RNA–Protein interactions for RNA: ENST00000497089.1

HOXA9-206, Transcript of homeobox A9, humanhuman

TSL 1 (best)

Gene HOXA9, Length 1,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-206ENST00000497089 ZNF341Q9BYN7 854 aa7.81□□□□□ -1.16
HOXA9-206ENST00000497089 TSPYL1Q9H0U9 437 aa7.81□□□□□ -1.16
HOXA9-206ENST00000497089 R3HDMLQ9H3Y0 253 aa7.81□□□□□ -1.16
HOXA9-206ENST00000497089 ZCCHC17Q9NP64 241 aaKnown RBP7.81□□□□□ -1.16
HOXA9-206ENST00000497089 USP40Q9NVE5 1235 aa7.81□□□□□ -1.16
HOXA9-206ENST00000497089 ABCF2Q9UG63 623 aa7.81□□□□□ -1.16
HOXA9-206ENST00000497089 USP20Q9Y2K6 914 aa7.81□□□□□ -1.16
HOXA9-206ENST00000497089 COL2A1P02458 1487 aaPredicted RBP7.81□□□□□ -1.16
HOXA9-206ENST00000497089 MAST2Q6P0Q8 1798 aa7.81□□□□□ -1.16
HOXA9-206ENST00000497089 AK9Q5TCS8 1911 aa7.8□□□□□ -1.16
HOXA9-206ENST00000497089 FKTNO75072 461 aa7.8□□□□□ -1.16
HOXA9-206ENST00000497089 LDHCP07864 332 aa7.8□□□□□ -1.16
HOXA9-206ENST00000497089 GSTO1P78417 241 aa7.8□□□□□ -1.16
HOXA9-206ENST00000497089 HMGN5P82970 282 aaKnown RBP7.8□□□□□ -1.16
HOXA9-206ENST00000497089 PPATQ06203 517 aa7.8□□□□□ -1.16
HOXA9-206ENST00000497089 TCP10Q12799 353 aa7.8□□□□□ -1.16
HOXA9-206ENST00000497089 CRHR2Q13324 411 aa7.8□□□□□ -1.16
HOXA9-206ENST00000497089 PPIL2Q13356 520 aa7.8□□□□□ -1.16
HOXA9-206ENST00000497089 CCDC158Q5M9N0 1113 aa7.8□□□□□ -1.16
HOXA9-206ENST00000497089 DNTTIP2Q5QJE6 756 aaKnown RBP7.8□□□□□ -1.16
HOXA9-206ENST00000497089 NOL9Q5SY16 702 aaKnown RBP7.8□□□□□ -1.16
HOXA9-206ENST00000497089 PI16Q6UXB8 463 aa7.8□□□□□ -1.16
HOXA9-206ENST00000497089 ZNF438Q7Z4V0 828 aa7.8□□□□□ -1.16
HOXA9-206ENST00000497089 ZFPM1Q8IX07 1006 aa7.8□□□□□ -1.16
HOXA9-206ENST00000497089 RPAP2Q8IXW5 612 aaPredicted RBP7.8□□□□□ -1.16
HOXA9-206ENST00000497089 MRRFQ96E11 262 aaKnown RBP7.8□□□□□ -1.16
HOXA9-206ENST00000497089 DBNDD2Q9BQY9 259 aa7.8□□□□□ -1.16
HOXA9-206ENST00000497089 ZBTB40Q9NUA8 1239 aa7.8□□□□□ -1.16
HOXA9-206ENST00000497089 DBNLQ9UJU6 430 aaKnown RBP7.8□□□□□ -1.16
HOXA9-206ENST00000497089 DDX19BQ9UMR2 479 aa7.8□□□□□ -1.16
HOXA9-206ENST00000497089 CCL15-CCL14A0A0B4J2E2 113 aa7.79□□□□□ -1.16
HOXA9-206ENST00000497089 CCDC85CA6NKD9 419 aa7.79□□□□□ -1.16
HOXA9-206ENST00000497089 PHF20L1A8MW92 1017 aa7.79□□□□□ -1.16
HOXA9-206ENST00000497089 XYLBO75191 536 aa7.79□□□□□ -1.16
HOXA9-206ENST00000497089 IGHA2P01877 340 aa7.79□□□□□ -1.16
HOXA9-206ENST00000497089 CETPP11597 493 aa7.79□□□□□ -1.16
HOXA9-206ENST00000497089 CD33P20138 364 aa7.79□□□□□ -1.16
HOXA9-206ENST00000497089 MX2P20592 715 aa7.79□□□□□ -1.16
HOXA9-206ENST00000497089 BTDP43251 543 aa7.79□□□□□ -1.16
HOXA9-206ENST00000497089 NASPP49321 788 aaPredicted RBP7.79□□□□□ -1.16
HOXA9-206ENST00000497089 IRX3P78415 501 aaPredicted RBP7.79□□□□□ -1.16
HOXA9-206ENST00000497089 SFSWAPQ12872 951 aaKnown RBP7.79□□□□□ -1.16
HOXA9-206ENST00000497089 OS9Q13438 667 aaPredicted RBP7.79□□□□□ -1.16
HOXA9-206ENST00000497089 CCL15Q16663 113 aa7.79□□□□□ -1.16
HOXA9-206ENST00000497089 HSP90AB4PQ58FF6 505 aa7.79□□□□□ -1.16
HOXA9-206ENST00000497089 PDE12Q6L8Q7 609 aaKnown RBP7.79□□□□□ -1.16
HOXA9-206ENST00000497089 MIGA2Q7L4E1 593 aa7.79□□□□□ -1.16
HOXA9-206ENST00000497089 ERC1Q8IUD2 1116 aa7.79□□□□□ -1.16
HOXA9-206ENST00000497089 ZKSCAN4Q969J2 545 aaPredicted RBP7.79□□□□□ -1.16
HOXA9-206ENST00000497089 EAF2Q96CJ1 260 aaPredicted RBP7.79□□□□□ -1.16
HOXA9-206ENST00000497089 CNTNAP3BQ96NU0 1288 aa7.79□□□□□ -1.16
HOXA9-206ENST00000497089 DNAJC2Q99543 621 aaKnown RBP7.79□□□□□ -1.16
HOXA9-206ENST00000497089 CNTNAP3Q9BZ76 1288 aa7.79□□□□□ -1.16
HOXA9-206ENST00000497089 C11orf16Q9NQ32 467 aa7.79□□□□□ -1.16
HOXA9-206ENST00000497089 DDX4Q9NQI0 724 aaKnown RBP7.79□□□□□ -1.16
HOXA9-206ENST00000497089 MARK1Q9P0L2 795 aa7.79□□□□□ -1.16
HOXA9-206ENST00000497089 NOL7Q9UMY1 257 aaKnown RBP7.79□□□□□ -1.16
HOXA9-206ENST00000497089 KCNH4Q9UQ05 1017 aa7.79□□□□□ -1.16
HOXA9-206ENST00000497089 MYO5AQ9Y4I1 1855 aaKnown RBP7.79□□□□□ -1.16
HOXA9-206ENST00000497089 CDK5RAP2Q96SN8 1893 aa7.78□□□□□ -1.16
HOXA9-206ENST00000497089 FOCADQ5VW36 1801 aa7.78□□□□□ -1.16
HOXA9-206ENST00000497089 PNMA6FA0A0J9YX94 578 aa7.78□□□□□ -1.16
HOXA9-206ENST00000497089 CCDC66A2RUB6 948 aa7.78□□□□□ -1.16
HOXA9-206ENST00000497089 DDTLA6NHG4 134 aaPredicted RBP7.78□□□□□ -1.16
HOXA9-206ENST00000497089 A6NHS1 94 aa7.78□□□□□ -1.16
HOXA9-206ENST00000497089 GOLGA6L22H0YM25 854 aa7.78□□□□□ -1.16
HOXA9-206ENST00000497089 CYP2E1P05181 493 aaPredicted RBP7.78□□□□□ -1.16
HOXA9-206ENST00000497089 CTBSQ01459 385 aa7.78□□□□□ -1.16
HOXA9-206ENST00000497089 SNAPC2Q13487 334 aa7.78□□□□□ -1.16
HOXA9-206ENST00000497089 PDE3AQ14432 1141 aa7.78□□□□□ -1.16
HOXA9-206ENST00000497089 TTC39AQ5SRH9 613 aa7.78□□□□□ -1.16
HOXA9-206ENST00000497089 ALG1LQ6GMV1 187 aa7.78□□□□□ -1.16
HOXA9-206ENST00000497089 FBXO46Q6PJ61 603 aaPredicted RBP7.78□□□□□ -1.16
HOXA9-206ENST00000497089 TMED8Q6PL24 325 aaPredicted RBP7.78□□□□□ -1.16
HOXA9-206ENST00000497089 XKR5Q6UX68 686 aa7.78□□□□□ -1.16
HOXA9-206ENST00000497089 SIRT2Q8IXJ6 389 aa7.78□□□□□ -1.16
HOXA9-206ENST00000497089 TBC1D32Q96NH3 1257 aa7.78□□□□□ -1.16
HOXA9-206ENST00000497089 TLR7Q9NYK1 1049 aaKnown RBP7.78□□□□□ -1.16
HOXA9-206ENST00000497089 LRP2BPQ9P2M1 347 aa7.78□□□□□ -1.16
HOXA9-206ENST00000497089 KCNMB2Q9Y691 235 aa7.78□□□□□ -1.16
HOXA9-206ENST00000497089 DOCK1Q14185 1865 aa7.77□□□□□ -1.16
HOXA9-206ENST00000497089 PHIPQ8WWQ0 1821 aa7.77□□□□□ -1.16
HOXA9-206ENST00000497089 CXCL11O14625 94 aa7.77□□□□□ -1.17
HOXA9-206ENST00000497089 WIPF1O43516 503 aa7.77□□□□□ -1.17
HOXA9-206ENST00000497089 CTNND1O60716 968 aaKnown RBP7.77□□□□□ -1.17
HOXA9-206ENST00000497089 HMMRO75330 724 aa7.77□□□□□ -1.17
HOXA9-206ENST00000497089 PRPF40AO75400 957 aaKnown RBP7.77□□□□□ -1.17
HOXA9-206ENST00000497089 TAGLNQ01995 201 aaKnown RBP7.77□□□□□ -1.17
HOXA9-206ENST00000497089 ENOX2Q16206 610 aaKnown RBP7.77□□□□□ -1.17
HOXA9-206ENST00000497089 ERO1AQ96HE7 468 aa7.77□□□□□ -1.17
HOXA9-206ENST00000497089 DNAJC25Q9H1X3 360 aa7.77□□□□□ -1.17
HOXA9-206ENST00000497089 RAI14Q9P0K7 980 aa7.77□□□□□ -1.17
HOXA9-206ENST00000497089 CCDC39Q9UFE4 941 aa7.77□□□□□ -1.17
HOXA9-206ENST00000497089 EXOC6BQ9Y2D4 811 aa7.77□□□□□ -1.17
HOXA9-206ENST00000497089 PTPRFP10586 1907 aa7.77□□□□□ -1.17
HOXA9-206ENST00000497089 BTBD19C9JJ37 291 aa7.76□□□□□ -1.17
HOXA9-206ENST00000497089 C2CD2LO14523 706 aa7.76□□□□□ -1.17
HOXA9-206ENST00000497089 TLR2O60603 784 aa7.76□□□□□ -1.17
HOXA9-206ENST00000497089 CPNE3O75131 537 aaKnown RBP7.76□□□□□ -1.17
HOXA9-206ENST00000497089 BAG3O95817 575 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms