RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 EIF4A2Q14240 407 aaKnown RBP8.47□□□□□ -1.05
PDGFRA-206ENST00000508170 ANKRD1Q15327 319 aa8.47□□□□□ -1.05
PDGFRA-206ENST00000508170 TAF7Q15545 349 aaPredicted RBP8.47□□□□□ -1.05
PDGFRA-206ENST00000508170 TMEM240Q5SV17 173 aa8.47□□□□□ -1.05
PDGFRA-206ENST00000508170 B3GNT9Q6UX72 402 aa8.47□□□□□ -1.05
PDGFRA-206ENST00000508170 SLC9B2Q86UD5 537 aa8.47□□□□□ -1.05
PDGFRA-206ENST00000508170 NLRP8Q86W28 1048 aa8.47□□□□□ -1.05
PDGFRA-206ENST00000508170 HEATR4Q86WZ0 1026 aa8.47□□□□□ -1.05
PDGFRA-206ENST00000508170 FAM178BQ8IXR5 827 aa8.47□□□□□ -1.05
PDGFRA-206ENST00000508170 CCDC144CPQ8IYA2 1237 aa8.47□□□□□ -1.05
PDGFRA-206ENST00000508170 TNS4Q8IZW8 715 aa8.47□□□□□ -1.05
PDGFRA-206ENST00000508170 ZNF540Q8NDQ6 660 aa8.47□□□□□ -1.05
PDGFRA-206ENST00000508170 FERMT2Q96AC1 680 aa8.47□□□□□ -1.05
PDGFRA-206ENST00000508170 JPH4Q96JJ6 628 aa8.47□□□□□ -1.05
PDGFRA-206ENST00000508170 FAM193BQ96PV7 902 aaPredicted RBP8.47□□□□□ -1.05
PDGFRA-206ENST00000508170 TCHPQ9BT92 498 aa8.47□□□□□ -1.05
PDGFRA-206ENST00000508170 DNAI2Q9GZS0 605 aa8.47□□□□□ -1.05
PDGFRA-206ENST00000508170 KIAA1683Q9H0B3 1180 aa8.47□□□□□ -1.05
PDGFRA-206ENST00000508170 RNF39Q9H2S5 420 aa8.47□□□□□ -1.05
PDGFRA-206ENST00000508170 GRPEL1Q9HAV7 217 aa8.47□□□□□ -1.05
PDGFRA-206ENST00000508170 ZNHIT6Q9NWK9 470 aaKnown RBP8.47□□□□□ -1.05
PDGFRA-206ENST00000508170 TMOD4Q9NZQ9 345 aa8.47□□□□□ -1.05
PDGFRA-206ENST00000508170 KNSTRNQ9Y448 316 aa8.47□□□□□ -1.05
PDGFRA-206ENST00000508170 PCDHGB6Q9Y5F9 930 aa8.47□□□□□ -1.05
PDGFRA-206ENST00000508170 SYNJ2BP-COX16A0A087WUM0 186 aa8.46□□□□□ -1.05
PDGFRA-206ENST00000508170 E2F6O75461 281 aa8.46□□□□□ -1.05
PDGFRA-206ENST00000508170 EOMESO95936 686 aa8.46□□□□□ -1.05
PDGFRA-206ENST00000508170 RECQLP46063 649 aaPredicted RBP8.46□□□□□ -1.05
PDGFRA-206ENST00000508170 MXI1P50539 228 aa8.46□□□□□ -1.05
PDGFRA-206ENST00000508170 PMS1P54277 932 aaKnown RBP8.46□□□□□ -1.05
PDGFRA-206ENST00000508170 CDC16Q13042 620 aa8.46□□□□□ -1.05
PDGFRA-206ENST00000508170 PCBP2Q15366 365 aaKnown RBP eCLIP8.46□□□□□ -1.05
PDGFRA-206ENST00000508170 RAPH1Q70E73 1250 aa8.46□□□□□ -1.05
PDGFRA-206ENST00000508170 ETFBKMTQ8IXQ9 262 aa8.46□□□□□ -1.05
PDGFRA-206ENST00000508170 ZNF619Q8N2I2 560 aa8.46□□□□□ -1.05
PDGFRA-206ENST00000508170 TBCBQ99426 244 aa8.46□□□□□ -1.05
PDGFRA-206ENST00000508170 BCO2Q9BYV7 579 aa8.46□□□□□ -1.05
PDGFRA-206ENST00000508170 ARFGAP3Q9NP61 516 aa8.46□□□□□ -1.05
PDGFRA-206ENST00000508170 UBN1Q9NPG3 1134 aa8.46□□□□□ -1.05
PDGFRA-206ENST00000508170 ITM2CQ9NQX7 267 aa8.46□□□□□ -1.05
PDGFRA-206ENST00000508170 PLSCR4Q9NRQ2 329 aa8.46□□□□□ -1.05
PDGFRA-206ENST00000508170 NSMCE4AQ9NXX6 385 aa8.46□□□□□ -1.05
PDGFRA-206ENST00000508170 DUSP12Q9UNI6 340 aa8.46□□□□□ -1.05
PDGFRA-206ENST00000508170 H7C0S8 307 aa8.46□□□□□ -1.06
PDGFRA-206ENST00000508170 CLASP2O75122 1294 aaKnown RBP8.46□□□□□ -1.06
PDGFRA-206ENST00000508170 ALAS1P13196 640 aa8.46□□□□□ -1.06
PDGFRA-206ENST00000508170 TNFAIP2Q03169 654 aa8.46□□□□□ -1.06
PDGFRA-206ENST00000508170 UBXN1Q04323 297 aa8.46□□□□□ -1.06
PDGFRA-206ENST00000508170 PPA1Q15181 289 aa8.46□□□□□ -1.06
PDGFRA-206ENST00000508170 ZER1Q7Z7L7 766 aa8.46□□□□□ -1.06
PDGFRA-206ENST00000508170 TMTC1Q8IUR5 882 aa8.46□□□□□ -1.06
PDGFRA-206ENST00000508170 KLHL23Q8NBE8 558 aa8.46□□□□□ -1.06
PDGFRA-206ENST00000508170 DRAXINQ8NBI3 349 aaPredicted RBP8.46□□□□□ -1.06
PDGFRA-206ENST00000508170 ERCC4Q92889 916 aaPredicted RBP8.46□□□□□ -1.06
PDGFRA-206ENST00000508170 TAAR9Q96RI9 348 aa8.46□□□□□ -1.06
PDGFRA-206ENST00000508170 TRIM17Q9Y577 477 aa8.46□□□□□ -1.06
PDGFRA-206ENST00000508170 TOP2BQ02880 1626 aa8.46□□□□□ -1.06
PDGFRA-206ENST00000508170 POTECB2RU33 542 aa8.45□□□□□ -1.06
PDGFRA-206ENST00000508170 CTNND1O60716 968 aaKnown RBP8.45□□□□□ -1.06
PDGFRA-206ENST00000508170 PF4P02776 101 aa8.45□□□□□ -1.06
PDGFRA-206ENST00000508170 THEGLP0DJG4 465 aa8.45□□□□□ -1.06
PDGFRA-206ENST00000508170 ATP6V1AP38606 617 aa8.45□□□□□ -1.06
PDGFRA-206ENST00000508170 PRR16Q569H4 304 aa8.45□□□□□ -1.06
PDGFRA-206ENST00000508170 KAZNQ674X7 775 aa8.45□□□□□ -1.06
PDGFRA-206ENST00000508170 CCAR2Q8N163 923 aaKnown RBP8.45□□□□□ -1.06
PDGFRA-206ENST00000508170 IPMKQ8NFU5 416 aa8.45□□□□□ -1.06
PDGFRA-206ENST00000508170 UTP15Q8TED0 518 aaKnown RBP8.45□□□□□ -1.06
PDGFRA-206ENST00000508170 PI4K2AQ9BTU6 479 aa8.45□□□□□ -1.06
PDGFRA-206ENST00000508170 GPRC5BQ9NZH0 403 aa8.45□□□□□ -1.06
PDGFRA-206ENST00000508170 CCDC39Q9UFE4 941 aa8.45□□□□□ -1.06
PDGFRA-206ENST00000508170 PARP3Q9Y6F1 533 aa8.45□□□□□ -1.06
PDGFRA-206ENST00000508170 CLIP1P30622 1438 aa8.45□□□□□ -1.06
PDGFRA-206ENST00000508170 BIVM-ERCC5R4GMW8 1640 aa8.45□□□□□ -1.06
PDGFRA-206ENST00000508170 DNAJC8O75937 253 aaPredicted RBP8.45□□□□□ -1.06
PDGFRA-206ENST00000508170 APBA3O96018 575 aa8.45□□□□□ -1.06
PDGFRA-206ENST00000508170 HOXA10P31260 410 aaPredicted RBP8.45□□□□□ -1.06
PDGFRA-206ENST00000508170 CACNB1Q02641 598 aaPredicted RBP8.45□□□□□ -1.06
PDGFRA-206ENST00000508170 CENPCQ03188 943 aa8.45□□□□□ -1.06
PDGFRA-206ENST00000508170 MMEL1Q495T6 779 aa8.45□□□□□ -1.06
PDGFRA-206ENST00000508170 CCDC38Q502W7 563 aa8.45□□□□□ -1.06
PDGFRA-206ENST00000508170 SNAP47Q5SQN1 464 aa8.45□□□□□ -1.06
PDGFRA-206ENST00000508170 SLC30A6Q6NXT4 461 aa8.45□□□□□ -1.06
PDGFRA-206ENST00000508170 LSRQ86X29 649 aaPredicted RBP8.45□□□□□ -1.06
PDGFRA-206ENST00000508170 RNF168Q8IYW5 571 aaPredicted RBP8.45□□□□□ -1.06
PDGFRA-206ENST00000508170 VPS52Q8N1B4 723 aa8.45□□□□□ -1.06
PDGFRA-206ENST00000508170 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.45□□□□□ -1.06
PDGFRA-206ENST00000508170 UCMAQ8WVF2 138 aa8.45□□□□□ -1.06
PDGFRA-206ENST00000508170 KIF1BPQ96EK5 621 aa8.45□□□□□ -1.06
PDGFRA-206ENST00000508170 HSPBAP1Q96EW2 488 aa8.45□□□□□ -1.06
PDGFRA-206ENST00000508170 KCNK17Q96T54 332 aa8.45□□□□□ -1.06
PDGFRA-206ENST00000508170 APOL5Q9BWW9 433 aa8.45□□□□□ -1.06
PDGFRA-206ENST00000508170 TEX13BQ9BXU2 312 aa8.45□□□□□ -1.06
PDGFRA-206ENST00000508170 VPS11Q9H270 941 aa8.45□□□□□ -1.06
PDGFRA-206ENST00000508170 GGNBP2Q9H3C7 697 aa8.45□□□□□ -1.06
PDGFRA-206ENST00000508170 NMRK2Q9NPI5 230 aa8.45□□□□□ -1.06
PDGFRA-206ENST00000508170 HPF1Q9NWY4 346 aa8.45□□□□□ -1.06
PDGFRA-206ENST00000508170 CASQ2O14958 399 aaPredicted RBP8.44□□□□□ -1.06
PDGFRA-206ENST00000508170 KPNA6O60684 536 aa8.44□□□□□ -1.06
PDGFRA-206ENST00000508170 PQBP1O60828 265 aaKnown RBP8.44□□□□□ -1.06
PDGFRA-206ENST00000508170 PPM1AP35813 382 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms