RNA–Protein interactions for RNA: ENST00000496030.1

APTX-233, Transcript of aprataxin, human

TSL 3

Gene APTX, Length 633 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-233	ENST00000496030	CYP39A1	Q9NYL5	469 aa		13.75	□□□□□ -0.21
APTX-233	ENST00000496030	PLXNA1	Q9UIW2	1896 aa		13.74	□□□□□ -0.21
APTX-233	ENST00000496030	SOWAHB	A6NEL2	793 aa		13.74	□□□□□ -0.21
APTX-233	ENST00000496030	BAAT	Q14032	418 aa	Predicted RBP	13.74	□□□□□ -0.21
APTX-233	ENST00000496030	LHX8	Q68G74	356 aa		13.74	□□□□□ -0.21
APTX-233	ENST00000496030	ANKRD35	Q8N283	1001 aa		13.74	□□□□□ -0.21
APTX-233	ENST00000496030	CWC22	Q9HCG8	908 aa	Known RBP	13.74	□□□□□ -0.21
APTX-233	ENST00000496030	MRPL11	Q9Y3B7	192 aa	Known RBP	13.74	□□□□□ -0.21
APTX-233	ENST00000496030	CCND3	P30281	292 aa	Predicted RBP	13.73	□□□□□ -0.21
APTX-233	ENST00000496030	RPS6	P62753	249 aa	Known RBP	13.73	□□□□□ -0.21
APTX-233	ENST00000496030	CACNB2	Q08289	660 aa	Predicted RBP	13.73	□□□□□ -0.21
APTX-233	ENST00000496030	PFKFB3	Q16875	520 aa	Predicted RBP	13.73	□□□□□ -0.21
APTX-233	ENST00000496030	WWC2	Q6AWC2	1192 aa		13.73	□□□□□ -0.21
APTX-233	ENST00000496030	NSMF	Q6X4W1	530 aa		13.73	□□□□□ -0.21
APTX-233	ENST00000496030	SLC30A10	Q6XR72	485 aa		13.73	□□□□□ -0.21
APTX-233	ENST00000496030	DPP9	Q86TI2	863 aa		13.73	□□□□□ -0.21
APTX-233	ENST00000496030	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	13.73	□□□□□ -0.21	9e-6	■■□□□ 14.5
APTX-233	ENST00000496030	DDX11	Q96FC9	970 aa		13.73	□□□□□ -0.21
APTX-233	ENST00000496030	MAML3	Q96JK9	1138 aa		13.73	□□□□□ -0.21
APTX-233	ENST00000496030	APBA2	Q99767	749 aa		13.73	□□□□□ -0.21
APTX-233	ENST00000496030	RNF26	Q9BY78	433 aa	Predicted RBP	13.73	□□□□□ -0.21
APTX-233	ENST00000496030	MAF1	Q9H063	256 aa		13.73	□□□□□ -0.21
APTX-233	ENST00000496030	COL20A1	Q9P218	1284 aa		13.73	□□□□□ -0.21
APTX-233	ENST00000496030	SEC63	Q9UGP8	760 aa	Known RBP	13.73	□□□□□ -0.21
APTX-233	ENST00000496030	DIS3	Q9Y2L1	958 aa	Known RBP	13.73	□□□□□ -0.21
APTX-233	ENST00000496030	STXBP3	O00186	592 aa		13.72	□□□□□ -0.21
APTX-233	ENST00000496030	ST18	O60284	1047 aa		13.72	□□□□□ -0.21
APTX-233	ENST00000496030	SCG2	P13521	617 aa		13.72	□□□□□ -0.21
APTX-233	ENST00000496030	FDPS	P14324	419 aa	Known RBP	13.72	□□□□□ -0.21
APTX-233	ENST00000496030	HSD17B4	P51659	736 aa		13.72	□□□□□ -0.21
APTX-233	ENST00000496030	TRAF1	Q13077	416 aa		13.72	□□□□□ -0.21
APTX-233	ENST00000496030	SHH	Q15465	462 aa		13.72	□□□□□ -0.21
APTX-233	ENST00000496030	C9orf50	Q5SZB4	431 aa		13.72	□□□□□ -0.21
APTX-233	ENST00000496030	OLFML2B	Q68BL8	750 aa		13.72	□□□□□ -0.21
APTX-233	ENST00000496030	RNF207	Q6ZRF8	634 aa		13.72	□□□□□ -0.21
APTX-233	ENST00000496030	SYTL5	Q8TDW5	730 aa	Predicted RBP	13.72	□□□□□ -0.21
APTX-233	ENST00000496030	ZSCAN31	Q96LW9	406 aa	Predicted RBP	13.72	□□□□□ -0.21
APTX-233	ENST00000496030	LBHD1	Q9BQE6	289 aa	Predicted RBP	13.72	□□□□□ -0.21
APTX-233	ENST00000496030	SLC26A6	Q9BXS9	759 aa		13.72	□□□□□ -0.21
APTX-233	ENST00000496030	BARHL2	Q9NY43	387 aa		13.72	□□□□□ -0.21
APTX-233	ENST00000496030	MCM3AP	O60318	1980 aa		13.71	□□□□□ -0.21
APTX-233	ENST00000496030	MEIS2	O14770	477 aa		13.71	□□□□□ -0.21
APTX-233	ENST00000496030	CPLX1	O14810	134 aa		13.71	□□□□□ -0.21
APTX-233	ENST00000496030	ADAMTS3	O15072	1205 aa		13.71	□□□□□ -0.21
APTX-233	ENST00000496030	MAMDC4	Q6UXC1	1216 aa		13.71	□□□□□ -0.21
APTX-233	ENST00000496030	HEATR3	Q7Z4Q2	680 aa		13.71	□□□□□ -0.21
APTX-233	ENST00000496030	ZNF467	Q7Z7K2	595 aa	Predicted RBP	13.71	□□□□□ -0.21
APTX-233	ENST00000496030	MCF2L2	Q86YR7	1114 aa		13.71	□□□□□ -0.21
APTX-233	ENST00000496030	USP38	Q8NB14	1042 aa		13.71	□□□□□ -0.21
APTX-233	ENST00000496030	NSUN7	Q8NE18	718 aa	Known RBP	13.71	□□□□□ -0.21
APTX-233	ENST00000496030	SYMPK	Q92797	1274 aa	Known RBP	13.71	□□□□□ -0.21
APTX-233	ENST00000496030	TMX3	Q96JJ7	454 aa		13.71	□□□□□ -0.21
APTX-233	ENST00000496030	AIFM3	Q96NN9	605 aa		13.71	□□□□□ -0.21
APTX-233	ENST00000496030	DDX49	Q9Y6V7	483 aa	Known RBP	13.71	□□□□□ -0.21
APTX-233	ENST00000496030	BDP1	A6H8Y1	2624 aa		13.7	□□□□□ -0.22
APTX-233	ENST00000496030	NCOR1	O75376	2440 aa		13.7	□□□□□ -0.22
APTX-233	ENST00000496030	PTPDC1	A2A3K4	754 aa		13.7	□□□□□ -0.22
APTX-233	ENST00000496030	TNFRSF10A	O00220	468 aa		13.7	□□□□□ -0.22
APTX-233	ENST00000496030	JAK2	O60674	1132 aa		13.7	□□□□□ -0.22
APTX-233	ENST00000496030	SNAI1	O95863	264 aa	Predicted RBP	13.7	□□□□□ -0.22
APTX-233	ENST00000496030	CFB	P00751	764 aa		13.7	□□□□□ -0.22
APTX-233	ENST00000496030	FOSL2	P15408	326 aa		13.7	□□□□□ -0.22
APTX-233	ENST00000496030	CALML3	P27482	149 aa		13.7	□□□□□ -0.22
APTX-233	ENST00000496030	HOXA13	P31271	388 aa	Predicted RBP	13.7	□□□□□ -0.22
APTX-233	ENST00000496030	CYP2C19	P33261	490 aa		13.7	□□□□□ -0.22
APTX-233	ENST00000496030	SSRP1	Q08945	709 aa	Known RBP	13.7	□□□□□ -0.22
APTX-233	ENST00000496030	TRMT44	Q8IYL2	757 aa	Known RBP	13.7	□□□□□ -0.22
APTX-233	ENST00000496030	TAAR1	Q96RJ0	339 aa		13.7	□□□□□ -0.22
APTX-233	ENST00000496030	TINF2	Q9BSI4	451 aa		13.7	□□□□□ -0.22
APTX-233	ENST00000496030	SH2B1	Q9NRF2	756 aa	Predicted RBP	13.7	□□□□□ -0.22
APTX-233	ENST00000496030	SLC5A4	Q9NY91	659 aa		13.7	□□□□□ -0.22
APTX-233	ENST00000496030	MAP3K20	Q9NYL2	800 aa	Known RBP	13.7	□□□□□ -0.22
APTX-233	ENST00000496030	STK36	Q9NRP7	1315 aa		13.69	□□□□□ -0.22
APTX-233	ENST00000496030	hCG_1984214	I3L0E3	225 aa		13.69	□□□□□ -0.22
APTX-233	ENST00000496030	PIK3CD	O00329	1044 aa		13.69	□□□□□ -0.22
APTX-233	ENST00000496030	DEXI	O95424	95 aa		13.69	□□□□□ -0.22
APTX-233	ENST00000496030	PLA2G5	P39877	138 aa		13.69	□□□□□ -0.22
APTX-233	ENST00000496030	ATN1	P54259	1190 aa	Predicted RBP	13.69	□□□□□ -0.22
APTX-233	ENST00000496030	CPLX2	Q6PUV4	134 aa	Known RBP	13.69	□□□□□ -0.22
APTX-233	ENST00000496030	USP17L6P	Q6QN14	398 aa		13.69	□□□□□ -0.22
APTX-233	ENST00000496030	CCDC83	Q8IWF9	413 aa		13.69	□□□□□ -0.22
APTX-233	ENST00000496030	SAMD3	Q8N6K7	520 aa		13.69	□□□□□ -0.22
APTX-233	ENST00000496030	ZNF713	Q8N859	430 aa	Predicted RBP	13.69	□□□□□ -0.22
APTX-233	ENST00000496030	TRPV1	Q8NER1	839 aa		13.69	□□□□□ -0.22
APTX-233	ENST00000496030	SMARCC2	Q8TAQ2	1214 aa		13.69	□□□□□ -0.22
APTX-233	ENST00000496030	MORC4	Q8TE76	937 aa		13.69	□□□□□ -0.22
APTX-233	ENST00000496030	SENP6	Q9GZR1	1112 aa	Predicted RBP	13.69	□□□□□ -0.22
APTX-233	ENST00000496030	KATNBL1	Q9H079	304 aa		13.69	□□□□□ -0.22
APTX-233	ENST00000496030	PSTPIP2	Q9H939	334 aa		13.69	□□□□□ -0.22
APTX-233	ENST00000496030	GCOM1	H8Y6P7	765 aa	Predicted RBP	13.68	□□□□□ -0.22
APTX-233	ENST00000496030	CDKL5	O76039	1030 aa		13.68	□□□□□ -0.22
APTX-233	ENST00000496030	POLR2M	P0CAP2	368 aa		13.68	□□□□□ -0.22
APTX-233	ENST00000496030	EDNRB	P24530	442 aa		13.68	□□□□□ -0.22
APTX-233	ENST00000496030	MCM2	P49736	904 aa		13.68	□□□□□ -0.22
APTX-233	ENST00000496030	ALDH5A1	P51649	535 aa	Predicted RBP	13.68	□□□□□ -0.22
APTX-233	ENST00000496030	NAPA	P54920	295 aa		13.68	□□□□□ -0.22
APTX-233	ENST00000496030	NPY5R	Q15761	445 aa		13.68	□□□□□ -0.22
APTX-233	ENST00000496030	TJAP1	Q5JTD0	557 aa		13.68	□□□□□ -0.22
APTX-233	ENST00000496030	PRAMEF19	Q5SWL8	479 aa		13.68	□□□□□ -0.22
APTX-233	ENST00000496030	PPP1R18	Q6NYC8	613 aa		13.68	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms