RNA–Protein interactions for RNA: ENST00000503942.1

UBE3D-205, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 3

Gene UBE3D, Length 646 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-205ENST00000503942 SMARCC2Q8TAQ2 1214 aa6.79□□□□□ -1.32
UBE3D-205ENST00000503942 CPA5Q8WXQ8 436 aa6.79□□□□□ -1.32
UBE3D-205ENST00000503942 DHRS1Q96LJ7 313 aa6.79□□□□□ -1.32
UBE3D-205ENST00000503942 NOX5Q96PH1 765 aa6.79□□□□□ -1.32
UBE3D-205ENST00000503942 SCAND2PQ9GZW5 306 aaPredicted RBP6.79□□□□□ -1.32
UBE3D-205ENST00000503942 PRKAG3Q9UGI9 489 aa6.79□□□□□ -1.32
UBE3D-205ENST00000503942 C9IYK1 514 aa6.78□□□□□ -1.32
UBE3D-205ENST00000503942 ACRP10323 421 aa6.78□□□□□ -1.32
UBE3D-205ENST00000503942 C6P13671 934 aa6.78□□□□□ -1.32
UBE3D-205ENST00000503942 TBC1D10BQ4KMP7 808 aaPredicted RBP6.78□□□□□ -1.32
UBE3D-205ENST00000503942 ANKS3Q6ZW76 656 aa6.78□□□□□ -1.32
UBE3D-205ENST00000503942 OR6P1Q8NGX9 317 aa6.78□□□□□ -1.32
UBE3D-205ENST00000503942 PTCHD1Q96NR3 888 aa6.78□□□□□ -1.32
UBE3D-205ENST00000503942 CRBNQ96SW2 442 aa6.78□□□□□ -1.32
UBE3D-205ENST00000503942 HIRIP3Q9BW71 556 aaPredicted RBP6.78□□□□□ -1.32
UBE3D-205ENST00000503942 TACR2P21452 398 aa6.77□□□□□ -1.33
UBE3D-205ENST00000503942 L1CAMP32004 1257 aa6.77□□□□□ -1.33
UBE3D-205ENST00000503942 CCDC144CPQ8IYA2 1237 aa6.77□□□□□ -1.33
UBE3D-205ENST00000503942 ADAMTS17Q8TE56 1095 aa6.77□□□□□ -1.33
UBE3D-205ENST00000503942 HNRNPLLQ8WVV9 542 aaKnown RBP6.77□□□□□ -1.33
UBE3D-205ENST00000503942 BCAS3Q9H6U6 928 aa6.77□□□□□ -1.33
UBE3D-205ENST00000503942 TBC1D8O95759 1140 aa6.76□□□□□ -1.33
UBE3D-205ENST00000503942 NOP2P46087 812 aaKnown RBP6.76□□□□□ -1.33
UBE3D-205ENST00000503942 HMGA2P52926 109 aa6.76□□□□□ -1.33
UBE3D-205ENST00000503942 CASP7P55210 303 aa6.76□□□□□ -1.33
UBE3D-205ENST00000503942 ZNF445P59923 1031 aa6.76□□□□□ -1.33
UBE3D-205ENST00000503942 TTLL7Q6ZT98 887 aa6.76□□□□□ -1.33
UBE3D-205ENST00000503942 DPH6Q7L8W6 267 aa6.76□□□□□ -1.33
UBE3D-205ENST00000503942 PMFBP1Q8TBY8 1022 aa6.76□□□□□ -1.33
UBE3D-205ENST00000503942 DVL3Q92997 716 aaPredicted RBP6.76□□□□□ -1.33
UBE3D-205ENST00000503942 FCRL3Q96P31 734 aaPredicted RBP6.76□□□□□ -1.33
UBE3D-205ENST00000503942 FHOD1Q9Y613 1164 aa6.76□□□□□ -1.33
UBE3D-205ENST00000503942 A0A1W2PQH9 124 aa6.75□□□□□ -1.33
UBE3D-205ENST00000503942 LOC105371045A0A1W2PR82 267 aa6.75□□□□□ -1.33
UBE3D-205ENST00000503942 GUCY2CP25092 1073 aa6.75□□□□□ -1.33
UBE3D-205ENST00000503942 GDF5P43026 501 aa6.75□□□□□ -1.33
UBE3D-205ENST00000503942 PMS1P54277 932 aaKnown RBP6.75□□□□□ -1.33
UBE3D-205ENST00000503942 CACNB2Q08289 660 aaPredicted RBP6.75□□□□□ -1.33
UBE3D-205ENST00000503942 SERINC3Q13530 473 aa6.75□□□□□ -1.33
UBE3D-205ENST00000503942 ZYXQ15942 572 aaKnown RBP6.75□□□□□ -1.33
UBE3D-205ENST00000503942 INTS3Q68E01 1043 aaKnown RBP6.75□□□□□ -1.33
UBE3D-205ENST00000503942 CABP7Q86V35 215 aa6.75□□□□□ -1.33
UBE3D-205ENST00000503942 CKAP2LQ8IYA6 745 aa6.75□□□□□ -1.33
UBE3D-205ENST00000503942 TAB3Q8N5C8 712 aaPredicted RBP6.75□□□□□ -1.33
UBE3D-205ENST00000503942 LINC00482Q8N8I6 264 aa6.75□□□□□ -1.33
UBE3D-205ENST00000503942 C19orf47Q8N9M1 422 aaKnown RBP6.75□□□□□ -1.33
UBE3D-205ENST00000503942 ZBTB8AQ96BR9 441 aa6.75□□□□□ -1.33
UBE3D-205ENST00000503942 TM9SF2Q99805 663 aa6.75□□□□□ -1.33
UBE3D-205ENST00000503942 RXFP1Q9HBX9 757 aa6.75□□□□□ -1.33
UBE3D-205ENST00000503942 GP6Q9HCN6 339 aa6.75□□□□□ -1.33
UBE3D-205ENST00000503942 SLPIP03973 132 aa6.74□□□□□ -1.33
UBE3D-205ENST00000503942 IFNGR1P15260 489 aa6.74□□□□□ -1.33
UBE3D-205ENST00000503942 RAB33AQ14088 237 aa6.74□□□□□ -1.33
UBE3D-205ENST00000503942 SLC9A5Q14940 896 aa6.74□□□□□ -1.33
UBE3D-205ENST00000503942 ANKRD39Q53RE8 183 aa6.74□□□□□ -1.33
UBE3D-205ENST00000503942 TNNI3KQ59H18 835 aa6.74□□□□□ -1.33
UBE3D-205ENST00000503942 NOL9Q5SY16 702 aaKnown RBP6.74□□□□□ -1.33
UBE3D-205ENST00000503942 NBPF6Q5VWK0 638 aa6.74□□□□□ -1.33
UBE3D-205ENST00000503942 Q8N1X5 172 aa6.74□□□□□ -1.33
UBE3D-205ENST00000503942 FIBCD1Q8N539 461 aa6.74□□□□□ -1.33
UBE3D-205ENST00000503942 SMARCC1Q92922 1105 aaPredicted RBP6.74□□□□□ -1.33
UBE3D-205ENST00000503942 PEX11GQ96HA9 241 aa6.74□□□□□ -1.33
UBE3D-205ENST00000503942 NBPF4Q96M43 638 aa6.74□□□□□ -1.33
UBE3D-205ENST00000503942 SSBP3Q9BWW4 388 aaPredicted RBP6.74□□□□□ -1.33
UBE3D-205ENST00000503942 FBLN5Q9UBX5 448 aa6.74□□□□□ -1.33
UBE3D-205ENST00000503942 FAM86C2PA6NEL3 165 aa6.73□□□□□ -1.33
UBE3D-205ENST00000503942 CCDC144BQ3MJ40 725 aa6.73□□□□□ -1.33
UBE3D-205ENST00000503942 SOGA3Q5TF21 947 aa6.73□□□□□ -1.33
UBE3D-205ENST00000503942 TDRD10Q5VZ19 366 aaKnown RBP6.73□□□□□ -1.33
UBE3D-205ENST00000503942 DCAF15Q66K64 600 aa6.73□□□□□ -1.33
UBE3D-205ENST00000503942 UNC5AQ6ZN44 842 aa6.73□□□□□ -1.33
UBE3D-205ENST00000503942 PPFIBP1Q86W92 1011 aa6.73□□□□□ -1.33
UBE3D-205ENST00000503942 CELF2-AS1Q8N7Q2 184 aa6.73□□□□□ -1.33
UBE3D-205ENST00000503942 NETO2Q8NC67 525 aa6.73□□□□□ -1.33
UBE3D-205ENST00000503942 CHST13Q8NET6 341 aa6.73□□□□□ -1.33
UBE3D-205ENST00000503942 MICAL1Q8TDZ2 1067 aa6.73□□□□□ -1.33
UBE3D-205ENST00000503942 BRF1Q92994 677 aa6.73□□□□□ -1.33
UBE3D-205ENST00000503942 ACTR10Q9NZ32 417 aa6.73□□□□□ -1.33
UBE3D-205ENST00000503942 NUDT5Q9UKK9 219 aa6.73□□□□□ -1.33
UBE3D-205ENST00000503942 LTBP3Q9NS15 1303 aa6.73□□□□□ -1.33
UBE3D-205ENST00000503942 CYR61O00622 381 aa6.72□□□□□ -1.33
UBE3D-205ENST00000503942 CD3EP07766 207 aa6.72□□□□□ -1.33
UBE3D-205ENST00000503942 ACVRL1P37023 503 aa6.72□□□□□ -1.33
UBE3D-205ENST00000503942 SMAD4Q13485 552 aaKnown RBP6.72□□□□□ -1.33
UBE3D-205ENST00000503942 PPP2R5EQ16537 467 aa6.72□□□□□ -1.33
UBE3D-205ENST00000503942 RGL3Q3MIN7 710 aa6.72□□□□□ -1.33
UBE3D-205ENST00000503942 CRIP3Q6Q6R5 217 aa6.72□□□□□ -1.33
UBE3D-205ENST00000503942 SPRED1Q7Z699 444 aa6.72□□□□□ -1.33
UBE3D-205ENST00000503942 LGI4Q8N135 537 aa6.72□□□□□ -1.33
UBE3D-205ENST00000503942 MENTQ9BUN1 341 aa6.72□□□□□ -1.33
UBE3D-205ENST00000503942 MRIQ9BWK5 157 aa6.72□□□□□ -1.33
UBE3D-205ENST00000503942 INVSQ9Y283 1065 aa6.72□□□□□ -1.33
UBE3D-205ENST00000503942 SF3B6Q9Y3B4 125 aaKnown RBP6.72□□□□□ -1.33
UBE3D-205ENST00000503942 SMARCA5O60264 1052 aaPredicted RBP6.71□□□□□ -1.34
UBE3D-205ENST00000503942 KIAA2012Q0VF49 1180 aa6.71□□□□□ -1.34
UBE3D-205ENST00000503942 FAM26FQ5R3K3 315 aa6.71□□□□□ -1.34
UBE3D-205ENST00000503942 AXDND1Q5T1B0 1012 aaPredicted RBP6.71□□□□□ -1.34
UBE3D-205ENST00000503942 RCSD1Q6JBY9 416 aa6.71□□□□□ -1.34
UBE3D-205ENST00000503942 LZTR1Q8N653 840 aa6.71□□□□□ -1.34
UBE3D-205ENST00000503942 SH3RF3Q8TEJ3 882 aaPredicted RBP6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms