RNA–Protein interactions for RNA: ENST00000511001.2

CHFR-208, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 892 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-208ENST00000511001 RAG1P15918 1043 aa14.01□□□□□ -0.17
CHFR-208ENST00000511001 HSD17B4P51659 736 aa14.01□□□□□ -0.17
CHFR-208ENST00000511001 SART3Q15020 963 aaKnown RBP14.01□□□□□ -0.17
CHFR-208ENST00000511001 CREB3L3Q68CJ9 461 aa14.01□□□□□ -0.17
CHFR-208ENST00000511001 MCF2L2Q86YR7 1114 aa14.01□□□□□ -0.17
CHFR-208ENST00000511001 SCFD2Q8WU76 684 aa14.01□□□□□ -0.17
CHFR-208ENST00000511001 PIGSQ96S52 555 aa14.01□□□□□ -0.17
CHFR-208ENST00000511001 MTA3Q9BTC8 594 aa14.01□□□□□ -0.17
CHFR-208ENST00000511001 STXBP5LQ9Y2K9 1186 aa14.01□□□□□ -0.17
CHFR-208ENST00000511001 TRIP12Q14669 1992 aaPredicted RBP14□□□□□ -0.17
CHFR-208ENST00000511001 ZEB2O60315 1214 aa14□□□□□ -0.17
CHFR-208ENST00000511001 TIMP1P01033 207 aa14□□□□□ -0.17
CHFR-208ENST00000511001 ITGA7Q13683 1181 aa14□□□□□ -0.17
CHFR-208ENST00000511001 PPP2R5BQ15173 497 aa14□□□□□ -0.17
CHFR-208ENST00000511001 CCDC62Q6P9F0 684 aa14□□□□□ -0.17
CHFR-208ENST00000511001 HOMER1Q86YM7 354 aa14□□□□□ -0.17
CHFR-208ENST00000511001 OR6J1Q8NGC5 347 aa14□□□□□ -0.17
CHFR-208ENST00000511001 NSUN6Q8TEA1 469 aaKnown RBP14□□□□□ -0.17
CHFR-208ENST00000511001 MPHOSPH6Q99547 160 aaKnown RBP14□□□□□ -0.17
CHFR-208ENST00000511001 ANO2Q9NQ90 1003 aa14□□□□□ -0.17
CHFR-208ENST00000511001 PCDHA1Q9Y5I3 950 aa14□□□□□ -0.17
CHFR-208ENST00000511001 GTF3C3Q9Y5Q9 886 aa14□□□□□ -0.17
CHFR-208ENST00000511001 DOCK5Q9H7D0 1870 aa13.99□□□□□ -0.17
CHFR-208ENST00000511001 SCN5AQ14524 2016 aa13.99□□□□□ -0.17
CHFR-208ENST00000511001 B4DLN1 442 aa13.99□□□□□ -0.17
CHFR-208ENST00000511001 SH2B2O14492 632 aaPredicted RBP13.99□□□□□ -0.17
CHFR-208ENST00000511001 NKRFO15226 690 aaKnown RBP eCLIP13.99□□□□□ -0.17
CHFR-208ENST00000511001 PRC1O43663 620 aa13.99□□□□□ -0.17
CHFR-208ENST00000511001 CFBP00751 764 aa13.99□□□□□ -0.17
CHFR-208ENST00000511001 MRPL12P52815 198 aaKnown RBP13.99□□□□□ -0.17
CHFR-208ENST00000511001 PSMC6P62333 389 aa13.99□□□□□ -0.17
CHFR-208ENST00000511001 PURAQ00577 322 aaKnown RBP13.99□□□□□ -0.17
CHFR-208ENST00000511001 CATIPQ7Z7H3 387 aa13.99□□□□□ -0.17
CHFR-208ENST00000511001 ZNF654Q8IZM8 581 aa13.99□□□□□ -0.17
CHFR-208ENST00000511001 IWS1Q96ST2 819 aa13.99□□□□□ -0.17
CHFR-208ENST00000511001 RMDN3Q96TC7 470 aa13.99□□□□□ -0.17
CHFR-208ENST00000511001 MAP3K14Q99558 947 aa13.99□□□□□ -0.17
CHFR-208ENST00000511001 MYL10Q9BUA6 226 aa13.99□□□□□ -0.17
CHFR-208ENST00000511001 PXMP2Q9NR77 195 aa13.99□□□□□ -0.17
CHFR-208ENST00000511001 MTMR10Q9NXD2 777 aa13.99□□□□□ -0.17
CHFR-208ENST00000511001 LAMA2P24043 3122 aaKnown RBP13.98□□□□□ -0.17
CHFR-208ENST00000511001 A6NJR5 290 aa13.98□□□□□ -0.17
CHFR-208ENST00000511001 TLR3O15455 904 aaKnown RBP13.98□□□□□ -0.17
CHFR-208ENST00000511001 DDAH1O94760 285 aa13.98□□□□□ -0.17
CHFR-208ENST00000511001 TXNP10599 105 aaKnown RBP13.98□□□□□ -0.17
CHFR-208ENST00000511001 EIF2AK2P19525 551 aaKnown RBP13.98□□□□□ -0.17
CHFR-208ENST00000511001 MCM5P33992 734 aa13.98□□□□□ -0.17
CHFR-208ENST00000511001 FPGSQ05932 587 aa13.98□□□□□ -0.17
CHFR-208ENST00000511001 MFSD5Q6N075 450 aa13.98□□□□□ -0.17
CHFR-208ENST00000511001 CASC1Q6TDU7 716 aa13.98□□□□□ -0.17
CHFR-208ENST00000511001 SAMD3Q8N6K7 520 aa13.98□□□□□ -0.17
CHFR-208ENST00000511001 TMEM87BQ96K49 555 aa13.98□□□□□ -0.17
CHFR-208ENST00000511001 COL25A1Q9BXS0 654 aaPredicted RBP13.98□□□□□ -0.17
CHFR-208ENST00000511001 POLR3EQ9NVU0 708 aa13.98□□□□□ -0.17
CHFR-208ENST00000511001 GBF1Q92538 1859 aa13.97□□□□□ -0.17
CHFR-208ENST00000511001 PNMA6FA0A0J9YX94 578 aa13.97□□□□□ -0.17
CHFR-208ENST00000511001 B4GALT4O60513 344 aa13.97□□□□□ -0.17
CHFR-208ENST00000511001 NR3C2P08235 984 aa13.97□□□□□ -0.17
CHFR-208ENST00000511001 MYL3P08590 195 aa13.97□□□□□ -0.17
CHFR-208ENST00000511001 HOXA13P31271 388 aaPredicted RBP13.97□□□□□ -0.17
CHFR-208ENST00000511001 LIFRP42702 1097 aa13.97□□□□□ -0.17
CHFR-208ENST00000511001 CPT1AP50416 773 aa13.97□□□□□ -0.17
CHFR-208ENST00000511001 ARHGAP1Q07960 439 aa13.97□□□□□ -0.17
CHFR-208ENST00000511001 TTLL4Q14679 1199 aa13.97□□□□□ -0.17
CHFR-208ENST00000511001 STXBP2Q15833 593 aa13.97□□□□□ -0.17
CHFR-208ENST00000511001 LY6KQ17RY6 165 aa13.97□□□□□ -0.17
CHFR-208ENST00000511001 ARHGEF16Q5VV41 709 aa13.97□□□□□ -0.17
CHFR-208ENST00000511001 SEPT14Q6ZU15 432 aa13.97□□□□□ -0.17
CHFR-208ENST00000511001 IL31RAQ8NI17 732 aa13.97□□□□□ -0.17
CHFR-208ENST00000511001 PDCD2LQ9BRP1 358 aa13.97□□□□□ -0.17
CHFR-208ENST00000511001 SPZ1Q9BXG8 430 aa13.97□□□□□ -0.17
CHFR-208ENST00000511001 SEZ6LQ9BYH1 1024 aa13.97□□□□□ -0.17
CHFR-208ENST00000511001 LRRC2Q9BYS8 371 aa13.97□□□□□ -0.17
CHFR-208ENST00000511001 PPP1R12CQ9BZL4 782 aa13.97□□□□□ -0.17
CHFR-208ENST00000511001 TRPV6Q9H1D0 765 aa13.97□□□□□ -0.17
CHFR-208ENST00000511001 MAP3K20Q9NYL2 800 aaKnown RBP13.97□□□□□ -0.17
CHFR-208ENST00000511001 VCANP13611 3396 aa13.97□□□□□ -0.17
CHFR-208ENST00000511001 UMODL1Q5DID0 1318 aa13.96□□□□□ -0.17
CHFR-208ENST00000511001 TET1Q8NFU7 2136 aa13.96□□□□□ -0.17
CHFR-208ENST00000511001 CDC45O75419 566 aa13.96□□□□□ -0.17
CHFR-208ENST00000511001 RGS20O76081 388 aa13.96□□□□□ -0.17
CHFR-208ENST00000511001 PLEKHA8P1O95397 391 aa13.96□□□□□ -0.17
CHFR-208ENST00000511001 C16orf59Q7L2K0 433 aa13.96□□□□□ -0.17
CHFR-208ENST00000511001 RASEFQ8IZ41 740 aa13.96□□□□□ -0.17
CHFR-208ENST00000511001 SRBD1Q8N5C6 995 aaKnown RBP13.96□□□□□ -0.17
CHFR-208ENST00000511001 MTG1Q9BT17 334 aaPredicted RBP13.96□□□□□ -0.17
CHFR-208ENST00000511001 ALDH8A1Q9H2A2 487 aaPredicted RBP13.96□□□□□ -0.17
CHFR-208ENST00000511001 DDX41Q9UJV9 622 aaKnown RBP13.96□□□□□ -0.17
CHFR-208ENST00000511001 TANC1Q9C0D5 1861 aa13.95□□□□□ -0.18
CHFR-208ENST00000511001 MYO9BQ13459 2157 aa13.95□□□□□ -0.18
CHFR-208ENST00000511001 EIF3JO75822 258 aaKnown RBP13.95□□□□□ -0.18
CHFR-208ENST00000511001 CSF2RAP15509 400 aa13.95□□□□□ -0.18
CHFR-208ENST00000511001 RXRAP19793 462 aa13.95□□□□□ -0.18
CHFR-208ENST00000511001 SMARCA1P28370 1054 aa13.95□□□□□ -0.18
CHFR-208ENST00000511001 CYP2C18P33260 490 aa13.95□□□□□ -0.18
CHFR-208ENST00000511001 TRAF1Q13077 416 aa13.95□□□□□ -0.18
CHFR-208ENST00000511001 PGM5Q15124 567 aa13.95□□□□□ -0.18
CHFR-208ENST00000511001 TMEM240Q5SV17 173 aa13.95□□□□□ -0.18
CHFR-208ENST00000511001 FAM109BQ6ICB4 259 aaPredicted RBP13.95□□□□□ -0.18
CHFR-208ENST00000511001 SGMS1Q86VZ5 419 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms