RNA–Protein interactions for RNA: ENST00000508818.5

UBE2D3-227, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-227ENST00000508818 AMNQ9BXJ7 453 aa11.75□□□□□ -0.53
UBE2D3-227ENST00000508818 JMJD4Q9H9V9 463 aa11.75□□□□□ -0.53
UBE2D3-227ENST00000508818 SUPT20HL2P0C7V6 817 aa11.74□□□□□ -0.53
UBE2D3-227ENST00000508818 CSF2RAP15509 400 aa11.74□□□□□ -0.53
UBE2D3-227ENST00000508818 CYP2C18P33260 490 aa11.74□□□□□ -0.53
UBE2D3-227ENST00000508818 CHMP4BP1P59074 171 aa11.74□□□□□ -0.53
UBE2D3-227ENST00000508818 PTH1RQ03431 593 aa11.74□□□□□ -0.53
UBE2D3-227ENST00000508818 STXBP2Q15833 593 aa11.74□□□□□ -0.53
UBE2D3-227ENST00000508818 FAM47CQ5HY64 1035 aa11.74□□□□□ -0.53
UBE2D3-227ENST00000508818 ARHGEF16Q5VV41 709 aa11.74□□□□□ -0.53
UBE2D3-227ENST00000508818 PSRC1Q6PGN9 363 aaPredicted RBP11.74□□□□□ -0.53
UBE2D3-227ENST00000508818 SEPT14Q6ZU15 432 aa11.74□□□□□ -0.53
UBE2D3-227ENST00000508818 SLC43A3Q8NBI5 491 aa11.74□□□□□ -0.53
UBE2D3-227ENST00000508818 NCOA7Q8NI08 942 aa11.74□□□□□ -0.53
UBE2D3-227ENST00000508818 SYTL5Q8TDW5 730 aaPredicted RBP11.74□□□□□ -0.53
UBE2D3-227ENST00000508818 TAAR1Q96RJ0 339 aa11.74□□□□□ -0.53
UBE2D3-227ENST00000508818 RMDN3Q96TC7 470 aa11.74□□□□□ -0.53
UBE2D3-227ENST00000508818 TRPV6Q9H1D0 765 aa11.74□□□□□ -0.53
UBE2D3-227ENST00000508818 MTIF3Q9H2K0 278 aaKnown RBP11.74□□□□□ -0.53
UBE2D3-227ENST00000508818 SEMA6BQ9H3T3 888 aa11.74□□□□□ -0.53
UBE2D3-227ENST00000508818 HIPK3Q9H422 1215 aa11.74□□□□□ -0.53
UBE2D3-227ENST00000508818 SZT2Q5T011 3432 aa11.74□□□□□ -0.53
UBE2D3-227ENST00000508818 CFBP00751 764 aa11.73□□□□□ -0.53
UBE2D3-227ENST00000508818 CD4P01730 458 aa11.73□□□□□ -0.53
UBE2D3-227ENST00000508818 CYP21A2P08686 494 aa11.73□□□□□ -0.53
UBE2D3-227ENST00000508818 ACRP10323 421 aa11.73□□□□□ -0.53
UBE2D3-227ENST00000508818 EDNRBP24530 442 aa11.73□□□□□ -0.53
UBE2D3-227ENST00000508818 WTAPQ15007 396 aa11.73□□□□□ -0.53
UBE2D3-227ENST00000508818 SEC23AQ15436 765 aa11.73□□□□□ -0.53
UBE2D3-227ENST00000508818 CYB5R4Q7L1T6 521 aa11.73□□□□□ -0.53
UBE2D3-227ENST00000508818 CATIPQ7Z7H3 387 aa11.73□□□□□ -0.53
UBE2D3-227ENST00000508818 RPUSD2Q8IZ73 545 aaKnown RBP11.73□□□□□ -0.53
UBE2D3-227ENST00000508818 STAG2Q8N3U4 1231 aa11.73□□□□□ -0.53
UBE2D3-227ENST00000508818 TBC1D5Q92609 795 aa11.73□□□□□ -0.53
UBE2D3-227ENST00000508818 IWS1Q96ST2 819 aa11.73□□□□□ -0.53
UBE2D3-227ENST00000508818 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.73□□□□□ -0.53
UBE2D3-227ENST00000508818 IL25Q9H293 177 aa11.73□□□□□ -0.53
UBE2D3-227ENST00000508818 PCDHA1Q9Y5I3 950 aa11.73□□□□□ -0.53
UBE2D3-227ENST00000508818 LAMA4Q16363 1823 aa11.72□□□□□ -0.53
UBE2D3-227ENST00000508818 GRIN2DO15399 1336 aa11.72□□□□□ -0.53
UBE2D3-227ENST00000508818 E7EWF7 191 aa11.72□□□□□ -0.53
UBE2D3-227ENST00000508818 ZBTB5O15062 677 aa11.72□□□□□ -0.53
UBE2D3-227ENST00000508818 SGSM2O43147 1006 aa11.72□□□□□ -0.53
UBE2D3-227ENST00000508818 B4GALT4O60513 344 aa11.72□□□□□ -0.53
UBE2D3-227ENST00000508818 EIF3JO75822 258 aaKnown RBP11.72□□□□□ -0.53
UBE2D3-227ENST00000508818 FGBP02675 491 aa11.72□□□□□ -0.53
UBE2D3-227ENST00000508818 CCL23P55773 120 aa11.72□□□□□ -0.53
UBE2D3-227ENST00000508818 TMEM67Q5HYA8 995 aa11.72□□□□□ -0.53
UBE2D3-227ENST00000508818 TMEM240Q5SV17 173 aa11.72□□□□□ -0.53
UBE2D3-227ENST00000508818 ZNF365Q70YC5 407 aa11.72□□□□□ -0.53
UBE2D3-227ENST00000508818 CHST3Q7LGC8 479 aa11.72□□□□□ -0.53
UBE2D3-227ENST00000508818 HOMER1Q86YM7 354 aa11.72□□□□□ -0.53
UBE2D3-227ENST00000508818 COPS5Q92905 334 aa11.72□□□□□ -0.53
UBE2D3-227ENST00000508818 GUCD1Q96NT3 240 aa11.72□□□□□ -0.53
UBE2D3-227ENST00000508818 CDX2Q99626 313 aaPredicted RBP11.72□□□□□ -0.53
UBE2D3-227ENST00000508818 ALDH8A1Q9H2A2 487 aaPredicted RBP11.72□□□□□ -0.53
UBE2D3-227ENST00000508818 IL23AQ9NPF7 189 aa11.72□□□□□ -0.53
UBE2D3-227ENST00000508818 NOD1Q9Y239 953 aa11.72□□□□□ -0.53
UBE2D3-227ENST00000508818 PALM3A6NDB9 673 aaPredicted RBP11.71□□□□□ -0.53
UBE2D3-227ENST00000508818 A6NJR5 290 aa11.71□□□□□ -0.53
UBE2D3-227ENST00000508818 GH1P01241 217 aa11.71□□□□□ -0.53
UBE2D3-227ENST00000508818 NR3C2P08235 984 aa11.71□□□□□ -0.53
UBE2D3-227ENST00000508818 MYCLP12524 364 aaPredicted RBP11.71□□□□□ -0.53
UBE2D3-227ENST00000508818 EIF2AK2P19525 551 aaKnown RBP11.71□□□□□ -0.53
UBE2D3-227ENST00000508818 PURAQ00577 322 aaKnown RBP11.71□□□□□ -0.53
UBE2D3-227ENST00000508818 GRM4Q14833 912 aa11.71□□□□□ -0.53
UBE2D3-227ENST00000508818 NBPF20Q3BBV1 942 aa11.71□□□□□ -0.53
UBE2D3-227ENST00000508818 CASC1Q6TDU7 716 aa11.71□□□□□ -0.53
UBE2D3-227ENST00000508818 C16orf59Q7L2K0 433 aa11.71□□□□□ -0.53
UBE2D3-227ENST00000508818 ZNF579Q8NAF0 562 aaKnown RBP11.71□□□□□ -0.53
UBE2D3-227ENST00000508818 RETREG2Q8NC44 543 aa11.71□□□□□ -0.53
UBE2D3-227ENST00000508818 NOC4LQ9BVI4 516 aaKnown RBP11.71□□□□□ -0.53
UBE2D3-227ENST00000508818 MAP3K20Q9NYL2 800 aaKnown RBP11.71□□□□□ -0.53
UBE2D3-227ENST00000508818 MAD2L2Q9UI95 211 aa11.71□□□□□ -0.53
UBE2D3-227ENST00000508818 TMEM265A0A087WTH1 108 aa11.7□□□□□ -0.54
UBE2D3-227ENST00000508818 GCOM1H8Y6P7 765 aaPredicted RBP11.7□□□□□ -0.54
UBE2D3-227ENST00000508818 DLL1O00548 723 aa11.7□□□□□ -0.54
UBE2D3-227ENST00000508818 POLR2MP0CAP2 368 aa11.7□□□□□ -0.54
UBE2D3-227ENST00000508818 CASTP20810 708 aaKnown RBP11.7□□□□□ -0.54
UBE2D3-227ENST00000508818 LY6KQ17RY6 165 aa11.7□□□□□ -0.54
UBE2D3-227ENST00000508818 NFRKBQ6P4R8 1299 aa11.7□□□□□ -0.54
UBE2D3-227ENST00000508818 NFXL1Q6ZNB6 911 aa11.7□□□□□ -0.54
UBE2D3-227ENST00000508818 SAMD3Q8N6K7 520 aa11.7□□□□□ -0.54
UBE2D3-227ENST00000508818 CTCFLQ8NI51 663 aaPredicted RBP11.7□□□□□ -0.54
UBE2D3-227ENST00000508818 AFG1LQ8WV93 481 aa11.7□□□□□ -0.54
UBE2D3-227ENST00000508818 MAP4K1Q92918 833 aa11.7□□□□□ -0.54
UBE2D3-227ENST00000508818 TIFAQ96CG3 184 aa11.7□□□□□ -0.54
UBE2D3-227ENST00000508818 PIGSQ96S52 555 aa11.7□□□□□ -0.54
UBE2D3-227ENST00000508818 PXMP2Q9NR77 195 aa11.7□□□□□ -0.54
UBE2D3-227ENST00000508818 TRMT13Q9NUP7 481 aaKnown RBP11.7□□□□□ -0.54
UBE2D3-227ENST00000508818 COL20A1Q9P218 1284 aa11.7□□□□□ -0.54
UBE2D3-227ENST00000508818 MSRAQ9UJ68 235 aa11.7□□□□□ -0.54
UBE2D3-227ENST00000508818 RBM8AQ9Y5S9 174 aaKnown RBP11.7□□□□□ -0.54
UBE2D3-227ENST00000508818 MRVI1Q9Y6F6 885 aa11.7□□□□□ -0.54
UBE2D3-227ENST00000508818 LAMA3Q16787 3333 aa11.7□□□□□ -0.54
UBE2D3-227ENST00000508818 UMODL1Q5DID0 1318 aa11.69□□□□□ -0.54
UBE2D3-227ENST00000508818 LCTP09848 1927 aa11.69□□□□□ -0.54
UBE2D3-227ENST00000508818 PNMA6FA0A0J9YX94 578 aa11.69□□□□□ -0.54
UBE2D3-227ENST00000508818 ZBBXA8MT70 800 aa11.69□□□□□ -0.54
UBE2D3-227ENST00000508818 CYP2C9P11712 490 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms