RNA–Protein interactions for RNA: ENST00000506981.1

LMNA-221, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-221ENST00000506981 ADD1P35611 737 aaKnown RBP22.27■■□□□ 1.16
LMNA-221ENST00000506981 EVCP57679 992 aa22.27■■□□□ 1.16
LMNA-221ENST00000506981 AKAP17AQ02040 695 aaKnown RBP22.27■■□□□ 1.16
LMNA-221ENST00000506981 FCHSD1Q86WN1 690 aa22.27■■□□□ 1.16
LMNA-221ENST00000506981 ZNF713Q8N859 430 aaPredicted RBP22.27■■□□□ 1.16
LMNA-221ENST00000506981 GPKOWQ92917 476 aaPredicted RBP eCLIP22.27■■□□□ 1.16
LMNA-221ENST00000506981 PXMP2Q9NR77 195 aa22.27■■□□□ 1.16
LMNA-221ENST00000506981 FAM217BQ9NTX9 383 aaPredicted RBP22.27■■□□□ 1.16
LMNA-221ENST00000506981 V9GY48 417 aaPredicted RBP22.27■■□□□ 1.16
LMNA-221ENST00000506981 PDIA3P30101 505 aaKnown RBP22.26■■□□□ 1.15
LMNA-221ENST00000506981 CCT2P78371 535 aaKnown RBP22.26■■□□□ 1.15
LMNA-221ENST00000506981 FUT2Q10981 343 aa22.26■■□□□ 1.15
LMNA-221ENST00000506981 ANKRD1Q15327 319 aa22.26■■□□□ 1.15
LMNA-221ENST00000506981 STXBP2Q15833 593 aa22.26■■□□□ 1.15
LMNA-221ENST00000506981 TAPT1Q6NXT6 567 aa22.26■■□□□ 1.15
LMNA-221ENST00000506981 ZNF274Q96GC6 653 aaPredicted RBP22.26■■□□□ 1.15
LMNA-221ENST00000506981 SENP6Q9GZR1 1112 aaPredicted RBP22.26■■□□□ 1.15
LMNA-221ENST00000506981 AP5M1Q9H0R1 490 aa22.26■■□□□ 1.15
LMNA-221ENST00000506981 PDGFCQ9NRA1 345 aa22.26■■□□□ 1.15
LMNA-221ENST00000506981 C11orf97A0A1B0GVM6 126 aaPredicted RBP22.25■■□□□ 1.15
LMNA-221ENST00000506981 C6orf222P0C671 652 aaPredicted RBP22.25■■□□□ 1.15
LMNA-221ENST00000506981 COL6A1P12109 1028 aa22.25■■□□□ 1.15
LMNA-221ENST00000506981 NAPAP54920 295 aa22.25■■□□□ 1.15
LMNA-221ENST00000506981 PPP1R18Q6NYC8 613 aa22.25■■□□□ 1.15
LMNA-221ENST00000506981 CPLX2Q6PUV4 134 aaKnown RBP22.25■■□□□ 1.15
LMNA-221ENST00000506981 TLK2Q86UE8 772 aa22.25■■□□□ 1.15
LMNA-221ENST00000506981 SCFD2Q8WU76 684 aa22.25■■□□□ 1.15
LMNA-221ENST00000506981 PSTPIP2Q9H939 334 aa22.25■■□□□ 1.15
LMNA-221ENST00000506981 UPF2Q9HAU5 1272 aaKnown RBP22.25■■□□□ 1.15
LMNA-221ENST00000506981 GTF3C3Q9Y5Q9 886 aa22.25■■□□□ 1.15
LMNA-221ENST00000506981 CPLX1O14810 134 aa22.24■■□□□ 1.15
LMNA-221ENST00000506981 ADCY6O43306 1168 aa22.24■■□□□ 1.15
LMNA-221ENST00000506981 ADAMTS4O75173 837 aa22.24■■□□□ 1.15
LMNA-221ENST00000506981 NR3C2P08235 984 aa22.24■■□□□ 1.15
LMNA-221ENST00000506981 WWC2Q6AWC2 1192 aa22.24■■□□□ 1.15
LMNA-221ENST00000506981 IL17RAQ96F46 866 aa22.24■■□□□ 1.15
LMNA-221ENST00000506981 PDCD2LQ9BRP1 358 aa22.24■■□□□ 1.15
LMNA-221ENST00000506981 WDR11Q9BZH6 1224 aa22.24■■□□□ 1.15
LMNA-221ENST00000506981 UPF3AQ9H1J1 476 aaKnown RBP22.24■■□□□ 1.15
LMNA-221ENST00000506981 PIK3CDO00329 1044 aa22.23■■□□□ 1.15
LMNA-221ENST00000506981 EVI5O60447 810 aa22.23■■□□□ 1.15
LMNA-221ENST00000506981 MYCLP12524 364 aaPredicted RBP22.23■■□□□ 1.15
LMNA-221ENST00000506981 SMPD1P17405 629 aa22.23■■□□□ 1.15
LMNA-221ENST00000506981 CCND2P30279 289 aa22.23■■□□□ 1.15
LMNA-221ENST00000506981 GJA9P57773 515 aa22.23■■□□□ 1.15
LMNA-221ENST00000506981 STK3Q13188 491 aa22.23■■□□□ 1.15
LMNA-221ENST00000506981 TTLL4Q14679 1199 aa22.23■■□□□ 1.15
LMNA-221ENST00000506981 DUSP28Q4G0W2 176 aa22.23■■□□□ 1.15
LMNA-221ENST00000506981 PCSK9Q8NBP7 692 aaKnown RBP22.23■■□□□ 1.15
LMNA-221ENST00000506981 LARP6Q9BRS8 491 aaKnown RBP22.23■■□□□ 1.15
LMNA-221ENST00000506981 TSEN34Q9BSV6 310 aaKnown RBP22.23■■□□□ 1.15
LMNA-221ENST00000506981 ALDH8A1Q9H2A2 487 aaPredicted RBP22.23■■□□□ 1.15
LMNA-221ENST00000506981 NCOA5Q9HCD5 579 aaKnown RBP22.23■■□□□ 1.15
LMNA-221ENST00000506981 NR2E3Q9Y5X4 410 aa22.23■■□□□ 1.15
LMNA-221ENST00000506981 RBM47A0AV96 593 aaKnown RBP22.22■■□□□ 1.15
LMNA-221ENST00000506981 NKRFO15226 690 aaKnown RBP eCLIP22.22■■□□□ 1.15
LMNA-221ENST00000506981 EIF3JO75822 258 aaKnown RBP22.22■■□□□ 1.15
LMNA-221ENST00000506981 SCG2P13521 617 aa22.22■■□□□ 1.15
LMNA-221ENST00000506981 CST5P28325 142 aaPredicted RBP22.22■■□□□ 1.15
LMNA-221ENST00000506981 PGM5Q15124 567 aa22.22■■□□□ 1.15
LMNA-221ENST00000506981 PFKFB3Q16875 520 aaPredicted RBP22.22■■□□□ 1.15
LMNA-221ENST00000506981 USP17L6PQ6QN14 398 aa22.22■■□□□ 1.15
LMNA-221ENST00000506981 SEPT14Q6ZU15 432 aa22.22■■□□□ 1.15
LMNA-221ENST00000506981 TRIM22Q8IYM9 498 aa22.22■■□□□ 1.15
LMNA-221ENST00000506981 CCDC12Q8WUD4 166 aaPredicted RBP22.22■■□□□ 1.15
LMNA-221ENST00000506981 SLC26A6Q9BXS9 759 aa22.22■■□□□ 1.15
LMNA-221ENST00000506981 RNF26Q9BY78 433 aaPredicted RBP22.22■■□□□ 1.15
LMNA-221ENST00000506981 SLKQ9H2G2 1235 aaPredicted RBP22.22■■□□□ 1.15
LMNA-221ENST00000506981 EHMT1Q9H9B1 1298 aa22.22■■□□□ 1.15
LMNA-221ENST00000506981 PHF24Q9UPV7 400 aa22.22■■□□□ 1.15
LMNA-221ENST00000506981 GNEQ9Y223 722 aaKnown RBP22.22■■□□□ 1.15
LMNA-221ENST00000506981 Q9Y3F1 56 aa22.22■■□□□ 1.15
LMNA-221ENST00000506981 MOXD2PA6NHM9 499 aa22.21■■□□□ 1.15
LMNA-221ENST00000506981 DYNC1LI2O43237 492 aaPredicted RBP22.21■■□□□ 1.15
LMNA-221ENST00000506981 PRPF3O43395 683 aaKnown RBP22.21■■□□□ 1.15
LMNA-221ENST00000506981 ZEB2O60315 1214 aa22.21■■□□□ 1.15
LMNA-221ENST00000506981 IFNAR1P17181 557 aa22.21■■□□□ 1.15
LMNA-221ENST00000506981 NEK4P51957 841 aa22.21■■□□□ 1.15
LMNA-221ENST00000506981 AK2P54819 239 aa22.21■■□□□ 1.15
LMNA-221ENST00000506981 GNASQ5JWF2 1037 aa22.21■■□□□ 1.15
LMNA-221ENST00000506981 KLHDC9Q8NEP7 349 aa22.21■■□□□ 1.15
LMNA-221ENST00000506981 PHKBQ93100 1093 aa22.21■■□□□ 1.15
LMNA-221ENST00000506981 FERMT2Q96AC1 680 aa22.21■■□□□ 1.15
LMNA-221ENST00000506981 GLT8D2Q9H1C3 349 aa22.21■■□□□ 1.15
LMNA-221ENST00000506981 BARHL2Q9NY43 387 aa22.21■■□□□ 1.15
LMNA-221ENST00000506981 DOCK5Q9H7D0 1870 aa22.21■■□□□ 1.15
LMNA-221ENST00000506981 SPDYE3A6NKU9 549 aa22.2■■□□□ 1.14
LMNA-221ENST00000506981 STXBP3O00186 592 aa22.2■■□□□ 1.14
LMNA-221ENST00000506981 MEIS2O14770 477 aa22.2■■□□□ 1.14
LMNA-221ENST00000506981 TXNP10599 105 aaKnown RBP22.2■■□□□ 1.14
LMNA-221ENST00000506981 ADCY7P51828 1080 aa22.2■■□□□ 1.14
LMNA-221ENST00000506981 ATN1P54259 1190 aaPredicted RBP22.2■■□□□ 1.14
LMNA-221ENST00000506981 KCNA10Q16322 511 aa22.2■■□□□ 1.14
LMNA-221ENST00000506981 TEX2Q8IWB9 1127 aa22.2■■□□□ 1.14
LMNA-221ENST00000506981 OR6J1Q8NGC5 347 aa22.2■■□□□ 1.14
LMNA-221ENST00000506981 C22orf23Q9BZE7 217 aa22.2■■□□□ 1.14
LMNA-221ENST00000506981 MYADML2A6NDP7 307 aa22.19■■□□□ 1.14
LMNA-221ENST00000506981 CDKL5O76039 1030 aa22.19■■□□□ 1.14
LMNA-221ENST00000506981 ACLYP53396 1101 aa22.19■■□□□ 1.14
LMNA-221ENST00000506981 SSRP1Q08945 709 aaKnown RBP22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms