RNA–Protein interactions for RNA: ENST00000497622.1

FAM3C-205, Transcript of family with sequence similarity 3 member C, humanhuman

TSL 2

Gene FAM3C, Length 666 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3C-205ENST00000497622 UBXN11Q5T124 520 aa6.35□□□□□ -1.39
FAM3C-205ENST00000497622 ZFYVE27Q5T4F4 411 aa6.35□□□□□ -1.39
FAM3C-205ENST00000497622 BVESQ8NE79 360 aa6.35□□□□□ -1.39
FAM3C-205ENST00000497622 SMARCC2Q8TAQ2 1214 aa6.35□□□□□ -1.39
FAM3C-205ENST00000497622 PPP1R14AQ96A00 147 aa6.35□□□□□ -1.39
FAM3C-205ENST00000497622 BDH2Q9BUT1 245 aa6.35□□□□□ -1.39
FAM3C-205ENST00000497622 CLEC1BQ9P126 229 aa6.35□□□□□ -1.39
FAM3C-205ENST00000497622 FBLN5Q9UBX5 448 aa6.35□□□□□ -1.39
FAM3C-205ENST00000497622 INPP5FQ9Y2H2 1132 aa6.35□□□□□ -1.39
FAM3C-205ENST00000497622 EMC9Q9Y3B6 208 aa6.35□□□□□ -1.39
FAM3C-205ENST00000497622 NTRK1P04629 796 aa6.34□□□□□ -1.39
FAM3C-205ENST00000497622 PLS3P13797 630 aa6.34□□□□□ -1.39
FAM3C-205ENST00000497622 ZNF143P52747 638 aaPredicted RBP6.34□□□□□ -1.39
FAM3C-205ENST00000497622 SCRN1Q12765 414 aa6.34□□□□□ -1.39
FAM3C-205ENST00000497622 RTP5Q14D33 572 aa6.34□□□□□ -1.39
FAM3C-205ENST00000497622 NCAPHQ15003 741 aa6.34□□□□□ -1.39
FAM3C-205ENST00000497622 TTLL7Q6ZT98 887 aa6.34□□□□□ -1.39
FAM3C-205ENST00000497622 CARFQ8N187 725 aa6.34□□□□□ -1.39
FAM3C-205ENST00000497622 COPS5Q92905 334 aa6.34□□□□□ -1.39
FAM3C-205ENST00000497622 ANAPC16Q96DE5 110 aa6.34□□□□□ -1.39
FAM3C-205ENST00000497622 MMP19Q99542 508 aa6.34□□□□□ -1.39
FAM3C-205ENST00000497622 GPRC5CQ9NQ84 441 aa6.34□□□□□ -1.39
FAM3C-205ENST00000497622 APEX2Q9UBZ4 518 aa6.34□□□□□ -1.39
FAM3C-205ENST00000497622 DCP2Q8IU60 420 aaKnown RBP6.33□□□□□ -1.4
FAM3C-205ENST00000497622 ZNF513Q8N8E2 541 aaPredicted RBP6.33□□□□□ -1.4
FAM3C-205ENST00000497622 BORCS6Q96GS4 357 aa6.33□□□□□ -1.4
FAM3C-205ENST00000497622 TGIF2Q9GZN2 237 aa6.33□□□□□ -1.4
FAM3C-205ENST00000497622 AP5M1Q9H0R1 490 aa6.33□□□□□ -1.4
FAM3C-205ENST00000497622 PCDH18Q9HCL0 1135 aa6.33□□□□□ -1.4
FAM3C-205ENST00000497622 MARCH2Q9P0N8 246 aa6.33□□□□□ -1.4
FAM3C-205ENST00000497622 NTMQ9P121 344 aa6.33□□□□□ -1.4
FAM3C-205ENST00000497622 PRICKLE3O43900 615 aaPredicted RBP6.32□□□□□ -1.4
FAM3C-205ENST00000497622 SMARCA5O60264 1052 aaPredicted RBP6.32□□□□□ -1.4
FAM3C-205ENST00000497622 SARSP49591 514 aaKnown RBP6.32□□□□□ -1.4
FAM3C-205ENST00000497622 GJA9P57773 515 aa6.32□□□□□ -1.4
FAM3C-205ENST00000497622 SPATS1Q496A3 300 aa6.32□□□□□ -1.4
FAM3C-205ENST00000497622 IQCEQ6IPM2 695 aa6.32□□□□□ -1.4
FAM3C-205ENST00000497622 FERMT3Q86UX7 667 aa6.32□□□□□ -1.4
FAM3C-205ENST00000497622 FAM169BQ8N8A8 192 aa6.32□□□□□ -1.4
FAM3C-205ENST00000497622 ZBTB8AQ96BR9 441 aa6.32□□□□□ -1.4
FAM3C-205ENST00000497622 ACBD3Q9H3P7 528 aa6.32□□□□□ -1.4
FAM3C-205ENST00000497622 CCSER2Q9H7U1 834 aa6.32□□□□□ -1.4
FAM3C-205ENST00000497622 CYP26B1Q9NR63 512 aa6.32□□□□□ -1.4
FAM3C-205ENST00000497622 BTG4Q9NY30 223 aa6.32□□□□□ -1.4
FAM3C-205ENST00000497622 ADRB1P08588 477 aa6.31□□□□□ -1.4
FAM3C-205ENST00000497622 CYP2C8P10632 490 aa6.31□□□□□ -1.4
FAM3C-205ENST00000497622 DLX2Q07687 328 aaPredicted RBP6.31□□□□□ -1.4
FAM3C-205ENST00000497622 GTF2IRD2BQ6EKJ0 949 aa6.31□□□□□ -1.4
FAM3C-205ENST00000497622 GTF2IRD2Q86UP8 949 aa6.31□□□□□ -1.4
FAM3C-205ENST00000497622 PLEKHO2Q8TD55 490 aa6.31□□□□□ -1.4
FAM3C-205ENST00000497622 DDX11Q96FC9 970 aa6.31□□□□□ -1.4
FAM3C-205ENST00000497622 NOX5Q96PH1 765 aa6.31□□□□□ -1.4
FAM3C-205ENST00000497622 SIT1Q9Y3P8 196 aa6.31□□□□□ -1.4
FAM3C-205ENST00000497622 C22orf46C9J442 243 aa6.3□□□□□ -1.4
FAM3C-205ENST00000497622 NOBOXO60393 691 aa6.3□□□□□ -1.4
FAM3C-205ENST00000497622 THBDP07204 575 aa6.3□□□□□ -1.4
FAM3C-205ENST00000497622 ETV3LQ6ZN32 361 aa6.3□□□□□ -1.4
FAM3C-205ENST00000497622 VPS37DQ86XT2 251 aa6.3□□□□□ -1.4
FAM3C-205ENST00000497622 TRIM59Q8IWR1 403 aa6.3□□□□□ -1.4
FAM3C-205ENST00000497622 DDX1Q92499 740 aaKnown RBP6.3□□□□□ -1.4
FAM3C-205ENST00000497622 DPF3Q92784 378 aa6.3□□□□□ -1.4
FAM3C-205ENST00000497622 NKX2-4Q9H2Z4 354 aa6.3□□□□□ -1.4
FAM3C-205ENST00000497622 CNOT11Q9UKZ1 510 aaKnown RBP6.3□□□□□ -1.4
FAM3C-205ENST00000497622 K7ESM1 405 aa6.29□□□□□ -1.4
FAM3C-205ENST00000497622 RPL11P62913 178 aaKnown RBP6.29□□□□□ -1.4
FAM3C-205ENST00000497622 SMAD4Q13485 552 aaKnown RBP6.29□□□□□ -1.4
FAM3C-205ENST00000497622 MBLAC2Q68D91 279 aa6.29□□□□□ -1.4
FAM3C-205ENST00000497622 ZC3H18Q86VM9 953 aaKnown RBP6.29□□□□□ -1.4
FAM3C-205ENST00000497622 TEX2Q8IWB9 1127 aa6.29□□□□□ -1.4
FAM3C-205ENST00000497622 LINC00482Q8N8I6 264 aa6.29□□□□□ -1.4
FAM3C-205ENST00000497622 SEC14L1Q92503 715 aa6.29□□□□□ -1.4
FAM3C-205ENST00000497622 SPATA6Q9NWH7 488 aaPredicted RBP6.29□□□□□ -1.4
FAM3C-205ENST00000497622 KIAA1522Q9P206 1035 aaPredicted RBP6.29□□□□□ -1.4
FAM3C-205ENST00000497622 LRP2BPQ9P2M1 347 aa6.29□□□□□ -1.4
FAM3C-205ENST00000497622 JAG2Q9Y219 1238 aa6.29□□□□□ -1.4
FAM3C-205ENST00000497622 TIMM13Q9Y5L4 95 aaPredicted RBP6.29□□□□□ -1.4
FAM3C-205ENST00000497622 ATF4P18848 351 aaPredicted RBP6.28□□□□□ -1.4
FAM3C-205ENST00000497622 CNR2P34972 360 aa6.28□□□□□ -1.4
FAM3C-205ENST00000497622 GTF2A2P52657 109 aa6.28□□□□□ -1.4
FAM3C-205ENST00000497622 EFEMP1Q12805 493 aa6.28□□□□□ -1.4
FAM3C-205ENST00000497622 INF2Q27J81 1249 aa6.28□□□□□ -1.4
FAM3C-205ENST00000497622 SV2CQ496J9 727 aa6.28□□□□□ -1.4
FAM3C-205ENST00000497622 CD300LDQ6UXZ3 194 aa6.28□□□□□ -1.4
FAM3C-205ENST00000497622 FRS2Q8WU20 508 aa6.28□□□□□ -1.4
FAM3C-205ENST00000497622 MRGPRX3Q96LB0 322 aa6.28□□□□□ -1.4
FAM3C-205ENST00000497622 CAPN10Q9HC96 672 aa6.28□□□□□ -1.4
FAM3C-205ENST00000497622 PALD1Q9ULE6 856 aa6.28□□□□□ -1.4
FAM3C-205ENST00000497622 SGSM2O43147 1006 aa6.27□□□□□ -1.41
FAM3C-205ENST00000497622 MYO1BO43795 1136 aa6.27□□□□□ -1.41
FAM3C-205ENST00000497622 SSBP05455 408 aaKnown RBP eCLIP6.27□□□□□ -1.41
FAM3C-205ENST00000497622 C8BP07358 591 aa6.27□□□□□ -1.41
FAM3C-205ENST00000497622 HOXC12P31275 282 aa6.27□□□□□ -1.41
FAM3C-205ENST00000497622 NFKB2Q00653 900 aa6.27□□□□□ -1.41
FAM3C-205ENST00000497622 TNNI3KQ59H18 835 aa6.27□□□□□ -1.41
FAM3C-205ENST00000497622 MROH9Q5TGP6 573 aa6.27□□□□□ -1.41
FAM3C-205ENST00000497622 E4F1Q66K89 784 aaPredicted RBP6.27□□□□□ -1.41
FAM3C-205ENST00000497622 CEP68Q76N32 757 aa6.27□□□□□ -1.41
FAM3C-205ENST00000497622 MILR1Q7Z6M3 343 aa6.27□□□□□ -1.41
FAM3C-205ENST00000497622 ZNF761Q86XN6 746 aaPredicted RBP6.27□□□□□ -1.41
FAM3C-205ENST00000497622 KYQ8NBH2 561 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms