RNA–Protein interactions for RNA: ENST00000498653.5

FXN-205, Transcript of frataxin, humanhuman

TSL 1 (best) BASIC

Gene FXN, Length 856 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-205ENST00000498653 SPEM2Q0P670 501 aa6.54□□□□□ -1.36
FXN-205ENST00000498653 TCTN1Q2MV58 587 aa6.54□□□□□ -1.36
FXN-205ENST00000498653 PCSK9Q8NBP7 692 aaKnown RBP6.54□□□□□ -1.36
FXN-205ENST00000498653 VTI1AQ96AJ9 217 aa6.54□□□□□ -1.36
FXN-205ENST00000498653 MRIQ9BWK5 157 aa6.54□□□□□ -1.36
FXN-205ENST00000498653 UPF3AQ9H1J1 476 aaKnown RBP6.54□□□□□ -1.36
FXN-205ENST00000498653 IGFLR1Q9H665 355 aa6.54□□□□□ -1.36
FXN-205ENST00000498653 ERVK-5Q9HDB9 667 aa6.54□□□□□ -1.36
FXN-205ENST00000498653 DLGAP2Q9P1A6 1054 aa6.54□□□□□ -1.36
FXN-205ENST00000498653 BARX2Q9UMQ3 279 aaPredicted RBP6.54□□□□□ -1.36
FXN-205ENST00000498653 SIPA1L1O43166 1804 aa6.54□□□□□ -1.36
FXN-205ENST00000498653 MAPK8IP3Q9UPT6 1336 aa6.53□□□□□ -1.36
FXN-205ENST00000498653 SHROOM3Q8TF72 1996 aa6.53□□□□□ -1.36
FXN-205ENST00000498653 SETD2Q9BYW2 2564 aaPredicted RBP6.53□□□□□ -1.36
FXN-205ENST00000498653 DDTLA6NHG4 134 aaPredicted RBP6.53□□□□□ -1.36
FXN-205ENST00000498653 FAM196BA6NMK8 535 aa6.53□□□□□ -1.36
FXN-205ENST00000498653 U2SURPO15042 1029 aaKnown RBP6.53□□□□□ -1.36
FXN-205ENST00000498653 HOXA2O43364 376 aa6.53□□□□□ -1.36
FXN-205ENST00000498653 C6orf222P0C671 652 aaPredicted RBP6.53□□□□□ -1.36
FXN-205ENST00000498653 CYP2C9P11712 490 aa6.53□□□□□ -1.36
FXN-205ENST00000498653 PRKAR2BP31323 418 aa6.53□□□□□ -1.36
FXN-205ENST00000498653 IGHMBP2P38935 993 aaKnown RBP6.53□□□□□ -1.36
FXN-205ENST00000498653 FOXC1Q12948 553 aa6.53□□□□□ -1.36
FXN-205ENST00000498653 HHIPL2Q6UWX4 724 aa6.53□□□□□ -1.36
FXN-205ENST00000498653 FAM9BQ8IZU0 186 aa6.53□□□□□ -1.36
FXN-205ENST00000498653 SHCBP1Q8NEM2 672 aa6.53□□□□□ -1.36
FXN-205ENST00000498653 PNISRQ8TF01 805 aaKnown RBP6.53□□□□□ -1.36
FXN-205ENST00000498653 SAMD11Q96NU1 681 aa6.53□□□□□ -1.36
FXN-205ENST00000498653 GOPCQ9HD26 462 aa6.53□□□□□ -1.36
FXN-205ENST00000498653 PTPRQQ9UMZ3 2332 aa6.53□□□□□ -1.36
FXN-205ENST00000498653 RALGAPA1Q6GYQ0 2036 aa6.52□□□□□ -1.37
FXN-205ENST00000498653 USP17L5A8MUK1 530 aa6.52□□□□□ -1.37
FXN-205ENST00000498653 HTATSF1O43719 755 aaKnown RBP6.52□□□□□ -1.37
FXN-205ENST00000498653 DUSP11O75319 330 aaKnown RBP6.52□□□□□ -1.37
FXN-205ENST00000498653 KCNK5O95279 499 aa6.52□□□□□ -1.37
FXN-205ENST00000498653 ASGR2P07307 311 aa6.52□□□□□ -1.37
FXN-205ENST00000498653 HTRA4P83105 476 aaPredicted RBP6.52□□□□□ -1.37
FXN-205ENST00000498653 ITGA7Q13683 1181 aa6.52□□□□□ -1.37
FXN-205ENST00000498653 TMEM132AQ24JP5 1023 aa6.52□□□□□ -1.37
FXN-205ENST00000498653 KRTAP21-3Q3LHN1 58 aa6.52□□□□□ -1.37
FXN-205ENST00000498653 MYSM1Q5VVJ2 828 aa6.52□□□□□ -1.37
FXN-205ENST00000498653 LBX2Q6XYB7 198 aa6.52□□□□□ -1.37
FXN-205ENST00000498653 PRR23CQ6ZRP0 262 aa6.52□□□□□ -1.37
FXN-205ENST00000498653 FBXO11Q86XK2 927 aa6.52□□□□□ -1.37
FXN-205ENST00000498653 C1orf210Q8IVY1 113 aa6.52□□□□□ -1.37
FXN-205ENST00000498653 ZNF843Q8N446 348 aa6.52□□□□□ -1.37
FXN-205ENST00000498653 EFHBQ8N7U6 833 aa6.52□□□□□ -1.37
FXN-205ENST00000498653 PCMTD1Q96MG8 357 aaPredicted RBP6.52□□□□□ -1.37
FXN-205ENST00000498653 WDR18Q9BV38 432 aa6.52□□□□□ -1.37
FXN-205ENST00000498653 SCNM1Q9BWG6 230 aa6.52□□□□□ -1.37
FXN-205ENST00000498653 FTOQ9C0B1 505 aaKnown RBP eCLIP6.52□□□□□ -1.37
FXN-205ENST00000498653 OSBPL5Q9H0X9 879 aaPredicted RBP6.52□□□□□ -1.37
FXN-205ENST00000498653 IL21Q9HBE4 155 aa6.52□□□□□ -1.37
FXN-205ENST00000498653 TMOD4Q9NZQ9 345 aa6.52□□□□□ -1.37
FXN-205ENST00000498653 MROH5Q6ZUA9 1318 aa6.51□□□□□ -1.37
FXN-205ENST00000498653 MCM3APO60318 1980 aa6.51□□□□□ -1.37
FXN-205ENST00000498653 C2CD4DB7Z1M9 353 aa6.51□□□□□ -1.37
FXN-205ENST00000498653 PYCARD-AS1I3L0S3 204 aa6.51□□□□□ -1.37
FXN-205ENST00000498653 GRM6O15303 877 aa6.51□□□□□ -1.37
FXN-205ENST00000498653 STRNO43815 780 aa6.51□□□□□ -1.37
FXN-205ENST00000498653 LILRB5O75023 590 aa6.51□□□□□ -1.37
FXN-205ENST00000498653 IQCF3P0C7M6 154 aa6.51□□□□□ -1.37
FXN-205ENST00000498653 FDX1P10109 184 aa6.51□□□□□ -1.37
FXN-205ENST00000498653 GYG1P46976 350 aa6.51□□□□□ -1.37
FXN-205ENST00000498653 CLK2P49760 499 aaKnown RBP6.51□□□□□ -1.37
FXN-205ENST00000498653 RGS3P49796 1198 aa6.51□□□□□ -1.37
FXN-205ENST00000498653 GJA9P57773 515 aa6.51□□□□□ -1.37
FXN-205ENST00000498653 COPS2P61201 443 aa6.51□□□□□ -1.37
FXN-205ENST00000498653 GPNMBQ14956 572 aa6.51□□□□□ -1.37
FXN-205ENST00000498653 IL31Q6EBC2 164 aa6.51□□□□□ -1.37
FXN-205ENST00000498653 CXCL17Q6UXB2 119 aa6.51□□□□□ -1.37
FXN-205ENST00000498653 ADGRD2Q7Z7M1 963 aa6.51□□□□□ -1.37
FXN-205ENST00000498653 CRBNQ96SW2 442 aa6.51□□□□□ -1.37
FXN-205ENST00000498653 MTRQ99707 1265 aa6.51□□□□□ -1.37
FXN-205ENST00000498653 TINF2Q9BSI4 451 aa6.51□□□□□ -1.37
FXN-205ENST00000498653 MOV10L1Q9BXT6 1211 aaKnown RBP6.51□□□□□ -1.37
FXN-205ENST00000498653 ALDH8A1Q9H2A2 487 aaPredicted RBP6.51□□□□□ -1.37
FXN-205ENST00000498653 PNNQ9H307 717 aaKnown RBP6.51□□□□□ -1.37
FXN-205ENST00000498653 TRMT13Q9NUP7 481 aaKnown RBP6.51□□□□□ -1.37
FXN-205ENST00000498653 GMEB2Q9UKD1 530 aa6.51□□□□□ -1.37
FXN-205ENST00000498653 ADAMTS8Q9UP79 889 aa6.51□□□□□ -1.37
FXN-205ENST00000498653 APC2O95996 2303 aa6.51□□□□□ -1.37
FXN-205ENST00000498653 TRIP12Q14669 1992 aaPredicted RBP6.51□□□□□ -1.37
FXN-205ENST00000498653 NAV3Q8IVL0 2385 aa6.51□□□□□ -1.37
FXN-205ENST00000498653 ATMQ13315 3056 aa6.51□□□□□ -1.37
FXN-205ENST00000498653 MYH13Q9UKX3 1938 aa6.5□□□□□ -1.37
FXN-205ENST00000498653 ACACAQ13085 2346 aa6.5□□□□□ -1.37
FXN-205ENST00000498653 MAFO75444 373 aaPredicted RBP6.5□□□□□ -1.37
FXN-205ENST00000498653 NEFMP07197 916 aa6.5□□□□□ -1.37
FXN-205ENST00000498653 LINC00271P0C7V0 271 aa6.5□□□□□ -1.37
FXN-205ENST00000498653 CAP2P40123 477 aa6.5□□□□□ -1.37
FXN-205ENST00000498653 NKX3-2P78367 333 aa6.5□□□□□ -1.37
FXN-205ENST00000498653 CAMK1Q14012 370 aa6.5□□□□□ -1.37
FXN-205ENST00000498653 PSAPL1Q6NUJ1 521 aa6.5□□□□□ -1.37
FXN-205ENST00000498653 BLOC1S3Q6QNY0 202 aa6.5□□□□□ -1.37
FXN-205ENST00000498653 TMEM192Q8IY95 271 aa6.5□□□□□ -1.37
FXN-205ENST00000498653 SIX5Q8N196 739 aa6.5□□□□□ -1.37
FXN-205ENST00000498653 ZBTB44Q8NCP5 570 aa6.5□□□□□ -1.37
FXN-205ENST00000498653 BORCS6Q96GS4 357 aa6.5□□□□□ -1.37
FXN-205ENST00000498653 LMAN2LQ9H0V9 348 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms