RNA–Protein interactions for RNA: ENST00000497758.1

MRPL55-234, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 470 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-234ENST00000497758 GPKOWQ92917 476 aaPredicted RBP eCLIP13.53□□□□□ -0.24
MRPL55-234ENST00000497758 PSTPIP2Q9H939 334 aa13.53□□□□□ -0.24
MRPL55-234ENST00000497758 PXMP2Q9NR77 195 aa13.53□□□□□ -0.24
MRPL55-234ENST00000497758 FAM217BQ9NTX9 383 aaPredicted RBP13.53□□□□□ -0.24
MRPL55-234ENST00000497758 RBM27Q9P2N5 1060 aaKnown RBP13.53□□□□□ -0.24
MRPL55-234ENST00000497758 CPLX1O14810 134 aa13.52□□□□□ -0.25
MRPL55-234ENST00000497758 C6orf222P0C671 652 aaPredicted RBP13.52□□□□□ -0.25
MRPL55-234ENST00000497758 NAPAP54920 295 aa13.52□□□□□ -0.25
MRPL55-234ENST00000497758 EVCP57679 992 aa13.52□□□□□ -0.25
MRPL55-234ENST00000497758 CCT2P78371 535 aaKnown RBP13.52□□□□□ -0.25
MRPL55-234ENST00000497758 FUT2Q10981 343 aa13.52□□□□□ -0.25
MRPL55-234ENST00000497758 ANKRD1Q15327 319 aa13.52□□□□□ -0.25
MRPL55-234ENST00000497758 STXBP2Q15833 593 aa13.52□□□□□ -0.25
MRPL55-234ENST00000497758 SCFD2Q8WU76 684 aa13.52□□□□□ -0.25
MRPL55-234ENST00000497758 LARP6Q9BRS8 491 aaKnown RBP13.52□□□□□ -0.25
MRPL55-234ENST00000497758 SENP6Q9GZR1 1112 aaPredicted RBP13.52□□□□□ -0.25
MRPL55-234ENST00000497758 AP5M1Q9H0R1 490 aa13.52□□□□□ -0.25
MRPL55-234ENST00000497758 UPF2Q9HAU5 1272 aaKnown RBP13.52□□□□□ -0.25
MRPL55-234ENST00000497758 PDGFCQ9NRA1 345 aa13.52□□□□□ -0.25
MRPL55-234ENST00000497758 SYNRGQ9UMZ2 1314 aa13.52□□□□□ -0.25
MRPL55-234ENST00000497758 NID2Q14112 1375 aa13.52□□□□□ -0.25
MRPL55-234ENST00000497758 LCTP09848 1927 aa13.52□□□□□ -0.25
MRPL55-234ENST00000497758 CEP290O15078 2479 aa13.51□□□□□ -0.25
MRPL55-234ENST00000497758 FRMPD3Q5JV73 1810 aa13.51□□□□□ -0.25
MRPL55-234ENST00000497758 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.51□□□□□ -0.25
MRPL55-234ENST00000497758 hCG_1984214I3L0E3 225 aa13.51□□□□□ -0.25
MRPL55-234ENST00000497758 EVI5O60447 810 aa13.51□□□□□ -0.25
MRPL55-234ENST00000497758 NR3C2P08235 984 aa13.51□□□□□ -0.25
MRPL55-234ENST00000497758 STK3Q13188 491 aa13.51□□□□□ -0.25
MRPL55-234ENST00000497758 WWC2Q6AWC2 1192 aa13.51□□□□□ -0.25
MRPL55-234ENST00000497758 TAPT1Q6NXT6 567 aa13.51□□□□□ -0.25
MRPL55-234ENST00000497758 PPP1R18Q6NYC8 613 aa13.51□□□□□ -0.25
MRPL55-234ENST00000497758 CPLX2Q6PUV4 134 aaKnown RBP13.51□□□□□ -0.25
MRPL55-234ENST00000497758 TLK2Q86UE8 772 aa13.51□□□□□ -0.25
MRPL55-234ENST00000497758 ZNF713Q8N859 430 aaPredicted RBP13.51□□□□□ -0.25
MRPL55-234ENST00000497758 ZNF274Q96GC6 653 aaPredicted RBP13.51□□□□□ -0.25
MRPL55-234ENST00000497758 WDR11Q9BZH6 1224 aa13.51□□□□□ -0.25
MRPL55-234ENST00000497758 NCOA5Q9HCD5 579 aaKnown RBP13.51□□□□□ -0.25
MRPL55-234ENST00000497758 PIK3CDO00329 1044 aa13.5□□□□□ -0.25
MRPL55-234ENST00000497758 DYNC1LI2O43237 492 aaPredicted RBP13.5□□□□□ -0.25
MRPL55-234ENST00000497758 ADCY6O43306 1168 aa13.5□□□□□ -0.25
MRPL55-234ENST00000497758 ADAMTS4O75173 837 aa13.5□□□□□ -0.25
MRPL55-234ENST00000497758 EIF3JO75822 258 aaKnown RBP13.5□□□□□ -0.25
MRPL55-234ENST00000497758 COL6A1P12109 1028 aa13.5□□□□□ -0.25
MRPL55-234ENST00000497758 MYCLP12524 364 aaPredicted RBP13.5□□□□□ -0.25
MRPL55-234ENST00000497758 SMPD1P17405 629 aa13.5□□□□□ -0.25
MRPL55-234ENST00000497758 CCND2P30279 289 aa13.5□□□□□ -0.25
MRPL55-234ENST00000497758 NEK4P51957 841 aa13.5□□□□□ -0.25
MRPL55-234ENST00000497758 TTLL4Q14679 1199 aa13.5□□□□□ -0.25
MRPL55-234ENST00000497758 DUSP28Q4G0W2 176 aa13.5□□□□□ -0.25
MRPL55-234ENST00000497758 GNASQ5JWF2 1037 aa13.5□□□□□ -0.25
MRPL55-234ENST00000497758 USP17L6PQ6QN14 398 aa13.5□□□□□ -0.25
MRPL55-234ENST00000497758 SEPT14Q6ZU15 432 aa13.5□□□□□ -0.25
MRPL55-234ENST00000497758 TRIM22Q8IYM9 498 aa13.5□□□□□ -0.25
MRPL55-234ENST00000497758 PCSK9Q8NBP7 692 aaKnown RBP13.5□□□□□ -0.25
MRPL55-234ENST00000497758 PHKBQ93100 1093 aa13.5□□□□□ -0.25
MRPL55-234ENST00000497758 FERMT2Q96AC1 680 aa13.5□□□□□ -0.25
MRPL55-234ENST00000497758 IL17RAQ96F46 866 aa13.5□□□□□ -0.25
MRPL55-234ENST00000497758 PDCD2LQ9BRP1 358 aa13.5□□□□□ -0.25
MRPL55-234ENST00000497758 SLC26A6Q9BXS9 759 aa13.5□□□□□ -0.25
MRPL55-234ENST00000497758 UPF3AQ9H1J1 476 aaKnown RBP13.5□□□□□ -0.25
MRPL55-234ENST00000497758 ALDH8A1Q9H2A2 487 aaPredicted RBP13.5□□□□□ -0.25
MRPL55-234ENST00000497758 SLKQ9H2G2 1235 aaPredicted RBP13.5□□□□□ -0.25
MRPL55-234ENST00000497758 BARHL2Q9NY43 387 aa13.5□□□□□ -0.25
MRPL55-234ENST00000497758 NR2E3Q9Y5X4 410 aa13.5□□□□□ -0.25
MRPL55-234ENST00000497758 SPDYE3A6NKU9 549 aa13.49□□□□□ -0.25
MRPL55-234ENST00000497758 PRPF3O43395 683 aaKnown RBP13.49□□□□□ -0.25
MRPL55-234ENST00000497758 ZEB2O60315 1214 aa13.49□□□□□ -0.25
MRPL55-234ENST00000497758 TXNP10599 105 aaKnown RBP13.49□□□□□ -0.25
MRPL55-234ENST00000497758 SCG2P13521 617 aa13.49□□□□□ -0.25
MRPL55-234ENST00000497758 IFNAR1P17181 557 aa13.49□□□□□ -0.25
MRPL55-234ENST00000497758 ADCY7P51828 1080 aa13.49□□□□□ -0.25
MRPL55-234ENST00000497758 AK2P54819 239 aa13.49□□□□□ -0.25
MRPL55-234ENST00000497758 GJA9P57773 515 aa13.49□□□□□ -0.25
MRPL55-234ENST00000497758 PGM5Q15124 567 aa13.49□□□□□ -0.25
MRPL55-234ENST00000497758 FSCN1Q16658 493 aaKnown RBP13.49□□□□□ -0.25
MRPL55-234ENST00000497758 PFKFB3Q16875 520 aaPredicted RBP13.49□□□□□ -0.25
MRPL55-234ENST00000497758 CCDC12Q8WUD4 166 aaPredicted RBP13.49□□□□□ -0.25
MRPL55-234ENST00000497758 TSEN34Q9BSV6 310 aaKnown RBP13.49□□□□□ -0.25
MRPL55-234ENST00000497758 RNF26Q9BY78 433 aaPredicted RBP13.49□□□□□ -0.25
MRPL55-234ENST00000497758 C22orf23Q9BZE7 217 aa13.49□□□□□ -0.25
MRPL55-234ENST00000497758 GLT8D2Q9H1C3 349 aa13.49□□□□□ -0.25
MRPL55-234ENST00000497758 EHMT1Q9H9B1 1298 aa13.49□□□□□ -0.25
MRPL55-234ENST00000497758 PHF24Q9UPV7 400 aa13.49□□□□□ -0.25
MRPL55-234ENST00000497758 GNEQ9Y223 722 aaKnown RBP13.49□□□□□ -0.25
MRPL55-234ENST00000497758 Q9Y3F1 56 aa13.49□□□□□ -0.25
MRPL55-234ENST00000497758 LRRC37A2A6NM11 1700 aa13.49□□□□□ -0.25
MRPL55-234ENST00000497758 RBM47A0AV96 593 aaKnown RBP13.48□□□□□ -0.25
MRPL55-234ENST00000497758 MYADML2A6NDP7 307 aa13.48□□□□□ -0.25
MRPL55-234ENST00000497758 MOXD2PA6NHM9 499 aa13.48□□□□□ -0.25
MRPL55-234ENST00000497758 STXBP3O00186 592 aa13.48□□□□□ -0.25
MRPL55-234ENST00000497758 MEIS2O14770 477 aa13.48□□□□□ -0.25
MRPL55-234ENST00000497758 NKRFO15226 690 aaKnown RBP eCLIP13.48□□□□□ -0.25
MRPL55-234ENST00000497758 PPFIA3O75145 1194 aa13.48□□□□□ -0.25
MRPL55-234ENST00000497758 CDKL5O76039 1030 aa13.48□□□□□ -0.25
MRPL55-234ENST00000497758 CST5P28325 142 aaPredicted RBP13.48□□□□□ -0.25
MRPL55-234ENST00000497758 ACLYP53396 1101 aa13.48□□□□□ -0.25
MRPL55-234ENST00000497758 ATN1P54259 1190 aaPredicted RBP13.48□□□□□ -0.25
MRPL55-234ENST00000497758 SSRP1Q08945 709 aaKnown RBP13.48□□□□□ -0.25
MRPL55-234ENST00000497758 KCNA10Q16322 511 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms