RNA–Protein interactions for RNA: ENST00000504318.5

PDLIM7-211, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-211ENST00000504318 AMNQ9BXJ7 453 aa16.29■□□□□ 0.2
PDLIM7-211ENST00000504318 TMEM39AQ9NV64 488 aa16.29■□□□□ 0.2
PDLIM7-211ENST00000504318 A6NJR5 290 aa16.28■□□□□ 0.2
PDLIM7-211ENST00000504318 SH2B2O14492 632 aaPredicted RBP16.28■□□□□ 0.2
PDLIM7-211ENST00000504318 PDE4DQ08499 809 aa16.28■□□□□ 0.2
PDLIM7-211ENST00000504318 ITGA7Q13683 1181 aa16.28■□□□□ 0.2
PDLIM7-211ENST00000504318 TMEM67Q5HYA8 995 aa16.28■□□□□ 0.2
PDLIM7-211ENST00000504318 NOL8Q76FK4 1167 aaKnown RBP16.28■□□□□ 0.2
PDLIM7-211ENST00000504318 RALYLQ86SE5 291 aaKnown RBP16.28■□□□□ 0.2
PDLIM7-211ENST00000504318 MCF2L2Q86YR7 1114 aa16.28■□□□□ 0.2
PDLIM7-211ENST00000504318 SCFD2Q8WU76 684 aa16.28■□□□□ 0.2
PDLIM7-211ENST00000504318 AP5M1Q9H0R1 490 aa16.28■□□□□ 0.2
PDLIM7-211ENST00000504318 PXMP2Q9NR77 195 aa16.28■□□□□ 0.2
PDLIM7-211ENST00000504318 MTMR10Q9NXD2 777 aa16.28■□□□□ 0.2
PDLIM7-211ENST00000504318 FRMPD4Q14CM0 1322 aa16.27■□□□□ 0.2
PDLIM7-211ENST00000504318 UMODL1Q5DID0 1318 aa16.27■□□□□ 0.2
PDLIM7-211ENST00000504318 NKRFO15226 690 aaKnown RBP eCLIP16.27■□□□□ 0.2
PDLIM7-211ENST00000504318 B4GALT4O60513 344 aa16.27■□□□□ 0.2
PDLIM7-211ENST00000504318 RAG1P15918 1043 aa16.27■□□□□ 0.2
PDLIM7-211ENST00000504318 RASIP1Q5U651 963 aa16.27■□□□□ 0.2
PDLIM7-211ENST00000504318 FAM109BQ6ICB4 259 aaPredicted RBP16.27■□□□□ 0.2
PDLIM7-211ENST00000504318 MFSD5Q6N075 450 aa16.27■□□□□ 0.2
PDLIM7-211ENST00000504318 ZNF654Q8IZM8 581 aa16.27■□□□□ 0.2
PDLIM7-211ENST00000504318 NSUN6Q8TEA1 469 aaKnown RBP16.27■□□□□ 0.2
PDLIM7-211ENST00000504318 IWS1Q96ST2 819 aa16.27■□□□□ 0.2
PDLIM7-211ENST00000504318 RMDN3Q96TC7 470 aa16.27■□□□□ 0.2
PDLIM7-211ENST00000504318 MYL10Q9BUA6 226 aa16.27■□□□□ 0.2
PDLIM7-211ENST00000504318 MYH7BA7E2Y1 1941 aa16.27■□□□□ 0.19
PDLIM7-211ENST00000504318 PRC1O43663 620 aa16.26■□□□□ 0.19
PDLIM7-211ENST00000504318 DDAH1O94760 285 aa16.26■□□□□ 0.19
PDLIM7-211ENST00000504318 FPGSQ05932 587 aa16.26■□□□□ 0.19
PDLIM7-211ENST00000504318 ARHGAP1Q07960 439 aa16.26■□□□□ 0.19
PDLIM7-211ENST00000504318 PPP2R5BQ15173 497 aa16.26■□□□□ 0.19
PDLIM7-211ENST00000504318 SAMD3Q8N6K7 520 aa16.26■□□□□ 0.19
PDLIM7-211ENST00000504318 OR6J1Q8NGC5 347 aa16.26■□□□□ 0.19
PDLIM7-211ENST00000504318 IL31RAQ8NI17 732 aa16.26■□□□□ 0.19
PDLIM7-211ENST00000504318 PDCD2LQ9BRP1 358 aa16.26■□□□□ 0.19
PDLIM7-211ENST00000504318 SEZ6LQ9BYH1 1024 aa16.26■□□□□ 0.19
PDLIM7-211ENST00000504318 MAP3K20Q9NYL2 800 aaKnown RBP16.26■□□□□ 0.19
PDLIM7-211ENST00000504318 PCDHA1Q9Y5I3 950 aa16.26■□□□□ 0.19
PDLIM7-211ENST00000504318 PNMA6FA0A0J9YX94 578 aa16.25■□□□□ 0.19
PDLIM7-211ENST00000504318 ERICH2A1L162 156 aa16.25■□□□□ 0.19
PDLIM7-211ENST00000504318 DHX16O60231 1041 aaKnown RBP16.25■□□□□ 0.19
PDLIM7-211ENST00000504318 ZEB2O60315 1214 aa16.25■□□□□ 0.19
PDLIM7-211ENST00000504318 CFBP00751 764 aa16.25■□□□□ 0.19
PDLIM7-211ENST00000504318 NR3C2P08235 984 aa16.25■□□□□ 0.19
PDLIM7-211ENST00000504318 TXNP10599 105 aaKnown RBP16.25■□□□□ 0.19
PDLIM7-211ENST00000504318 LIFRP42702 1097 aa16.25■□□□□ 0.19
PDLIM7-211ENST00000504318 SART3Q15020 963 aaKnown RBP16.25■□□□□ 0.19
PDLIM7-211ENST00000504318 LY6KQ17RY6 165 aa16.25■□□□□ 0.19
PDLIM7-211ENST00000504318 TSGA10IPQ3SY00 556 aa16.25■□□□□ 0.19
PDLIM7-211ENST00000504318 RASEFQ8IZ41 740 aa16.25■□□□□ 0.19
PDLIM7-211ENST00000504318 DEFB123Q8N688 67 aa16.25■□□□□ 0.19
PDLIM7-211ENST00000504318 GUCD1Q96NT3 240 aa16.25■□□□□ 0.19
PDLIM7-211ENST00000504318 CTAGE1Q96RT6 745 aa16.25■□□□□ 0.19
PDLIM7-211ENST00000504318 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.25■□□□□ 0.199e-10■■■□□ 15.9
PDLIM7-211ENST00000504318 NOC4LQ9BVI4 516 aaKnown RBP16.25■□□□□ 0.19
PDLIM7-211ENST00000504318 SPZ1Q9BXG8 430 aa16.25■□□□□ 0.19
PDLIM7-211ENST00000504318 TRPV6Q9H1D0 765 aa16.25■□□□□ 0.19
PDLIM7-211ENST00000504318 WNT8AQ9H1J5 351 aa16.25■□□□□ 0.19
PDLIM7-211ENST00000504318 ALDH8A1Q9H2A2 487 aaPredicted RBP16.25■□□□□ 0.19
PDLIM7-211ENST00000504318 ANO2Q9NQ90 1003 aa16.25■□□□□ 0.19
PDLIM7-211ENST00000504318 DDX41Q9UJV9 622 aaKnown RBP16.25■□□□□ 0.19
PDLIM7-211ENST00000504318 TANC1Q9C0D5 1861 aa16.25■□□□□ 0.19
PDLIM7-211ENST00000504318 SCN5AQ14524 2016 aa16.24■□□□□ 0.19
PDLIM7-211ENST00000504318 PLEKHA8P1O95397 391 aa16.24■□□□□ 0.19
PDLIM7-211ENST00000504318 CSF2RAP15509 400 aa16.24■□□□□ 0.19
PDLIM7-211ENST00000504318 EIF2AK2P19525 551 aaKnown RBP16.24■□□□□ 0.19
PDLIM7-211ENST00000504318 SMARCA1P28370 1054 aa16.24■□□□□ 0.19
PDLIM7-211ENST00000504318 HOXA13P31271 388 aaPredicted RBP16.24■□□□□ 0.19
PDLIM7-211ENST00000504318 MCM5P33992 734 aa16.24■□□□□ 0.19
PDLIM7-211ENST00000504318 CPT1AP50416 773 aa16.24■□□□□ 0.19
PDLIM7-211ENST00000504318 TTLL4Q14679 1199 aa16.24■□□□□ 0.19
PDLIM7-211ENST00000504318 PGM5Q15124 567 aa16.24■□□□□ 0.19
PDLIM7-211ENST00000504318 TMEM240Q5SV17 173 aa16.24■□□□□ 0.19
PDLIM7-211ENST00000504318 CATIPQ7Z7H3 387 aa16.24■□□□□ 0.19
PDLIM7-211ENST00000504318 SGMS1Q86VZ5 419 aa16.24■□□□□ 0.19
PDLIM7-211ENST00000504318 HOMER1Q86YM7 354 aa16.24■□□□□ 0.19
PDLIM7-211ENST00000504318 SRBD1Q8N5C6 995 aaKnown RBP16.24■□□□□ 0.19
PDLIM7-211ENST00000504318 KAT2BQ92831 832 aa16.24■□□□□ 0.19
PDLIM7-211ENST00000504318 EMID1Q96A84 441 aaPredicted RBP16.24■□□□□ 0.19
PDLIM7-211ENST00000504318 VTI1AQ96AJ9 217 aa16.24■□□□□ 0.19
PDLIM7-211ENST00000504318 TMEM87BQ96K49 555 aa16.24■□□□□ 0.19
PDLIM7-211ENST00000504318 POLR3EQ9NVU0 708 aa16.24■□□□□ 0.19
PDLIM7-211ENST00000504318 EYSQ5T1H1 3165 aa16.24■□□□□ 0.19
PDLIM7-211ENST00000504318 EIF3JO75822 258 aaKnown RBP16.23■□□□□ 0.19
PDLIM7-211ENST00000504318 MMP3P08254 477 aa16.23■□□□□ 0.19
PDLIM7-211ENST00000504318 HOXD8P13378 290 aaPredicted RBP16.23■□□□□ 0.19
PDLIM7-211ENST00000504318 CYP2C18P33260 490 aa16.23■□□□□ 0.19
PDLIM7-211ENST00000504318 SMAD3P84022 425 aaKnown RBP16.23■□□□□ 0.19
PDLIM7-211ENST00000504318 EXOSC10Q01780 885 aaKnown RBP16.23■□□□□ 0.19
PDLIM7-211ENST00000504318 STXBP2Q15833 593 aa16.23■□□□□ 0.19
PDLIM7-211ENST00000504318 ADCK5Q3MIX3 580 aa16.23■□□□□ 0.19
PDLIM7-211ENST00000504318 SEPT14Q6ZU15 432 aa16.23■□□□□ 0.19
PDLIM7-211ENST00000504318 VSIG10LQ86VR7 867 aa16.23■□□□□ 0.19
PDLIM7-211ENST00000504318 KCNB2Q92953 911 aa16.23■□□□□ 0.19
PDLIM7-211ENST00000504318 MPHOSPH6Q99547 160 aaKnown RBP16.23■□□□□ 0.19
PDLIM7-211ENST00000504318 LRRC2Q9BYS8 371 aa16.23■□□□□ 0.19
PDLIM7-211ENST00000504318 PPP1R12CQ9BZL4 782 aa16.23■□□□□ 0.19
PDLIM7-211ENST00000504318 DOCK5Q9H7D0 1870 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms