RNA–Protein interactions for RNA: ENST00000496335.1

PDAP1-204, Transcript of PDGFA associated protein 1, humanhuman

TSL 3

Gene PDAP1, Length 302 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-204ENST00000496335 CALM1P0DP23 149 aa16.77■□□□□ 0.28
PDAP1-204ENST00000496335 CALM2P0DP24 149 aa16.77■□□□□ 0.28
PDAP1-204ENST00000496335 CALM3P0DP25 149 aa16.77■□□□□ 0.28
PDAP1-204ENST00000496335 HSPA4P34932 840 aa16.77■□□□□ 0.28
PDAP1-204ENST00000496335 FXR1P51114 621 aaKnown RBP eCLIP16.77■□□□□ 0.28
PDAP1-204ENST00000496335 MRPL12P52815 198 aaKnown RBP16.77■□□□□ 0.28
PDAP1-204ENST00000496335 GHRHRQ02643 423 aa16.77■□□□□ 0.28
PDAP1-204ENST00000496335 KRT32Q14532 448 aa16.77■□□□□ 0.28
PDAP1-204ENST00000496335 ARHGEF16Q5VV41 709 aa16.77■□□□□ 0.28
PDAP1-204ENST00000496335 CXCL17Q6UXB2 119 aa16.77■□□□□ 0.28
PDAP1-204ENST00000496335 SGMS1Q86VZ5 419 aa16.77■□□□□ 0.28
PDAP1-204ENST00000496335 MICU3Q86XE3 530 aa16.77■□□□□ 0.28
PDAP1-204ENST00000496335 CCDC82Q8N4S0 544 aa16.77■□□□□ 0.28
PDAP1-204ENST00000496335 KCNB2Q92953 911 aa16.77■□□□□ 0.28
PDAP1-204ENST00000496335 RRP36Q96EU6 259 aaKnown RBP16.77■□□□□ 0.28
PDAP1-204ENST00000496335 PDLIM7Q9NR12 457 aa16.77■□□□□ 0.28
PDAP1-204ENST00000496335 PRKAG2Q9UGJ0 569 aa16.77■□□□□ 0.28
PDAP1-204ENST00000496335 BRPF3Q9ULD4 1205 aa16.77■□□□□ 0.28
PDAP1-204ENST00000496335 Q9Y3F1 56 aa16.77■□□□□ 0.28
PDAP1-204ENST00000496335 SNX14Q9Y5W7 946 aa16.77■□□□□ 0.28
PDAP1-204ENST00000496335 ELP1O95163 1332 aa16.76■□□□□ 0.27
PDAP1-204ENST00000496335 LTBP2Q14767 1821 aa16.76■□□□□ 0.27
PDAP1-204ENST00000496335 hCG_1642624A0A1W2PR95 340 aa16.76■□□□□ 0.27
PDAP1-204ENST00000496335 TRIM43BA6NCK2 446 aa16.76■□□□□ 0.27
PDAP1-204ENST00000496335 SMARCA1P28370 1054 aa16.76■□□□□ 0.27
PDAP1-204ENST00000496335 BMP8BP34820 402 aa16.76■□□□□ 0.27
PDAP1-204ENST00000496335 GNAQP50148 359 aa16.76■□□□□ 0.27
PDAP1-204ENST00000496335 TRAF1Q13077 416 aa16.76■□□□□ 0.27
PDAP1-204ENST00000496335 APOA5Q6Q788 366 aa16.76■□□□□ 0.27
PDAP1-204ENST00000496335 FANCBQ8NB91 859 aa16.76■□□□□ 0.27
PDAP1-204ENST00000496335 SCFD2Q8WU76 684 aa16.76■□□□□ 0.27
PDAP1-204ENST00000496335 COPS5Q92905 334 aa16.76■□□□□ 0.27
PDAP1-204ENST00000496335 TRIM43Q96BQ3 446 aaPredicted RBP16.76■□□□□ 0.27
PDAP1-204ENST00000496335 IWS1Q96ST2 819 aa16.76■□□□□ 0.27
PDAP1-204ENST00000496335 LZTS2Q9BRK4 669 aa16.76■□□□□ 0.27
PDAP1-204ENST00000496335 PXMP2Q9NR77 195 aa16.76■□□□□ 0.27
PDAP1-204ENST00000496335 REC8O95072 547 aa16.75■□□□□ 0.27
PDAP1-204ENST00000496335 ARIH2O95376 493 aa16.75■□□□□ 0.27
PDAP1-204ENST00000496335 NR3C2P08235 984 aa16.75■□□□□ 0.27
PDAP1-204ENST00000496335 TXNP10599 105 aaKnown RBP16.75■□□□□ 0.27
PDAP1-204ENST00000496335 PPP2R5BQ15173 497 aa16.75■□□□□ 0.27
PDAP1-204ENST00000496335 STXBP2Q15833 593 aa16.75■□□□□ 0.27
PDAP1-204ENST00000496335 SYNE3Q6ZMZ3 975 aa16.75■□□□□ 0.27
PDAP1-204ENST00000496335 SEPT14Q6ZU15 432 aa16.75■□□□□ 0.27
PDAP1-204ENST00000496335 FCHSD1Q86WN1 690 aa16.75■□□□□ 0.27
PDAP1-204ENST00000496335 OR6J1Q8NGC5 347 aa16.75■□□□□ 0.27
PDAP1-204ENST00000496335 JAKMIP1Q96N16 626 aaKnown RBP16.75■□□□□ 0.27
PDAP1-204ENST00000496335 UBE2OQ9C0C9 1292 aaKnown RBP16.75■□□□□ 0.27
PDAP1-204ENST00000496335 LAMA3Q16787 3333 aa16.75■□□□□ 0.27
PDAP1-204ENST00000496335 GCOM1H8Y6P7 765 aaPredicted RBP16.74■□□□□ 0.27
PDAP1-204ENST00000496335 HMGB1P09429 215 aaKnown RBP16.74■□□□□ 0.27
PDAP1-204ENST00000496335 CLTBP09497 229 aa16.74■□□□□ 0.27
PDAP1-204ENST00000496335 POLR2MP0CAP2 368 aa16.74■□□□□ 0.27
PDAP1-204ENST00000496335 CDK7P50613 346 aa16.74■□□□□ 0.27
PDAP1-204ENST00000496335 FAAP100Q0VG06 881 aa16.74■□□□□ 0.27
PDAP1-204ENST00000496335 TMTC3Q6ZXV5 915 aa16.74■□□□□ 0.27
PDAP1-204ENST00000496335 ANKRD33Q7Z3H0 272 aa16.74■□□□□ 0.27
PDAP1-204ENST00000496335 SAMD3Q8N6K7 520 aa16.74■□□□□ 0.27
PDAP1-204ENST00000496335 LBHD1Q9BQE6 289 aaPredicted RBP16.74■□□□□ 0.27
PDAP1-204ENST00000496335 PDCD2LQ9BRP1 358 aa16.74■□□□□ 0.27
PDAP1-204ENST00000496335 MAP3K20Q9NYL2 800 aaKnown RBP16.74■□□□□ 0.27
PDAP1-204ENST00000496335 SEC63Q9UGP8 760 aaKnown RBP16.74■□□□□ 0.27
PDAP1-204ENST00000496335 MYH7BA7E2Y1 1941 aa16.74■□□□□ 0.27
PDAP1-204ENST00000496335 A0A0U1RQG5 324 aaPredicted RBP16.73■□□□□ 0.27
PDAP1-204ENST00000496335 KLF18A0A0U1RQI7 1052 aa16.73■□□□□ 0.27
PDAP1-204ENST00000496335 A0A1W2PPC1 479 aa16.73■□□□□ 0.27
PDAP1-204ENST00000496335 DCDC2CA8MYV0 355 aa16.73■□□□□ 0.27
PDAP1-204ENST00000496335 ARVCFO00192 962 aa16.73■□□□□ 0.27
PDAP1-204ENST00000496335 ZEB2O60315 1214 aa16.73■□□□□ 0.27
PDAP1-204ENST00000496335 MYCLP12524 364 aaPredicted RBP16.73■□□□□ 0.27
PDAP1-204ENST00000496335 ITGB8P26012 769 aa16.73■□□□□ 0.27
PDAP1-204ENST00000496335 PSMC6P62333 389 aa16.73■□□□□ 0.27
PDAP1-204ENST00000496335 TTLL4Q14679 1199 aa16.73■□□□□ 0.27
PDAP1-204ENST00000496335 LY6KQ17RY6 165 aa16.73■□□□□ 0.27
PDAP1-204ENST00000496335 CCDC62Q6P9F0 684 aa16.73■□□□□ 0.27
PDAP1-204ENST00000496335 IL31RAQ8NI17 732 aa16.73■□□□□ 0.27
PDAP1-204ENST00000496335 BADQ92934 168 aa16.73■□□□□ 0.27
PDAP1-204ENST00000496335 ZFP91Q96JP5 570 aaPredicted RBP16.73■□□□□ 0.27
PDAP1-204ENST00000496335 TOX2Q96NM4 488 aa16.73■□□□□ 0.27
PDAP1-204ENST00000496335 GRIN2DO15399 1336 aa16.72■□□□□ 0.27
PDAP1-204ENST00000496335 NKRFO15226 690 aaKnown RBP eCLIP16.72■□□□□ 0.27
PDAP1-204ENST00000496335 ZBTB43O43298 467 aa16.72■□□□□ 0.27
PDAP1-204ENST00000496335 EIF3JO75822 258 aaKnown RBP16.72■□□□□ 0.27
PDAP1-204ENST00000496335 CABYRO75952 493 aa16.72■□□□□ 0.27
PDAP1-204ENST00000496335 SLC34A2O95436 690 aa16.72■□□□□ 0.27
PDAP1-204ENST00000496335 FGD1P98174 961 aa16.72■□□□□ 0.27
PDAP1-204ENST00000496335 PGM5Q15124 567 aa16.72■□□□□ 0.27
PDAP1-204ENST00000496335 BLOC1S2Q6QNY1 142 aa16.72■□□□□ 0.27
PDAP1-204ENST00000496335 Q6ZUG5 572 aa16.72■□□□□ 0.27
PDAP1-204ENST00000496335 TMEM39AQ9NV64 488 aa16.72■□□□□ 0.27
PDAP1-204ENST00000496335 NAP1L2Q9ULW6 460 aaPredicted RBP16.72■□□□□ 0.27
PDAP1-204ENST00000496335 SZT2Q5T011 3432 aa16.72■□□□□ 0.27
PDAP1-204ENST00000496335 KIAA0355O15063 1070 aa16.71■□□□□ 0.27
PDAP1-204ENST00000496335 RGS20O76081 388 aa16.71■□□□□ 0.27
PDAP1-204ENST00000496335 MYL3P08590 195 aa16.71■□□□□ 0.27
PDAP1-204ENST00000496335 CPT1AP50416 773 aa16.71■□□□□ 0.27
PDAP1-204ENST00000496335 PURAQ00577 322 aaKnown RBP16.71■□□□□ 0.27
PDAP1-204ENST00000496335 APOBRQ0VD83 1088 aa16.71■□□□□ 0.27
PDAP1-204ENST00000496335 ITGA7Q13683 1181 aa16.71■□□□□ 0.27
PDAP1-204ENST00000496335 RTN1Q16799 776 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms