RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 E2F4Q16254 413 aa17.18■□□□□ 0.34
SCLT1-209ENST00000511426 SH3RF1Q7Z6J0 888 aa17.18■□□□□ 0.34
SCLT1-209ENST00000511426 REPS2Q8NFH8 660 aa17.18■□□□□ 0.34
SCLT1-209ENST00000511426 DISC1Q9NRI5 854 aa17.18■□□□□ 0.34
SCLT1-209ENST00000511426 FZD1Q9UP38 647 aa17.18■□□□□ 0.34
SCLT1-209ENST00000511426 SMC2O95347 1197 aa17.17■□□□□ 0.34
SCLT1-209ENST00000511426 MDM2Q00987 491 aaPredicted RBP17.17■□□□□ 0.34
SCLT1-209ENST00000511426 SETQ01105 290 aaPredicted RBP17.17■□□□□ 0.34
SCLT1-209ENST00000511426 PABPC4Q13310 644 aaKnown RBP eCLIP17.17■□□□□ 0.34
SCLT1-209ENST00000511426 TTLL12Q14166 644 aaPredicted RBP17.17■□□□□ 0.34
SCLT1-209ENST00000511426 LBX2Q6XYB7 198 aa17.17■□□□□ 0.34
SCLT1-209ENST00000511426 USP49Q70CQ1 688 aa17.17■□□□□ 0.34
SCLT1-209ENST00000511426 FASTKD5Q7L8L6 764 aaKnown RBP17.17■□□□□ 0.34
SCLT1-209ENST00000511426 KCTD17Q8N5Z5 321 aa17.17■□□□□ 0.34
SCLT1-209ENST00000511426 CLEC4DQ8WXI8 215 aa17.17■□□□□ 0.34
SCLT1-209ENST00000511426 ATG4CQ96DT6 458 aa17.17■□□□□ 0.34
SCLT1-209ENST00000511426 AGBL1Q96MI9 1066 aa17.17■□□□□ 0.34
SCLT1-209ENST00000511426 BPIFA3Q9BQP9 254 aa17.17■□□□□ 0.34
SCLT1-209ENST00000511426 TEX13BQ9BXU2 312 aa17.17■□□□□ 0.34
SCLT1-209ENST00000511426 SERTAD1Q9UHV2 236 aa17.17■□□□□ 0.34
SCLT1-209ENST00000511426 FRMPD4Q14CM0 1322 aa17.17■□□□□ 0.34
SCLT1-209ENST00000511426 CT47A1Q5JQC4 288 aaPredicted RBP17.16■□□□□ 0.34
SCLT1-209ENST00000511426 SPATA20Q8TB22 786 aa17.16■□□□□ 0.34
SCLT1-209ENST00000511426 DHX58Q96C10 678 aa17.16■□□□□ 0.34
SCLT1-209ENST00000511426 CLEC11AQ9Y240 323 aa17.16■□□□□ 0.34
SCLT1-209ENST00000511426 RBBP6Q7Z6E9 1792 aaKnown RBP17.16■□□□□ 0.34
SCLT1-209ENST00000511426 MARCH6O60337 910 aa17.16■□□□□ 0.34
SCLT1-209ENST00000511426 STAT6P42226 847 aa17.16■□□□□ 0.34
SCLT1-209ENST00000511426 NLRP12P59046 1061 aa17.16■□□□□ 0.34
SCLT1-209ENST00000511426 ANO6Q4KMQ2 910 aa17.16■□□□□ 0.34
SCLT1-209ENST00000511426 XRRA1Q6P2D8 792 aa17.16■□□□□ 0.34
SCLT1-209ENST00000511426 NIPA1Q7RTP0 329 aa17.16■□□□□ 0.34
SCLT1-209ENST00000511426 CABP7Q86V35 215 aa17.16■□□□□ 0.34
SCLT1-209ENST00000511426 PDILTQ8N807 584 aa17.16■□□□□ 0.34
SCLT1-209ENST00000511426 CALML4Q96GE6 196 aa17.16■□□□□ 0.34
SCLT1-209ENST00000511426 TTC12Q9H892 705 aaPredicted RBP17.16■□□□□ 0.34
SCLT1-209ENST00000511426 RAVER2Q9HCJ3 691 aaKnown RBP17.16■□□□□ 0.34
SCLT1-209ENST00000511426 STK17AQ9UEE5 414 aa17.16■□□□□ 0.34
SCLT1-209ENST00000511426 ZNF214Q9UL59 606 aaPredicted RBP17.16■□□□□ 0.34
SCLT1-209ENST00000511426 PCDHA12Q9UN75 941 aa17.16■□□□□ 0.34
SCLT1-209ENST00000511426 RPTORQ8N122 1335 aa17.15■□□□□ 0.34
SCLT1-209ENST00000511426 KDM3AQ9Y4C1 1321 aa17.15■□□□□ 0.34
SCLT1-209ENST00000511426 SPDYE16A6NNV3 312 aaPredicted RBP17.15■□□□□ 0.34
SCLT1-209ENST00000511426 IRF6O14896 467 aa17.15■□□□□ 0.34
SCLT1-209ENST00000511426 ALAS1P13196 640 aa17.15■□□□□ 0.34
SCLT1-209ENST00000511426 HOXA13P31271 388 aaPredicted RBP17.15■□□□□ 0.34
SCLT1-209ENST00000511426 TXKP42681 527 aa17.15■□□□□ 0.34
SCLT1-209ENST00000511426 ZNF165P49910 485 aa17.15■□□□□ 0.34
SCLT1-209ENST00000511426 DGKZQ13574 1117 aa17.15■□□□□ 0.34
SCLT1-209ENST00000511426 RRAGBQ5VZM2 374 aa17.15■□□□□ 0.34
SCLT1-209ENST00000511426 CPXCR1Q8N123 301 aa17.15■□□□□ 0.34
SCLT1-209ENST00000511426 SMARCE1Q969G3 411 aa17.15■□□□□ 0.34
SCLT1-209ENST00000511426 GSDMAQ96QA5 445 aa17.15■□□□□ 0.34
SCLT1-209ENST00000511426 GTPBP4Q9BZE4 634 aaKnown RBP17.15■□□□□ 0.34
SCLT1-209ENST00000511426 ELP3Q9H9T3 547 aa17.15■□□□□ 0.34
SCLT1-209ENST00000511426 LRWD1Q9UFC0 647 aa17.15■□□□□ 0.34
SCLT1-209ENST00000511426 DACH1Q9UI36 760 aa17.15■□□□□ 0.34
SCLT1-209ENST00000511426 RLFQ13129 1914 aa17.15■□□□□ 0.34
SCLT1-209ENST00000511426 A0A087X0B3 334 aa17.14■□□□□ 0.33
SCLT1-209ENST00000511426 BCRP11274 1271 aa17.14■□□□□ 0.33
SCLT1-209ENST00000511426 COPB2P35606 906 aa17.14■□□□□ 0.33
SCLT1-209ENST00000511426 ZNF76P36508 570 aa17.14■□□□□ 0.33
SCLT1-209ENST00000511426 TECP42680 631 aa17.14■□□□□ 0.33
SCLT1-209ENST00000511426 SARSP49591 514 aaKnown RBP17.14■□□□□ 0.33
SCLT1-209ENST00000511426 KRT79Q5XKE5 535 aa17.14■□□□□ 0.33
SCLT1-209ENST00000511426 PDXDC2PQ6P474 469 aa17.14■□□□□ 0.33
SCLT1-209ENST00000511426 SAMD1Q6SPF0 538 aaPredicted RBP17.14■□□□□ 0.33
SCLT1-209ENST00000511426 FCHSD1Q86WN1 690 aa17.14■□□□□ 0.33
SCLT1-209ENST00000511426 RASSF8Q8NHQ8 419 aa17.14■□□□□ 0.33
SCLT1-209ENST00000511426 ETNPPLQ8TBG4 499 aa17.14■□□□□ 0.33
SCLT1-209ENST00000511426 GTF3C2Q8WUA4 911 aaPredicted RBP17.14■□□□□ 0.33
SCLT1-209ENST00000511426 HAS1Q92839 578 aa17.14■□□□□ 0.33
SCLT1-209ENST00000511426 OTUD5Q96G74 571 aa17.14■□□□□ 0.33
SCLT1-209ENST00000511426 TRERF1Q96PN7 1200 aa17.14■□□□□ 0.33
SCLT1-209ENST00000511426 P2RX7Q99572 595 aaKnown RBP17.14■□□□□ 0.33
SCLT1-209ENST00000511426 AGTPBP1Q9UPW5 1226 aa17.14■□□□□ 0.33
SCLT1-209ENST00000511426 MYH7BA7E2Y1 1941 aa17.14■□□□□ 0.33
SCLT1-209ENST00000511426 PTPRFP10586 1907 aa17.14■□□□□ 0.33
SCLT1-209ENST00000511426 A0A0G2JMZ2 1700 aa17.14■□□□□ 0.33
SCLT1-209ENST00000511426 HAUS3Q68CZ6 603 aa17.13■□□□□ 0.33
SCLT1-209ENST00000511426 RNF214Q8ND24 703 aa17.13■□□□□ 0.33
SCLT1-209ENST00000511426 CHST13Q8NET6 341 aa17.13■□□□□ 0.33
SCLT1-209ENST00000511426 LENG9Q96B70 501 aa17.13■□□□□ 0.33
SCLT1-209ENST00000511426 PAGE5Q96GU1 130 aa17.13■□□□□ 0.33
SCLT1-209ENST00000511426 NT5C3AQ9H0P0 336 aa17.13■□□□□ 0.33
SCLT1-209ENST00000511426 FBXO40Q9UH90 709 aa17.13■□□□□ 0.33
SCLT1-209ENST00000511426 PCDHA5Q9Y5H7 936 aa17.13■□□□□ 0.33
SCLT1-209ENST00000511426 NFIBO00712 420 aa17.13■□□□□ 0.33
SCLT1-209ENST00000511426 GTPBP6O43824 516 aaPredicted RBP17.13■□□□□ 0.33
SCLT1-209ENST00000511426 AMPD3Q01432 767 aa17.13■□□□□ 0.33
SCLT1-209ENST00000511426 SNAPC2Q13487 334 aa17.13■□□□□ 0.33
SCLT1-209ENST00000511426 PNOCQ13519 176 aa17.13■□□□□ 0.33
SCLT1-209ENST00000511426 CEP55Q53EZ4 464 aa17.13■□□□□ 0.33
SCLT1-209ENST00000511426 PRR16Q569H4 304 aa17.13■□□□□ 0.33
SCLT1-209ENST00000511426 HYIQ5T013 277 aa17.13■□□□□ 0.33
SCLT1-209ENST00000511426 SNRNP48Q6IEG0 339 aaKnown RBP17.13■□□□□ 0.33
SCLT1-209ENST00000511426 OPTNQ96CV9 577 aa17.13■□□□□ 0.33
SCLT1-209ENST00000511426 LRRC27Q9C0I9 530 aa17.13■□□□□ 0.33
SCLT1-209ENST00000511426 RNF146Q9NTX7 359 aa17.13■□□□□ 0.33
SCLT1-209ENST00000511426 RMND1Q9NWS8 449 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms