RNA–Protein interactions for RNA: ENST00000496342.1

RHBDD3-207, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 849 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-207ENST00000496342 RMDN3Q96TC7 470 aa20.32■□□□□ 0.84
RHBDD3-207ENST00000496342 PXMP2Q9NR77 195 aa20.32■□□□□ 0.84
RHBDD3-207ENST00000496342 FAM217BQ9NTX9 383 aaPredicted RBP20.32■□□□□ 0.84
RHBDD3-207ENST00000496342 ATP11BQ9Y2G3 1177 aa20.32■□□□□ 0.84
RHBDD3-207ENST00000496342 NR2E3Q9Y5X4 410 aa20.32■□□□□ 0.84
RHBDD3-207ENST00000496342 DYNC1LI2O43237 492 aaPredicted RBP20.31■□□□□ 0.84
RHBDD3-207ENST00000496342 ARIH2O95376 493 aa20.31■□□□□ 0.84
RHBDD3-207ENST00000496342 ACLYP53396 1101 aa20.31■□□□□ 0.84
RHBDD3-207ENST00000496342 GHRHRQ02643 423 aa20.31■□□□□ 0.84
RHBDD3-207ENST00000496342 ARHGEF16Q5VV41 709 aa20.31■□□□□ 0.84
RHBDD3-207ENST00000496342 CHRDL2Q6WN34 429 aa20.31■□□□□ 0.84
RHBDD3-207ENST00000496342 LZTS2Q9BRK4 669 aa20.31■□□□□ 0.84
RHBDD3-207ENST00000496342 WDR11Q9BZH6 1224 aa20.31■□□□□ 0.84
RHBDD3-207ENST00000496342 UPF3BQ9BZI7 483 aaKnown RBP20.31■□□□□ 0.84
RHBDD3-207ENST00000496342 SEC63Q9UGP8 760 aaKnown RBP20.31■□□□□ 0.84
RHBDD3-207ENST00000496342 LOC102724159A0A0B4J2E5 919 aa20.3■□□□□ 0.84
RHBDD3-207ENST00000496342 CST5P28325 142 aaPredicted RBP20.3■□□□□ 0.84
RHBDD3-207ENST00000496342 SMARCA1P28370 1054 aa20.3■□□□□ 0.84
RHBDD3-207ENST00000496342 PWP2Q15269 919 aaKnown RBP20.3■□□□□ 0.84
RHBDD3-207ENST00000496342 SEPT14Q6ZU15 432 aa20.3■□□□□ 0.84
RHBDD3-207ENST00000496342 NSUN6Q8TEA1 469 aaKnown RBP20.3■□□□□ 0.84
RHBDD3-207ENST00000496342 LARP6Q9BRS8 491 aaKnown RBP20.3■□□□□ 0.84
RHBDD3-207ENST00000496342 COLQQ9Y215 455 aaPredicted RBP20.3■□□□□ 0.84
RHBDD3-207ENST00000496342 RBM47A0AV96 593 aaKnown RBP20.29■□□□□ 0.84
RHBDD3-207ENST00000496342 GCOM1H8Y6P7 765 aaPredicted RBP20.29■□□□□ 0.84
RHBDD3-207ENST00000496342 PPFIA3O75145 1194 aa20.29■□□□□ 0.84
RHBDD3-207ENST00000496342 SEC24BO95487 1268 aa20.29■□□□□ 0.84
RHBDD3-207ENST00000496342 ASGR1P07306 291 aa20.29■□□□□ 0.84
RHBDD3-207ENST00000496342 POLR2MP0CAP2 368 aa20.29■□□□□ 0.84
RHBDD3-207ENST00000496342 MYCLP12524 364 aaPredicted RBP20.29■□□□□ 0.84
RHBDD3-207ENST00000496342 FUT2Q10981 343 aa20.29■□□□□ 0.84
RHBDD3-207ENST00000496342 DUSP28Q4G0W2 176 aa20.29■□□□□ 0.84
RHBDD3-207ENST00000496342 GNASQ5JWF2 1037 aa20.29■□□□□ 0.84
RHBDD3-207ENST00000496342 IQSEC1Q6DN90 963 aa20.29■□□□□ 0.84
RHBDD3-207ENST00000496342 RBM28Q9NW13 759 aaKnown RBP20.29■□□□□ 0.84
RHBDD3-207ENST00000496342 DNAH12Q6ZR08 3092 aa20.29■□□□□ 0.84
RHBDD3-207ENST00000496342 EPB41L2O43491 1005 aaKnown RBP20.28■□□□□ 0.84
RHBDD3-207ENST00000496342 NR3C2P08235 984 aa20.28■□□□□ 0.84
RHBDD3-207ENST00000496342 PSMA5P28066 241 aa20.28■□□□□ 0.84
RHBDD3-207ENST00000496342 ADD1P35611 737 aaKnown RBP20.28■□□□□ 0.84
RHBDD3-207ENST00000496342 METAP2P50579 478 aaKnown RBP eCLIP20.28■□□□□ 0.84
RHBDD3-207ENST00000496342 TOB2Q14106 344 aaPredicted RBP20.28■□□□□ 0.84
RHBDD3-207ENST00000496342 SNX17Q15036 470 aa20.28■□□□□ 0.84
RHBDD3-207ENST00000496342 USP17L6PQ6QN14 398 aa20.28■□□□□ 0.84
RHBDD3-207ENST00000496342 RUFY3Q7L099 469 aa20.28■□□□□ 0.84
RHBDD3-207ENST00000496342 HEATR3Q7Z4Q2 680 aa20.28■□□□□ 0.84
RHBDD3-207ENST00000496342 MPHOSPH6Q99547 160 aaKnown RBP20.28■□□□□ 0.84
RHBDD3-207ENST00000496342 PDCD2LQ9BRP1 358 aa20.28■□□□□ 0.84
RHBDD3-207ENST00000496342 AGXT2Q9BYV1 514 aa20.28■□□□□ 0.84
RHBDD3-207ENST00000496342 SPC25Q9HBM1 224 aa20.28■□□□□ 0.84
RHBDD3-207ENST00000496342 ZSWIM6Q9HCJ5 1215 aa20.28■□□□□ 0.84
RHBDD3-207ENST00000496342 STARD7Q9NQZ5 370 aa20.28■□□□□ 0.84
RHBDD3-207ENST00000496342 PGM5Q15124 567 aa20.27■□□□□ 0.84
RHBDD3-207ENST00000496342 PPP2R5BQ15173 497 aa20.27■□□□□ 0.84
RHBDD3-207ENST00000496342 FSCN1Q16658 493 aaKnown RBP20.27■□□□□ 0.84
RHBDD3-207ENST00000496342 UBE2SQ16763 222 aa20.27■□□□□ 0.84
RHBDD3-207ENST00000496342 WWC2Q6AWC2 1192 aa20.27■□□□□ 0.84
RHBDD3-207ENST00000496342 TYW1BQ6NUM6 668 aa20.27■□□□□ 0.84
RHBDD3-207ENST00000496342 CXCL17Q6UXB2 119 aa20.27■□□□□ 0.84
RHBDD3-207ENST00000496342 OR6J1Q8NGC5 347 aa20.27■□□□□ 0.84
RHBDD3-207ENST00000496342 TSEN34Q9BSV6 310 aaKnown RBP20.27■□□□□ 0.84
RHBDD3-207ENST00000496342 MAF1Q9H063 256 aa20.27■□□□□ 0.84
RHBDD3-207ENST00000496342 AP5M1Q9H0R1 490 aa20.27■□□□□ 0.84
RHBDD3-207ENST00000496342 MOXD2PA6NHM9 499 aa20.26■□□□□ 0.83
RHBDD3-207ENST00000496342 SORBS3O60504 671 aa20.26■□□□□ 0.83
RHBDD3-207ENST00000496342 TXNP10599 105 aaKnown RBP20.26■□□□□ 0.83
RHBDD3-207ENST00000496342 NKX3-2P78367 333 aa20.26■□□□□ 0.83
RHBDD3-207ENST00000496342 LY6KQ17RY6 165 aa20.26■□□□□ 0.83
RHBDD3-207ENST00000496342 SH3RF1Q7Z6J0 888 aa20.26■□□□□ 0.83
RHBDD3-207ENST00000496342 SCFD2Q8WU76 684 aa20.26■□□□□ 0.83
RHBDD3-207ENST00000496342 NCOA5Q9HCD5 579 aaKnown RBP20.26■□□□□ 0.83
RHBDD3-207ENST00000496342 PRDM5Q9NQX1 630 aaPredicted RBP20.26■□□□□ 0.83
RHBDD3-207ENST00000496342 SCN10AQ9Y5Y9 1956 aa20.26■□□□□ 0.83
RHBDD3-207ENST00000496342 NID2Q14112 1375 aa20.25■□□□□ 0.83
RHBDD3-207ENST00000496342 B4DLN1 442 aa20.25■□□□□ 0.83
RHBDD3-207ENST00000496342 MEIS2O14770 477 aa20.25■□□□□ 0.83
RHBDD3-207ENST00000496342 PQBP1O60828 265 aaKnown RBP20.25■□□□□ 0.83
RHBDD3-207ENST00000496342 RGS20O76081 388 aa20.25■□□□□ 0.83
RHBDD3-207ENST00000496342 MRPL12P52815 198 aaKnown RBP20.25■□□□□ 0.83
RHBDD3-207ENST00000496342 CCT2P78371 535 aaKnown RBP20.25■□□□□ 0.83
RHBDD3-207ENST00000496342 TLE2Q04725 743 aa20.25■□□□□ 0.83
RHBDD3-207ENST00000496342 TRAF1Q13077 416 aa20.25■□□□□ 0.83
RHBDD3-207ENST00000496342 STXBP2Q15833 593 aa20.25■□□□□ 0.83
RHBDD3-207ENST00000496342 PCSK9Q8NBP7 692 aaKnown RBP20.25■□□□□ 0.83
RHBDD3-207ENST00000496342 SMARCC2Q8TAQ2 1214 aa20.25■□□□□ 0.83
RHBDD3-207ENST00000496342 PPP1R13LQ8WUF5 828 aa20.25■□□□□ 0.83
RHBDD3-207ENST00000496342 IWS1Q96ST2 819 aa20.25■□□□□ 0.83
RHBDD3-207ENST00000496342 RBM27Q9P2N5 1060 aaKnown RBP20.25■□□□□ 0.83
RHBDD3-207ENST00000496342 CYP46A1Q9Y6A2 500 aa20.25■□□□□ 0.83
RHBDD3-207ENST00000496342 V9GY48 417 aaPredicted RBP20.25■□□□□ 0.83
RHBDD3-207ENST00000496342 MAGEA10P43363 369 aaPredicted RBP20.24■□□□□ 0.83
RHBDD3-207ENST00000496342 PSMC6P62333 389 aa20.24■□□□□ 0.83
RHBDD3-207ENST00000496342 MDM2Q00987 491 aaPredicted RBP20.24■□□□□ 0.83
RHBDD3-207ENST00000496342 TTLL4Q14679 1199 aa20.24■□□□□ 0.83
RHBDD3-207ENST00000496342 CCDC62Q6P9F0 684 aa20.24■□□□□ 0.83
RHBDD3-207ENST00000496342 VTI1AQ96AJ9 217 aa20.24■□□□□ 0.83
RHBDD3-207ENST00000496342 GLT1D1Q96MS3 346 aa20.24■□□□□ 0.83
RHBDD3-207ENST00000496342 PDLIM7Q9NR12 457 aa20.24■□□□□ 0.83
RHBDD3-207ENST00000496342 MAP3K20Q9NYL2 800 aaKnown RBP20.24■□□□□ 0.83
RHBDD3-207ENST00000496342 FRMPD4Q14CM0 1322 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms