 aa13.21□□□□□ -0.29
PRDM16-207ENST00000512462 SALL1Q9NSC2 1324 aa13.21□□□□□ -0.29
PRDM16-207ENST00000512462 ACTN4O43707 911 aaKnown RBP13.21□□□□□ -0.29
PRDM16-207ENST00000512462 PCP11498 1178 aaKnown RBP13.21□□□□□ -0.29
PRDM16-207ENST00000512462 HAUS3Q68CZ6 603 aa13.21□□□□□ -0.29
PRDM16-207ENST00000512462 ADGRF4Q8IZF3 695 aa13.21□□□□□ -0.29
PRDM16-207ENST00000512462 ZNF277Q9NRM2 450 aaPredicted RBP13.21□□□□□ -0.29
PRDM16-207ENST00000512462 PCDHAC2Q9Y5I4 1007 aa13.21□□□□□ -0.29
PRDM16-207ENST00000512462 MFAP3LO75121 409 aa13.21□□□□□ -0.3
PRDM16-207ENST00000512462 TRAPPC10P48553 1259 aa13.21□□□□□ -0.3
PRDM16-207ENST00000512462 KCTD19Q17RG1 926 aaPredicted RBP13.21□□□□□ -0.3
PRDM16-207ENST00000512462 TTC19Q6DKK2 380 aaPredicted RBP13.21□□□□□ -0.3
PRDM16-207ENST00000512462 CCDC155Q8N6L0 562 aa13.21□□□□□ -0.3
PRDM16-207ENST00000512462 ZNF512BQ96KM6 892 aaPredicted RBP13.21□□□□□ -0.3
PRDM16-207ENST00000512462 OSBPL5Q9H0X9 879 aaPredicted RBP13.21□□□□□ -0.3
PRDM16-207ENST00000512462 BARHL2Q9NY43 387 aa13.21□□□□□ -0.3
PRDM16-207ENST00000512462 PAPPAQ13219 1627 aa13.21□□□□□ -0.3
PRDM16-207ENST00000512462 KCPQ6ZWJ8 1503 aa13.2□□□□□ -0.3
PRDM16-207ENST00000512462 LRRN2O75325 713 aa13.2□□□□□ -0.3
PRDM16-207ENST00000512462 NR2F2P24468 414 aa13.2□□□□□ -0.3
PRDM16-207ENST00000512462 PRAMEF18Q5VWM3 479 aa13.2□□□□□ -0.3
PRDM16-207ENST00000512462 SAR1BQ9Y6B6 198 aa13.2□□□□□ -0.3
PRDM16-207ENST00000512462 CEP104O60308 925 aa13.2□□□□□ -0.3
PRDM16-207ENST00000512462 GUCY2FP51841 1108 aa13.2□□□□□ -0.3
PRDM16-207ENST00000512462 GRM1Q13255 1194 aa13.2□□□□□ -0.3
PRDM16-207ENST00000512462 NCAPHQ15003 741 aa13.2□□□□□ -0.3
PRDM16-207ENST00000512462 QRICH1Q2TAL8 776 aa13.2□□□□□ -0.3
PRDM16-207ENST00000512462 ZNF710Q8N1W2 664 aa13.2□□□□□ -0.3
PRDM16-207ENST00000512462 EHBP1Q8NDI1 1231 aa13.2□□□□□ -0.3
PRDM16-207ENST00000512462 TUBE1Q9UJT0 475 aa13.2□□□□□ -0.3
PRDM16-207ENST00000512462 SLC7A5Q01650 507 aa13.2□□□□□ -0.3
PRDM16-207ENST00000512462 EN1Q05925 392 aaPredicted RBP13.2□□□□□ -0.3
PRDM16-207ENST00000512462 GRM4Q14833 912 aa13.2□□□□□ -0.3
PRDM16-207ENST00000512462 SND1Q7KZF4 910 aaKnown RBP eCLIP13.2□□□□□ -0.3
PRDM16-207ENST00000512462 TMC4Q7Z404 712 aa13.2□□□□□ -0.3
PRDM16-207ENST00000512462 CCDC25Q86WR0 208 aa13.2□□□□□ -0.3
PRDM16-207ENST00000512462 AMNQ9BXJ7 453 aa13.2□□□□□ -0.3
PRDM16-207ENST00000512462 ZNF408Q9H9D4 720 aa13.2□□□□□ -0.3
PRDM16-207ENST00000512462 AGPAT5Q9NUQ2 364 aa13.2□□□□□ -0.3
PRDM16-207ENST00000512462 MYO6Q9UM54 1294 aa13.2□□□□□ -0.3
PRDM16-207ENST00000512462 ORC4O43929 436 aa13.19□□□□□ -0.3
PRDM16-207ENST00000512462 ZBTB7AO95365 584 aa13.19□□□□□ -0.3
PRDM16-207ENST00000512462 FTCDO95954 541 aa13.19□□□□□ -0.3
PRDM16-207ENST00000512462 CETN1Q12798 172 aa13.19□□□□□ -0.3
PRDM16-207ENST00000512462 SLC9C1Q4G0N8 1177 aa13.19□□□□□ -0.3
PRDM16-207ENST00000512462 RAD9BQ6WBX8 426 aa13.19□□□□□ -0.3
PRDM16-207ENST00000512462 EP400NLQ6ZTU2 488 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms