RNA–Protein interactions for RNA: ENST00000507778.1

HMGB1P28-201, Transcript of high mobility group box 1 pseudogene 28, humanhuman

BASIC

Gene HMGB1P28, Length 552 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P28-201ENST00000507778 RBM10P98175 930 aaKnown RBP5.75□□□□□ -1.49
HMGB1P28-201ENST00000507778 PAK1Q13153 545 aa5.75□□□□□ -1.49
HMGB1P28-201ENST00000507778 LSAMPQ13449 338 aa5.75□□□□□ -1.49
HMGB1P28-201ENST00000507778 SLC14A2Q15849 920 aa5.75□□□□□ -1.49
HMGB1P28-201ENST00000507778 XP32Q5T750 250 aa5.75□□□□□ -1.49
HMGB1P28-201ENST00000507778 UBE2R2Q712K3 238 aaPredicted RBP5.75□□□□□ -1.49
HMGB1P28-201ENST00000507778 THNSL2Q86YJ6 484 aa5.75□□□□□ -1.49
HMGB1P28-201ENST00000507778 ZC3H7AQ8IWR0 971 aaKnown RBP5.75□□□□□ -1.49
HMGB1P28-201ENST00000507778 AHI1Q8N157 1196 aa5.75□□□□□ -1.49
HMGB1P28-201ENST00000507778 Q8N3U1 123 aa5.75□□□□□ -1.49
HMGB1P28-201ENST00000507778 OXR1Q8N573 874 aa5.75□□□□□ -1.49
HMGB1P28-201ENST00000507778 CAAP1Q9H8G2 361 aa5.75□□□□□ -1.49
HMGB1P28-201ENST00000507778 PRDM7Q9NQW5 492 aa5.75□□□□□ -1.49
HMGB1P28-201ENST00000507778 MAPRE3Q9UPY8 281 aa5.75□□□□□ -1.49
HMGB1P28-201ENST00000507778 NOP58Q9Y2X3 529 aaKnown RBP5.75□□□□□ -1.49
HMGB1P28-201ENST00000507778 hCG_2014768A0A024R1R8 64 aa5.74□□□□□ -1.49
HMGB1P28-201ENST00000507778 A0A1W2PQ27 194 aa5.74□□□□□ -1.49
HMGB1P28-201ENST00000507778 A0A1W2PQ64 194 aa5.74□□□□□ -1.49
HMGB1P28-201ENST00000507778 A0A1W2PQC6 194 aa5.74□□□□□ -1.49
HMGB1P28-201ENST00000507778 A0A1W2PQD8 194 aa5.74□□□□□ -1.49
HMGB1P28-201ENST00000507778 WTIPA6NIX2 430 aaPredicted RBP5.74□□□□□ -1.49
HMGB1P28-201ENST00000507778 GSG1L2A8MUP6 293 aa5.74□□□□□ -1.49
HMGB1P28-201ENST00000507778 ARVCFO00192 962 aa5.74□□□□□ -1.49
HMGB1P28-201ENST00000507778 USP2O75604 605 aaPredicted RBP5.74□□□□□ -1.49
HMGB1P28-201ENST00000507778 HMGB1P09429 215 aaKnown RBP5.74□□□□□ -1.49
HMGB1P28-201ENST00000507778 CNGA1P29973 690 aa5.74□□□□□ -1.49
HMGB1P28-201ENST00000507778 SOX5P35711 763 aa5.74□□□□□ -1.49
HMGB1P28-201ENST00000507778 HK2P52789 917 aa5.74□□□□□ -1.49
HMGB1P28-201ENST00000507778 IGBP1P78318 339 aa5.74□□□□□ -1.49
HMGB1P28-201ENST00000507778 CHRNEQ04844 493 aa5.74□□□□□ -1.49
HMGB1P28-201ENST00000507778 ZNF460Q14592 562 aa5.74□□□□□ -1.49
HMGB1P28-201ENST00000507778 CT47A1Q5JQC4 288 aaPredicted RBP5.74□□□□□ -1.49
HMGB1P28-201ENST00000507778 ZMYM1Q5SVZ6 1142 aa5.74□□□□□ -1.49
HMGB1P28-201ENST00000507778 NFXL1Q6ZNB6 911 aa5.74□□□□□ -1.49
HMGB1P28-201ENST00000507778 CEP128Q6ZU80 1094 aa5.74□□□□□ -1.49
HMGB1P28-201ENST00000507778 SLCO6A1Q86UG4 719 aa5.74□□□□□ -1.49
HMGB1P28-201ENST00000507778 TP53INP2Q8IXH6 220 aa5.74□□□□□ -1.49
HMGB1P28-201ENST00000507778 PPM1KQ8N3J5 372 aa5.74□□□□□ -1.49
HMGB1P28-201ENST00000507778 AGBL5Q8NDL9 886 aa5.74□□□□□ -1.49
HMGB1P28-201ENST00000507778 PDZD8Q8NEN9 1154 aa5.74□□□□□ -1.49
HMGB1P28-201ENST00000507778 NLGN2Q8NFZ4 835 aa5.74□□□□□ -1.49
HMGB1P28-201ENST00000507778 DPF3Q92784 378 aa5.74□□□□□ -1.49
HMGB1P28-201ENST00000507778 JMJD8Q96S16 334 aa5.74□□□□□ -1.49
HMGB1P28-201ENST00000507778 PCDH12Q9NPG4 1184 aa5.74□□□□□ -1.49
HMGB1P28-201ENST00000507778 PCMTD2Q9NV79 361 aa5.74□□□□□ -1.49
HMGB1P28-201ENST00000507778 BTG4Q9NY30 223 aa5.74□□□□□ -1.49
HMGB1P28-201ENST00000507778 JMJD7P0C870 316 aa5.73□□□□□ -1.49
HMGB1P28-201ENST00000507778 HSP90B1P14625 803 aaKnown RBP5.73□□□□□ -1.49
HMGB1P28-201ENST00000507778 KCNA6P17658 529 aa5.73□□□□□ -1.49
HMGB1P28-201ENST00000507778 POU3F2P20265 443 aaPredicted RBP5.73□□□□□ -1.49
HMGB1P28-201ENST00000507778 STAT3P40763 770 aa5.73□□□□□ -1.49
HMGB1P28-201ENST00000507778 BCL6P41182 706 aa5.73□□□□□ -1.49
HMGB1P28-201ENST00000507778 ANAPC15P60006 121 aa5.73□□□□□ -1.49
HMGB1P28-201ENST00000507778 AMPD3Q01432 767 aa5.73□□□□□ -1.49
HMGB1P28-201ENST00000507778 PLCL1Q15111 1095 aa5.73□□□□□ -1.49
HMGB1P28-201ENST00000507778 CFAP100Q494V2 611 aa5.73□□□□□ -1.49
HMGB1P28-201ENST00000507778 CDCA2Q69YH5 1023 aaPredicted RBP5.73□□□□□ -1.49
HMGB1P28-201ENST00000507778 GALNT18Q6P9A2 607 aa5.73□□□□□ -1.49
HMGB1P28-201ENST00000507778 CEP68Q76N32 757 aa5.73□□□□□ -1.49
HMGB1P28-201ENST00000507778 DDX53Q86TM3 631 aaKnown RBP5.73□□□□□ -1.49
HMGB1P28-201ENST00000507778 PCDH19Q8TAB3 1148 aa5.73□□□□□ -1.49
HMGB1P28-201ENST00000507778 ASIC4Q96FT7 647 aa5.73□□□□□ -1.49
HMGB1P28-201ENST00000507778 CLDND1Q9NY35 253 aa5.73□□□□□ -1.49
HMGB1P28-201ENST00000507778 GULP1Q9UBP9 304 aa5.73□□□□□ -1.49
HMGB1P28-201ENST00000507778 TAF6LQ9Y6J9 622 aa5.73□□□□□ -1.49
HMGB1P28-201ENST00000507778 FITM1A5D6W6 292 aa5.72□□□□□ -1.49
HMGB1P28-201ENST00000507778 FAM47E-STBD1D6RA91 191 aa5.72□□□□□ -1.49
HMGB1P28-201ENST00000507778 H7BY64 318 aa5.72□□□□□ -1.49
HMGB1P28-201ENST00000507778 NPTXRO95502 500 aa5.72□□□□□ -1.49
HMGB1P28-201ENST00000507778 SOD2P04179 222 aa5.72□□□□□ -1.49
HMGB1P28-201ENST00000507778 SRGAP2CP0DJJ0 459 aa5.72□□□□□ -1.49
HMGB1P28-201ENST00000507778 GRK2P25098 689 aa5.72□□□□□ -1.49
HMGB1P28-201ENST00000507778 GRK3P35626 688 aa5.72□□□□□ -1.49
HMGB1P28-201ENST00000507778 GDNFP39905 211 aa5.72□□□□□ -1.49
HMGB1P28-201ENST00000507778 CORO7P57737 925 aa5.72□□□□□ -1.49
HMGB1P28-201ENST00000507778 HSF5Q4G112 596 aaPredicted RBP5.72□□□□□ -1.49
HMGB1P28-201ENST00000507778 ZCCHC8Q6NZY4 707 aaKnown RBP5.72□□□□□ -1.49
HMGB1P28-201ENST00000507778 DDX46Q7L014 1031 aaKnown RBP5.72□□□□□ -1.49
HMGB1P28-201ENST00000507778 RNF180Q86T96 592 aa5.72□□□□□ -1.49
HMGB1P28-201ENST00000507778 UBR7Q8N806 425 aa5.72□□□□□ -1.49
HMGB1P28-201ENST00000507778 LEO1Q8WVC0 666 aaPredicted RBP5.72□□□□□ -1.49
HMGB1P28-201ENST00000507778 FBXW5Q969U6 566 aa5.72□□□□□ -1.49
HMGB1P28-201ENST00000507778 TMEM169Q96HH4 297 aa5.72□□□□□ -1.49
HMGB1P28-201ENST00000507778 MARCH2Q9P0N8 246 aa5.72□□□□□ -1.49
HMGB1P28-201ENST00000507778 SAMD15Q9P1V8 674 aa5.72□□□□□ -1.49
HMGB1P28-201ENST00000507778 FBXL7Q9UJT9 491 aa5.72□□□□□ -1.49
HMGB1P28-201ENST00000507778 SCO2A0A1W2PP80 73 aa5.71□□□□□ -1.5
HMGB1P28-201ENST00000507778 FAM83GA6ND36 823 aa5.71□□□□□ -1.5
HMGB1P28-201ENST00000507778 WNT9AO14904 365 aa5.71□□□□□ -1.5
HMGB1P28-201ENST00000507778 GSTA4O15217 222 aa5.71□□□□□ -1.5
HMGB1P28-201ENST00000507778 NRDCO43847 1150 aa5.71□□□□□ -1.5
HMGB1P28-201ENST00000507778 KPNA6O60684 536 aa5.71□□□□□ -1.5
HMGB1P28-201ENST00000507778 PPP1R11O60927 126 aaPredicted RBP5.71□□□□□ -1.5
HMGB1P28-201ENST00000507778 ADAMTS4O75173 837 aa5.71□□□□□ -1.5
HMGB1P28-201ENST00000507778 FUCA1P04066 466 aa5.71□□□□□ -1.5
HMGB1P28-201ENST00000507778 ST5P78524 1137 aa5.71□□□□□ -1.5
HMGB1P28-201ENST00000507778 PCBP1Q15365 356 aaKnown RBP eCLIP5.71□□□□□ -1.5
HMGB1P28-201ENST00000507778 FAM47CQ5HY64 1035 aa5.71□□□□□ -1.5
HMGB1P28-201ENST00000507778 PIK3R6Q5UE93 754 aa5.71□□□□□ -1.5
HMGB1P28-201ENST00000507778 ABHD17CQ6PCB6 329 aa5.71□□□□□ -1.5
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