RNA–Protein interactions for RNA: ENST00000509774.5

PTPN20-222, Transcript of protein tyrosine phosphatase, non-receptor type 20, human

TSL 1 (best) BASIC

Gene PTPN20, Length 788 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN20-222	ENST00000509774	SART3	Q15020	963 aa	Known RBP	12.03	□□□□□ -0.48
PTPN20-222	ENST00000509774	WDR78	Q5VTH9	848 aa		12.03	□□□□□ -0.48
PTPN20-222	ENST00000509774	KRT40	Q6A162	431 aa		12.03	□□□□□ -0.48
PTPN20-222	ENST00000509774	RCSD1	Q6JBY9	416 aa		12.03	□□□□□ -0.48
PTPN20-222	ENST00000509774	TMTC2	Q8N394	836 aa		12.03	□□□□□ -0.48
PTPN20-222	ENST00000509774	GMCL1P1	Q8NEA9	526 aa		12.03	□□□□□ -0.48
PTPN20-222	ENST00000509774	TOX2	Q96NM4	488 aa		12.03	□□□□□ -0.48
PTPN20-222	ENST00000509774	HOXC10	Q9NYD6	342 aa		12.03	□□□□□ -0.48
PTPN20-222	ENST00000509774	PTPRZ1	P23471	2315 aa	Predicted RBP	12.03	□□□□□ -0.48
PTPN20-222	ENST00000509774	SPDYE16	A6NNV3	312 aa	Predicted RBP	12.02	□□□□□ -0.49
PTPN20-222	ENST00000509774		B4E1Z4	1266 aa		12.02	□□□□□ -0.49
PTPN20-222	ENST00000509774		F5H6K3	240 aa		12.02	□□□□□ -0.49
PTPN20-222	ENST00000509774	WDR46	O15213	610 aa	Known RBP	12.02	□□□□□ -0.49
PTPN20-222	ENST00000509774	TOP1	P11387	765 aa	Known RBP	12.02	□□□□□ -0.49
PTPN20-222	ENST00000509774	MYOG	P15173	224 aa		12.02	□□□□□ -0.49
PTPN20-222	ENST00000509774	MCC	P23508	829 aa		12.02	□□□□□ -0.49
PTPN20-222	ENST00000509774	MCM5	P33992	734 aa		12.02	□□□□□ -0.49
PTPN20-222	ENST00000509774	RABGGTB	P53611	331 aa		12.02	□□□□□ -0.49
PTPN20-222	ENST00000509774	KLRC3	Q07444	240 aa		12.02	□□□□□ -0.49
PTPN20-222	ENST00000509774	PRAMEF19	Q5SWL8	479 aa		12.02	□□□□□ -0.49
PTPN20-222	ENST00000509774	PPP2R2D	Q66LE6	453 aa		12.02	□□□□□ -0.49
PTPN20-222	ENST00000509774	OLFML2B	Q68BL8	750 aa		12.02	□□□□□ -0.49
PTPN20-222	ENST00000509774	CCDC174	Q6PII3	467 aa		12.02	□□□□□ -0.49
PTPN20-222	ENST00000509774	CATSPERG	Q6ZRH7	1159 aa		12.02	□□□□□ -0.49
PTPN20-222	ENST00000509774	NYAP1	Q6ZVC0	841 aa		12.02	□□□□□ -0.49
PTPN20-222	ENST00000509774	HLA-C	Q95604	372 aa		12.02	□□□□□ -0.49
PTPN20-222	ENST00000509774	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	12.02	□□□□□ -0.49
PTPN20-222	ENST00000509774	UBAC1	Q9BSL1	405 aa		12.02	□□□□□ -0.49
PTPN20-222	ENST00000509774	STX8	Q9UNK0	236 aa		12.02	□□□□□ -0.49
PTPN20-222	ENST00000509774	RABGAP1	Q9Y3P9	1069 aa		12.02	□□□□□ -0.49
PTPN20-222	ENST00000509774	CACNA1G	O43497	2377 aa		12.02	□□□□□ -0.49
PTPN20-222	ENST00000509774	COL4A4	P53420	1690 aa	Predicted RBP	12.02	□□□□□ -0.49
PTPN20-222	ENST00000509774	NEDD4	P46934	1319 aa		12.02	□□□□□ -0.49
PTPN20-222	ENST00000509774	ZFHX2	Q9C0A1	2572 aa	Predicted RBP	12.01	□□□□□ -0.49
PTPN20-222	ENST00000509774	ERICH2	A1L162	156 aa		12.01	□□□□□ -0.49
PTPN20-222	ENST00000509774	DCDC2C	A8MYV0	355 aa		12.01	□□□□□ -0.49
PTPN20-222	ENST00000509774	PSMA5	P28066	241 aa		12.01	□□□□□ -0.49
PTPN20-222	ENST00000509774	CCNA1	P78396	465 aa		12.01	□□□□□ -0.49
PTPN20-222	ENST00000509774	COG2	Q14746	738 aa		12.01	□□□□□ -0.49
PTPN20-222	ENST00000509774	CSPP1	Q1MSJ5	1256 aa		12.01	□□□□□ -0.49
PTPN20-222	ENST00000509774	PSRC1	Q6PGN9	363 aa	Predicted RBP	12.01	□□□□□ -0.49
PTPN20-222	ENST00000509774	LBX2	Q6XYB7	198 aa		12.01	□□□□□ -0.49
PTPN20-222	ENST00000509774	TMEM87B	Q96K49	555 aa		12.01	□□□□□ -0.49
PTPN20-222	ENST00000509774	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	12.01	□□□□□ -0.49
PTPN20-222	ENST00000509774	IVNS1ABP	Q9Y6Y0	642 aa		12.01	□□□□□ -0.49
PTPN20-222	ENST00000509774	WDR19	Q8NEZ3	1342 aa		12.01	□□□□□ -0.49
PTPN20-222	ENST00000509774	PLA2G6	O60733	806 aa		12	□□□□□ -0.49
PTPN20-222	ENST00000509774	FDX1	P10109	184 aa		12	□□□□□ -0.49
PTPN20-222	ENST00000509774	VCAM1	P19320	739 aa		12	□□□□□ -0.49
PTPN20-222	ENST00000509774	ANAPC15	P60006	121 aa		12	□□□□□ -0.49
PTPN20-222	ENST00000509774	PACS2	Q86VP3	889 aa		12	□□□□□ -0.49
PTPN20-222	ENST00000509774	GJD3	Q8N144	294 aa		12	□□□□□ -0.49
PTPN20-222	ENST00000509774	GMCL1	Q96IK5	515 aa		12	□□□□□ -0.49
PTPN20-222	ENST00000509774	NEK1	Q96PY6	1258 aa		12	□□□□□ -0.49
PTPN20-222	ENST00000509774	TMEM47	Q9BQJ4	181 aa		12	□□□□□ -0.49
PTPN20-222	ENST00000509774	IRX2	Q9BZI1	471 aa	Predicted RBP	12	□□□□□ -0.49
PTPN20-222	ENST00000509774	DCHS1	Q96JQ0	3298 aa		11.99	□□□□□ -0.49
PTPN20-222	ENST00000509774	EPOP	A6NHQ4	379 aa		11.99	□□□□□ -0.49
PTPN20-222	ENST00000509774	NMT2	O60551	498 aa		11.99	□□□□□ -0.49
PTPN20-222	ENST00000509774	PGK1	P00558	417 aa		11.99	□□□□□ -0.49
PTPN20-222	ENST00000509774	ALAD	P13716	330 aa		11.99	□□□□□ -0.49
PTPN20-222	ENST00000509774	LIFR	P42702	1097 aa		11.99	□□□□□ -0.49
PTPN20-222	ENST00000509774	ZYX	Q15942	572 aa	Known RBP	11.99	□□□□□ -0.49
PTPN20-222	ENST00000509774	E2F4	Q16254	413 aa		11.99	□□□□□ -0.49
PTPN20-222	ENST00000509774	STOX1	Q6ZVD7	989 aa		11.99	□□□□□ -0.49
PTPN20-222	ENST00000509774	DHX32	Q7L7V1	743 aa	Known RBP	11.99	□□□□□ -0.49
PTPN20-222	ENST00000509774	FAM178B	Q8IXR5	827 aa		11.99	□□□□□ -0.49
PTPN20-222	ENST00000509774	MB21D2	Q8IYB1	491 aa	Predicted RBP	11.99	□□□□□ -0.49
PTPN20-222	ENST00000509774	FBXL16	Q8N461	479 aa		11.99	□□□□□ -0.49
PTPN20-222	ENST00000509774	MB21D1	Q8N884	522 aa		11.99	□□□□□ -0.49
PTPN20-222	ENST00000509774	ENAH	Q8N8S7	591 aa	Predicted RBP	11.99	□□□□□ -0.49
PTPN20-222	ENST00000509774	CHURC1	Q8WUH1	139 aa		11.99	□□□□□ -0.49
PTPN20-222	ENST00000509774	DCAF4	Q8WV16	495 aa		11.99	□□□□□ -0.49
PTPN20-222	ENST00000509774	IL17RA	Q96F46	866 aa		11.99	□□□□□ -0.49
PTPN20-222	ENST00000509774	TM6SF1	Q9BZW5	370 aa		11.99	□□□□□ -0.49
PTPN20-222	ENST00000509774	RPAP3	Q9H6T3	665 aa	Predicted RBP	11.99	□□□□□ -0.49
PTPN20-222	ENST00000509774	KAT14	Q9H8E8	782 aa		11.99	□□□□□ -0.49
PTPN20-222	ENST00000509774	XPNPEP3	Q9NQH7	507 aa		11.99	□□□□□ -0.49
PTPN20-222	ENST00000509774	BTBD7	Q9P203	1132 aa		11.99	□□□□□ -0.49
PTPN20-222	ENST00000509774	FEM1B	Q9UK73	627 aa		11.99	□□□□□ -0.49
PTPN20-222	ENST00000509774	CACNA1H	O95180	2353 aa		11.98	□□□□□ -0.49
PTPN20-222	ENST00000509774	TNKS	O95271	1327 aa		11.98	□□□□□ -0.49
PTPN20-222	ENST00000509774	IFIT3	O14879	490 aa	Known RBP	11.98	□□□□□ -0.49
PTPN20-222	ENST00000509774	NDUFB10	O96000	172 aa		11.98	□□□□□ -0.49
PTPN20-222	ENST00000509774	BMP3	P12645	472 aa		11.98	□□□□□ -0.49
PTPN20-222	ENST00000509774	ADORA2A	P29274	412 aa		11.98	□□□□□ -0.49
PTPN20-222	ENST00000509774	SLC1A4	P43007	532 aa		11.98	□□□□□ -0.49
PTPN20-222	ENST00000509774	SEC23A	Q15436	765 aa		11.98	□□□□□ -0.49
PTPN20-222	ENST00000509774	C8orf34	Q49A92	452 aa		11.98	□□□□□ -0.49
PTPN20-222	ENST00000509774	GPATCH4	Q5T3I0	446 aa	Known RBP	11.98	□□□□□ -0.49
PTPN20-222	ENST00000509774	IFIT1B	Q5T764	474 aa	Known RBP	11.98	□□□□□ -0.49
PTPN20-222	ENST00000509774	SLFN13	Q68D06	897 aa		11.98	□□□□□ -0.49
PTPN20-222	ENST00000509774	CYB5R4	Q7L1T6	521 aa		11.98	□□□□□ -0.49
PTPN20-222	ENST00000509774	DPP9	Q86TI2	863 aa		11.98	□□□□□ -0.49
PTPN20-222	ENST00000509774	FAM160B2	Q86V87	743 aa		11.98	□□□□□ -0.49
PTPN20-222	ENST00000509774	CLEC10A	Q8IUN9	316 aa		11.98	□□□□□ -0.49
PTPN20-222	ENST00000509774	TMEM199	Q8N511	208 aa		11.98	□□□□□ -0.49
PTPN20-222	ENST00000509774	PRPF38A	Q8NAV1	312 aa	Known RBP	11.98	□□□□□ -0.49
PTPN20-222	ENST00000509774	IGDCC4	Q8TDY8	1250 aa		11.98	□□□□□ -0.49
PTPN20-222	ENST00000509774	MAP3K14	Q99558	947 aa		11.98	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms