RNA–Protein interactions for RNA: ENST00000498548.1

NR1H3-227, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 3

Gene NR1H3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-227ENST00000498548 NFXL1Q6ZNB6 911 aa18.71■□□□□ 0.59
NR1H3-227ENST00000498548 SEPT14Q6ZU15 432 aa18.71■□□□□ 0.59
NR1H3-227ENST00000498548 ZNF654Q8IZM8 581 aa18.71■□□□□ 0.59
NR1H3-227ENST00000498548 RMDN3Q96TC7 470 aa18.71■□□□□ 0.59
NR1H3-227ENST00000498548 GRIN2DO15399 1336 aa18.71■□□□□ 0.59
NR1H3-227ENST00000498548 B4DLN1 442 aa18.7■□□□□ 0.58
NR1H3-227ENST00000498548 CDC45O75419 566 aa18.7■□□□□ 0.58
NR1H3-227ENST00000498548 MYL3P08590 195 aa18.7■□□□□ 0.58
NR1H3-227ENST00000498548 TXNP10599 105 aaKnown RBP18.7■□□□□ 0.58
NR1H3-227ENST00000498548 HOXA13P31271 388 aaPredicted RBP18.7■□□□□ 0.58
NR1H3-227ENST00000498548 MRPL12P52815 198 aaKnown RBP18.7■□□□□ 0.58
NR1H3-227ENST00000498548 EPHB4P54760 987 aa18.7■□□□□ 0.58
NR1H3-227ENST00000498548 ITGA7Q13683 1181 aa18.7■□□□□ 0.58
NR1H3-227ENST00000498548 PPP2R5BQ15173 497 aa18.7■□□□□ 0.58
NR1H3-227ENST00000498548 ARHGEF16Q5VV41 709 aa18.7■□□□□ 0.58
NR1H3-227ENST00000498548 NSUN6Q8TEA1 469 aaKnown RBP18.7■□□□□ 0.58
NR1H3-227ENST00000498548 PPP1R13LQ8WUF5 828 aa18.7■□□□□ 0.58
NR1H3-227ENST00000498548 SZT2Q5T011 3432 aa18.7■□□□□ 0.58
NR1H3-227ENST00000498548 KIAA1217Q5T5P2 1943 aa18.69■□□□□ 0.58
NR1H3-227ENST00000498548 PNMA6FA0A0J9YX94 578 aa18.69■□□□□ 0.58
NR1H3-227ENST00000498548 CCDC69A6NI79 296 aa18.69■□□□□ 0.58
NR1H3-227ENST00000498548 HSD17B4P51659 736 aa18.69■□□□□ 0.58
NR1H3-227ENST00000498548 LY6KQ17RY6 165 aa18.69■□□□□ 0.58
NR1H3-227ENST00000498548 FAM126BQ8IXS8 530 aa18.69■□□□□ 0.58
NR1H3-227ENST00000498548 CMTR1Q8N1G2 835 aaKnown RBP18.69■□□□□ 0.58
NR1H3-227ENST00000498548 SCFD2Q8WU76 684 aa18.69■□□□□ 0.58
NR1H3-227ENST00000498548 ZFP91Q96JP5 570 aaPredicted RBP18.69■□□□□ 0.58
NR1H3-227ENST00000498548 TMEM87BQ96K49 555 aa18.69■□□□□ 0.58
NR1H3-227ENST00000498548 PXMP2Q9NR77 195 aa18.69■□□□□ 0.58
NR1H3-227ENST00000498548 CABYRO75952 493 aa18.68■□□□□ 0.58
NR1H3-227ENST00000498548 PLEKHA8P1O95397 391 aa18.68■□□□□ 0.58
NR1H3-227ENST00000498548 MYCLP12524 364 aaPredicted RBP18.68■□□□□ 0.58
NR1H3-227ENST00000498548 STXBP2Q15833 593 aa18.68■□□□□ 0.58
NR1H3-227ENST00000498548 Q7L0L9 218 aa18.68■□□□□ 0.58
NR1H3-227ENST00000498548 SLC43A3Q8NBI5 491 aa18.68■□□□□ 0.58
NR1H3-227ENST00000498548 CTCFLQ8NI51 663 aaPredicted RBP18.68■□□□□ 0.58
NR1H3-227ENST00000498548 TCEANC2Q96MN5 208 aa18.68■□□□□ 0.58
NR1H3-227ENST00000498548 PPP1R12CQ9BZL4 782 aa18.68■□□□□ 0.58
NR1H3-227ENST00000498548 MAF1Q9H063 256 aa18.68■□□□□ 0.58
NR1H3-227ENST00000498548 TBX21Q9UL17 535 aa18.68■□□□□ 0.58
NR1H3-227ENST00000498548 MYH7BA7E2Y1 1941 aa18.68■□□□□ 0.58
NR1H3-227ENST00000498548 MROH7Q68CQ1 1323 aa18.68■□□□□ 0.58
NR1H3-227ENST00000498548 TLR3O15455 904 aaKnown RBP18.67■□□□□ 0.58
NR1H3-227ENST00000498548 DDAH1O94760 285 aa18.67■□□□□ 0.58
NR1H3-227ENST00000498548 TIMP1P01033 207 aa18.67■□□□□ 0.58
NR1H3-227ENST00000498548 CD4P01730 458 aa18.67■□□□□ 0.58
NR1H3-227ENST00000498548 NR3C2P08235 984 aa18.67■□□□□ 0.58
NR1H3-227ENST00000498548 TTLL4Q14679 1199 aa18.67■□□□□ 0.58
NR1H3-227ENST00000498548 FCHSD1Q86WN1 690 aa18.67■□□□□ 0.58
NR1H3-227ENST00000498548 RASEFQ8IZ41 740 aa18.67■□□□□ 0.58
NR1H3-227ENST00000498548 SRBD1Q8N5C6 995 aaKnown RBP18.67■□□□□ 0.58
NR1H3-227ENST00000498548 IWS1Q96ST2 819 aa18.67■□□□□ 0.58
NR1H3-227ENST00000498548 TRPV6Q9H1D0 765 aa18.67■□□□□ 0.58
NR1H3-227ENST00000498548 NKRFO15226 690 aaKnown RBP eCLIP18.66■□□□□ 0.58
NR1H3-227ENST00000498548 CPT1AP50416 773 aa18.66■□□□□ 0.58
NR1H3-227ENST00000498548 PURAQ00577 322 aaKnown RBP18.66■□□□□ 0.58
NR1H3-227ENST00000498548 ADCK5Q3MIX3 580 aa18.66■□□□□ 0.58
NR1H3-227ENST00000498548 RNF20Q5VTR2 975 aa18.66■□□□□ 0.58
NR1H3-227ENST00000498548 CCDC62Q6P9F0 684 aa18.66■□□□□ 0.58
NR1H3-227ENST00000498548 TMTC2Q8N394 836 aa18.66■□□□□ 0.58
NR1H3-227ENST00000498548 NEK1Q96PY6 1258 aa18.66■□□□□ 0.58
NR1H3-227ENST00000498548 MAP3K14Q99558 947 aa18.66■□□□□ 0.58
NR1H3-227ENST00000498548 MTA3Q9BTC8 594 aa18.66■□□□□ 0.58
NR1H3-227ENST00000498548 POLR3EQ9NVU0 708 aa18.66■□□□□ 0.58
NR1H3-227ENST00000498548 hCG_1642624A0A1W2PR95 340 aa18.65■□□□□ 0.58
NR1H3-227ENST00000498548 GCOM1H8Y6P7 765 aaPredicted RBP18.65■□□□□ 0.58
NR1H3-227ENST00000498548 SORBS3O60504 671 aa18.65■□□□□ 0.58
NR1H3-227ENST00000498548 B4GALT4O60513 344 aa18.65■□□□□ 0.58
NR1H3-227ENST00000498548 POLR2MP0CAP2 368 aa18.65■□□□□ 0.58
NR1H3-227ENST00000498548 KIF5BP33176 963 aa18.65■□□□□ 0.58
NR1H3-227ENST00000498548 CYP2C18P33260 490 aa18.65■□□□□ 0.58
NR1H3-227ENST00000498548 LIFRP42702 1097 aa18.65■□□□□ 0.58
NR1H3-227ENST00000498548 CHMP4BP1P59074 171 aa18.65■□□□□ 0.58
NR1H3-227ENST00000498548 GHRHRQ02643 423 aa18.65■□□□□ 0.58
NR1H3-227ENST00000498548 FPGSQ05932 587 aa18.65■□□□□ 0.58
NR1H3-227ENST00000498548 CCDC82Q8N4S0 544 aa18.65■□□□□ 0.58
NR1H3-227ENST00000498548 IL31RAQ8NI17 732 aa18.65■□□□□ 0.58
NR1H3-227ENST00000498548 PDCD2LQ9BRP1 358 aa18.65■□□□□ 0.58
NR1H3-227ENST00000498548 SLC12A7Q9Y666 1083 aa18.65■□□□□ 0.58
NR1H3-227ENST00000498548 LAMA3Q16787 3333 aa18.64■□□□□ 0.58
NR1H3-227ENST00000498548 EIF3JO75822 258 aaKnown RBP18.64■□□□□ 0.57
NR1H3-227ENST00000498548 NEFLP07196 543 aa18.64■□□□□ 0.57
NR1H3-227ENST00000498548 PGM5Q15124 567 aa18.64■□□□□ 0.57
NR1H3-227ENST00000498548 AFG1LQ8WV93 481 aa18.64■□□□□ 0.57
NR1H3-227ENST00000498548 RRP36Q96EU6 259 aaKnown RBP18.64■□□□□ 0.57
NR1H3-227ENST00000498548 MTG1Q9BT17 334 aaPredicted RBP18.64■□□□□ 0.57
NR1H3-227ENST00000498548 SPZ1Q9BXG8 430 aa18.64■□□□□ 0.57
NR1H3-227ENST00000498548 UMODL1Q5DID0 1318 aa18.64■□□□□ 0.57
NR1H3-227ENST00000498548 A6NJR5 290 aa18.63■□□□□ 0.57
NR1H3-227ENST00000498548 GH1P01241 217 aa18.63■□□□□ 0.57
NR1H3-227ENST00000498548 ACRP10323 421 aa18.63■□□□□ 0.57
NR1H3-227ENST00000498548 CPA1P15085 419 aa18.63■□□□□ 0.57
NR1H3-227ENST00000498548 EXOSC10Q01780 885 aaKnown RBP18.63■□□□□ 0.57
NR1H3-227ENST00000498548 ARHGAP1Q07960 439 aa18.63■□□□□ 0.57
NR1H3-227ENST00000498548 TRAF1Q13077 416 aa18.63■□□□□ 0.57
NR1H3-227ENST00000498548 NBPF20Q3BBV1 942 aa18.63■□□□□ 0.57
NR1H3-227ENST00000498548 FAM47CQ5HY64 1035 aa18.63■□□□□ 0.57
NR1H3-227ENST00000498548 MFSD5Q6N075 450 aa18.63■□□□□ 0.57
NR1H3-227ENST00000498548 MICU3Q86XE3 530 aa18.63■□□□□ 0.57
NR1H3-227ENST00000498548 DEFB123Q8N688 67 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms