RNA–Protein interactions for RNA: ENST00000510852.1

USP53-207, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 2

Gene USP53, Length 2,437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-207ENST00000510852 ZNF654Q8IZM8 581 aa10.89□□□□□ -0.67
USP53-207ENST00000510852 MGARPQ8TDB4 240 aa10.89□□□□□ -0.67
USP53-207ENST00000510852 ASIC4Q96FT7 647 aa10.89□□□□□ -0.67
USP53-207ENST00000510852 MMTAG2Q9BU76 263 aaKnown RBP10.89□□□□□ -0.67
USP53-207ENST00000510852 RTFDC1Q9BY42 306 aaPredicted RBP10.89□□□□□ -0.67
USP53-207ENST00000510852 ZCCHC17Q9NP64 241 aaKnown RBP10.89□□□□□ -0.67
USP53-207ENST00000510852 GGA1Q9UJY5 639 aa10.89□□□□□ -0.67
USP53-207ENST00000510852 C21orf2O43822 256 aa10.89□□□□□ -0.67
USP53-207ENST00000510852 UFL1O94874 794 aa10.89□□□□□ -0.67
USP53-207ENST00000510852 MTHFD1P11586 935 aaKnown RBP10.89□□□□□ -0.67
USP53-207ENST00000510852 SDSP20132 328 aa10.89□□□□□ -0.67
USP53-207ENST00000510852 KLRK1P26718 216 aa10.89□□□□□ -0.67
USP53-207ENST00000510852 PHKA1P46020 1223 aa10.89□□□□□ -0.67
USP53-207ENST00000510852 BCAMP50895 628 aa10.89□□□□□ -0.67
USP53-207ENST00000510852 CCDC102BQ68D86 513 aa10.89□□□□□ -0.67
USP53-207ENST00000510852 C7orf43Q8WVR3 580 aa10.89□□□□□ -0.67
USP53-207ENST00000510852 ZNF75CPQ92670 426 aaPredicted RBP10.89□□□□□ -0.67
USP53-207ENST00000510852 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.89□□□□□ -0.67
USP53-207ENST00000510852 TMCO5BA8MYB1 307 aa10.88□□□□□ -0.67
USP53-207ENST00000510852 RTCAO00442 366 aaKnown RBP10.88□□□□□ -0.67
USP53-207ENST00000510852 KRT38O76015 456 aa10.88□□□□□ -0.67
USP53-207ENST00000510852 SLC4A1P02730 911 aa10.88□□□□□ -0.67
USP53-207ENST00000510852 LDHBP07195 334 aaKnown RBP10.88□□□□□ -0.67
USP53-207ENST00000510852 PTGDRQ13258 359 aa10.88□□□□□ -0.67
USP53-207ENST00000510852 SQSTM1Q13501 440 aa10.88□□□□□ -0.67
USP53-207ENST00000510852 FAM180BQ6P0A1 224 aa10.88□□□□□ -0.67
USP53-207ENST00000510852 TBC1D16Q8TBP0 767 aa10.88□□□□□ -0.67
USP53-207ENST00000510852 ANKRD49Q8WVL7 239 aa10.88□□□□□ -0.67
USP53-207ENST00000510852 CSRNP2Q9H175 543 aa10.88□□□□□ -0.67
USP53-207ENST00000510852 TSPYL2Q9H2G4 693 aaPredicted RBP10.88□□□□□ -0.67
USP53-207ENST00000510852 FANCFQ9NPI8 374 aa10.88□□□□□ -0.67
USP53-207ENST00000510852 PIM2Q9P1W9 311 aa10.88□□□□□ -0.67
USP53-207ENST00000510852 POLLQ9UGP5 575 aa10.88□□□□□ -0.67
USP53-207ENST00000510852 GTF2IRD1Q9UHL9 959 aa10.88□□□□□ -0.67
USP53-207ENST00000510852 KATNA1O75449 491 aa10.88□□□□□ -0.67
USP53-207ENST00000510852 IL33O95760 270 aa10.88□□□□□ -0.67
USP53-207ENST00000510852 GYG1P46976 350 aa10.88□□□□□ -0.67
USP53-207ENST00000510852 GJA8P48165 433 aa10.88□□□□□ -0.67
USP53-207ENST00000510852 NLRP12P59046 1061 aa10.88□□□□□ -0.67
USP53-207ENST00000510852 GABREP78334 506 aa10.88□□□□□ -0.67
USP53-207ENST00000510852 MLC1Q15049 377 aa10.88□□□□□ -0.67
USP53-207ENST00000510852 MAP7D1Q3KQU3 841 aa10.88□□□□□ -0.67
USP53-207ENST00000510852 C10orf76Q5T2E6 689 aa10.88□□□□□ -0.67
USP53-207ENST00000510852 GALNT5Q7Z7M9 940 aa10.88□□□□□ -0.67
USP53-207ENST00000510852 HOMER1Q86YM7 354 aa10.88□□□□□ -0.67
USP53-207ENST00000510852 RASEFQ8IZ41 740 aa10.88□□□□□ -0.67
USP53-207ENST00000510852 FAM84BQ96KN1 310 aaPredicted RBP10.88□□□□□ -0.67
USP53-207ENST00000510852 ASPSCR1Q9BZE9 553 aa10.88□□□□□ -0.67
USP53-207ENST00000510852 IRS2Q9Y4H2 1338 aa10.88□□□□□ -0.67
USP53-207ENST00000510852 A0A1B0GUL6 1792 aa10.88□□□□□ -0.67
USP53-207ENST00000510852 LRRC37AA6NMS7 1700 aa10.87□□□□□ -0.67
USP53-207ENST00000510852 ZSCAN20P17040 1043 aaPredicted RBP10.87□□□□□ -0.67
USP53-207ENST00000510852 SCARF1Q14162 830 aa10.87□□□□□ -0.67
USP53-207ENST00000510852 CAVIN4Q5BKX8 364 aa10.87□□□□□ -0.67
USP53-207ENST00000510852 FAM117BQ6P1L5 589 aa10.87□□□□□ -0.67
USP53-207ENST00000510852 DPP8Q6V1X1 898 aaPredicted RBP10.87□□□□□ -0.67
USP53-207ENST00000510852 SAPCD2Q86UD0 394 aa10.87□□□□□ -0.67
USP53-207ENST00000510852 TXNRD3Q86VQ6 643 aa10.87□□□□□ -0.67
USP53-207ENST00000510852 OR8H1Q8NGG4 311 aa10.87□□□□□ -0.67
USP53-207ENST00000510852 C1orf74Q96LT6 269 aa10.87□□□□□ -0.67
USP53-207ENST00000510852 UIMC1Q96RL1 719 aa10.87□□□□□ -0.67
USP53-207ENST00000510852 NOL10Q9BSC4 688 aaKnown RBP10.87□□□□□ -0.67
USP53-207ENST00000510852 CLIP2Q9UDT6 1046 aa10.87□□□□□ -0.67
USP53-207ENST00000510852 SLX4Q8IY92 1834 aa10.87□□□□□ -0.67
USP53-207ENST00000510852 SYNDIG1LA6NDD5 238 aa10.87□□□□□ -0.67
USP53-207ENST00000510852 TSPY2A6NKD2 308 aa10.87□□□□□ -0.67
USP53-207ENST00000510852 FAM196BA6NMK8 535 aa10.87□□□□□ -0.67
USP53-207ENST00000510852 C6orf229H3BNL8 230 aa10.87□□□□□ -0.67
USP53-207ENST00000510852 UQCRFS1P1P0C7P4 283 aa10.87□□□□□ -0.67
USP53-207ENST00000510852 TSPY3P0CV98 308 aa10.87□□□□□ -0.67
USP53-207ENST00000510852 TSPY8P0CW00 308 aa10.87□□□□□ -0.67
USP53-207ENST00000510852 TSPY1Q01534 308 aa10.87□□□□□ -0.67
USP53-207ENST00000510852 CHAF1AQ13111 956 aaPredicted RBP10.87□□□□□ -0.67
USP53-207ENST00000510852 ZSCAN26Q16670 478 aa10.87□□□□□ -0.67
USP53-207ENST00000510852 MTERF4Q7Z6M4 381 aaKnown RBP10.87□□□□□ -0.67
USP53-207ENST00000510852 NLGN2Q8NFZ4 835 aa10.87□□□□□ -0.67
USP53-207ENST00000510852 RILPL2Q969X0 211 aa10.87□□□□□ -0.67
USP53-207ENST00000510852 CEP95Q96GE4 821 aa10.87□□□□□ -0.67
USP53-207ENST00000510852 DNAJC7Q99615 494 aa10.87□□□□□ -0.67
USP53-207ENST00000510852 IRAK4Q9NWZ3 460 aa10.87□□□□□ -0.67
USP53-207ENST00000510852 DGKBQ9Y6T7 804 aa10.87□□□□□ -0.67
USP53-207ENST00000510852 KIAA1551Q9HCM1 1747 aa10.87□□□□□ -0.67
USP53-207ENST00000510852 DLEC1Q9Y238 1755 aa10.87□□□□□ -0.67
USP53-207ENST00000510852 H0YHG0 523 aa10.86□□□□□ -0.67
USP53-207ENST00000510852 MUSKO15146 869 aa10.86□□□□□ -0.67
USP53-207ENST00000510852 E2F6O75461 281 aa10.86□□□□□ -0.67
USP53-207ENST00000510852 RASGRP1O95267 797 aa10.86□□□□□ -0.67
USP53-207ENST00000510852 HIBADHP31937 336 aaKnown RBP10.86□□□□□ -0.67
USP53-207ENST00000510852 MCAMP43121 646 aa10.86□□□□□ -0.67
USP53-207ENST00000510852 SARNPP82979 210 aaKnown RBP10.86□□□□□ -0.67
USP53-207ENST00000510852 C15orf52Q6ZUT6 534 aaKnown RBP10.86□□□□□ -0.67
USP53-207ENST00000510852 SNCAIPQ9Y6H5 919 aa10.86□□□□□ -0.67
USP53-207ENST00000510852 ARAP2Q8WZ64 1704 aa10.86□□□□□ -0.67
USP53-207ENST00000510852 MOXD2PA6NHM9 499 aa10.86□□□□□ -0.67
USP53-207ENST00000510852 C2orf81A6NN90 581 aa10.86□□□□□ -0.67
USP53-207ENST00000510852 B3GALNT1O75752 331 aa10.86□□□□□ -0.67
USP53-207ENST00000510852 PRPF4BQ13523 1007 aaKnown RBP10.86□□□□□ -0.67
USP53-207ENST00000510852 PI16Q6UXB8 463 aa10.86□□□□□ -0.67
USP53-207ENST00000510852 CNTROBQ8N137 903 aa10.86□□□□□ -0.67
USP53-207ENST00000510852 DEPDC4Q8N2C3 294 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms