RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 GCFC2P16383 781 aaKnown RBP12.81□□□□□ -0.36
RFC4-214ENST00000494047 FXR2P51116 673 aaKnown RBP eCLIP12.81□□□□□ -0.36
RFC4-214ENST00000494047 NAPAP54920 295 aa12.81□□□□□ -0.36
RFC4-214ENST00000494047 AMPD2Q01433 879 aa12.81□□□□□ -0.36
RFC4-214ENST00000494047 KIF5AQ12840 1032 aa12.81□□□□□ -0.36
RFC4-214ENST00000494047 PDIA5Q14554 519 aa12.81□□□□□ -0.36
RFC4-214ENST00000494047 HSP90AA4PQ58FG1 418 aa12.81□□□□□ -0.36
RFC4-214ENST00000494047 BEND6Q5SZJ8 279 aaPredicted RBP12.81□□□□□ -0.36
RFC4-214ENST00000494047 TTI2Q6NXR4 508 aa12.81□□□□□ -0.36
RFC4-214ENST00000494047 C16orf86Q6ZW13 317 aa12.81□□□□□ -0.36
RFC4-214ENST00000494047 TRAPPC11Q7Z392 1133 aa12.81□□□□□ -0.36
RFC4-214ENST00000494047 KCTD17Q8N5Z5 321 aa12.81□□□□□ -0.36
RFC4-214ENST00000494047 NEDD1Q8NHV4 660 aa12.81□□□□□ -0.36
RFC4-214ENST00000494047 RBM46Q8TBY0 533 aaKnown RBP12.81□□□□□ -0.36
RFC4-214ENST00000494047 CELF1Q92879 486 aaKnown RBP12.81□□□□□ -0.36
RFC4-214ENST00000494047 SHISA4Q96DD7 197 aa12.81□□□□□ -0.36
RFC4-214ENST00000494047 FAM163AQ96GL9 167 aaPredicted RBP12.81□□□□□ -0.36
RFC4-214ENST00000494047 TUBGCP2Q9BSJ2 902 aa12.81□□□□□ -0.36
RFC4-214ENST00000494047 VPS16Q9H269 839 aa12.81□□□□□ -0.36
RFC4-214ENST00000494047 RRAGCQ9HB90 399 aa12.81□□□□□ -0.36
RFC4-214ENST00000494047 NMRK2Q9NPI5 230 aa12.81□□□□□ -0.36
RFC4-214ENST00000494047 ZNF277Q9NRM2 450 aaPredicted RBP12.81□□□□□ -0.36
RFC4-214ENST00000494047 TAB2Q9NYJ8 693 aa12.81□□□□□ -0.36
RFC4-214ENST00000494047 WDR90Q96KV7 1748 aa12.8□□□□□ -0.36
RFC4-214ENST00000494047 IQCA1LA6NCM1 817 aa12.8□□□□□ -0.36
RFC4-214ENST00000494047 FZD9O00144 591 aa12.8□□□□□ -0.36
RFC4-214ENST00000494047 SNAP23O00161 211 aa12.8□□□□□ -0.36
RFC4-214ENST00000494047 FANCGO15287 622 aa12.8□□□□□ -0.36
RFC4-214ENST00000494047 TACC1O75410 805 aa12.8□□□□□ -0.36
RFC4-214ENST00000494047 ATP2B4P23634 1241 aa12.8□□□□□ -0.36
RFC4-214ENST00000494047 NOVP48745 357 aa12.8□□□□□ -0.36
RFC4-214ENST00000494047 VAV2P52735 878 aa12.8□□□□□ -0.36
RFC4-214ENST00000494047 ERVK-24P63145 666 aa12.8□□□□□ -0.36
RFC4-214ENST00000494047 CCDC122Q5T0U0 273 aa12.8□□□□□ -0.36
RFC4-214ENST00000494047 DPP8Q6V1X1 898 aaPredicted RBP12.8□□□□□ -0.36
RFC4-214ENST00000494047 UNC13DQ70J99 1090 aa12.8□□□□□ -0.36
RFC4-214ENST00000494047 SV2BQ7L1I2 683 aa12.8□□□□□ -0.36
RFC4-214ENST00000494047 HEATR3Q7Z4Q2 680 aa12.8□□□□□ -0.36
RFC4-214ENST00000494047 REXO1Q8N1G1 1221 aaKnown RBP12.8□□□□□ -0.36
RFC4-214ENST00000494047 GUF1Q8N442 669 aaKnown RBP12.8□□□□□ -0.36
RFC4-214ENST00000494047 ZNF384Q8TF68 577 aa12.8□□□□□ -0.36
RFC4-214ENST00000494047 CPLX3Q8WVH0 158 aa12.8□□□□□ -0.36
RFC4-214ENST00000494047 CDK5RAP3Q96JB5 506 aa12.8□□□□□ -0.36
RFC4-214ENST00000494047 TRIM9Q9C026 710 aa12.8□□□□□ -0.36
RFC4-214ENST00000494047 FAM107BQ9H098 131 aa12.8□□□□□ -0.36
RFC4-214ENST00000494047 NT5C3AQ9H0P0 336 aa12.8□□□□□ -0.36
RFC4-214ENST00000494047 BLZF1Q9H2G9 400 aa12.8□□□□□ -0.36
RFC4-214ENST00000494047 L1RE1Q9UN81 338 aa12.8□□□□□ -0.36
RFC4-214ENST00000494047 IRS2Q9Y4H2 1338 aa12.8□□□□□ -0.36
RFC4-214ENST00000494047 TTC26A0AVF1 554 aa12.79□□□□□ -0.36
RFC4-214ENST00000494047 KLRC4O43908 158 aa12.79□□□□□ -0.36
RFC4-214ENST00000494047 RPS6KA5O75582 802 aa12.79□□□□□ -0.36
RFC4-214ENST00000494047 TCP1P17987 556 aaKnown RBP12.79□□□□□ -0.36
RFC4-214ENST00000494047 PRDX5P30044 214 aa12.79□□□□□ -0.36
RFC4-214ENST00000494047 ARHGAP25P42331 645 aa12.79□□□□□ -0.36
RFC4-214ENST00000494047 MTIF2P46199 727 aaKnown RBP12.79□□□□□ -0.36
RFC4-214ENST00000494047 AARSP49588 968 aaKnown RBP eCLIP12.79□□□□□ -0.36
RFC4-214ENST00000494047 EIF6P56537 245 aaKnown RBP12.79□□□□□ -0.36
RFC4-214ENST00000494047 PDE4DQ08499 809 aa12.79□□□□□ -0.36
RFC4-214ENST00000494047 GOLGA8FQ08AF8 430 aa12.79□□□□□ -0.36
RFC4-214ENST00000494047 GOLGA8DPQ0D2H9 430 aa12.79□□□□□ -0.36
RFC4-214ENST00000494047 TBC1D8BQ0IIM8 1120 aa12.79□□□□□ -0.36
RFC4-214ENST00000494047 FSTL1Q12841 308 aa12.79□□□□□ -0.36
RFC4-214ENST00000494047 ZNF572Q7Z3I7 529 aaPredicted RBP12.79□□□□□ -0.36
RFC4-214ENST00000494047 LARGE2Q8N3Y3 721 aa12.79□□□□□ -0.36
RFC4-214ENST00000494047 LRRN4CLQ8ND94 238 aa12.79□□□□□ -0.36
RFC4-214ENST00000494047 SYN2Q92777 582 aaPredicted RBP12.79□□□□□ -0.36
RFC4-214ENST00000494047 JAKMIP2Q96AA8 810 aa12.79□□□□□ -0.36
RFC4-214ENST00000494047 L3MBTL3Q96JM7 780 aaPredicted RBP12.79□□□□□ -0.36
RFC4-214ENST00000494047 TTYH3Q9C0H2 523 aa12.79□□□□□ -0.36
RFC4-214ENST00000494047 ANKZF1Q9H8Y5 726 aa12.79□□□□□ -0.36
RFC4-214ENST00000494047 BMP2KQ9NSY1 1161 aaPredicted RBP12.79□□□□□ -0.36
RFC4-214ENST00000494047 SWAP70Q9UH65 585 aa12.79□□□□□ -0.36
RFC4-214ENST00000494047 JRKLQ9Y4A0 524 aa12.79□□□□□ -0.36
RFC4-214ENST00000494047 ATP8B3O60423 1300 aa12.79□□□□□ -0.36
RFC4-214ENST00000494047 LRRC37AA6NMS7 1700 aa12.78□□□□□ -0.36
RFC4-214ENST00000494047 SCN4AP35499 1836 aa12.78□□□□□ -0.36
RFC4-214ENST00000494047 CDK5RAP2Q96SN8 1893 aa12.78□□□□□ -0.36
RFC4-214ENST00000494047 CYP2D7A0A087X1C5 515 aa12.78□□□□□ -0.36
RFC4-214ENST00000494047 KLRF2D3W0D1 207 aa12.78□□□□□ -0.36
RFC4-214ENST00000494047 ANXA13P27216 316 aa12.78□□□□□ -0.36
RFC4-214ENST00000494047 ASIC1P78348 528 aa12.78□□□□□ -0.36
RFC4-214ENST00000494047 SLC20A2Q08357 652 aa12.78□□□□□ -0.36
RFC4-214ENST00000494047 MTF1Q14872 753 aa12.78□□□□□ -0.36
RFC4-214ENST00000494047 MAN2A1Q16706 1144 aa12.78□□□□□ -0.36
RFC4-214ENST00000494047 NAALADL2Q58DX5 795 aa12.78□□□□□ -0.36
RFC4-214ENST00000494047 NOM1Q5C9Z4 860 aaKnown RBP12.78□□□□□ -0.36
RFC4-214ENST00000494047 FAM47AQ5JRC9 791 aa12.78□□□□□ -0.36
RFC4-214ENST00000494047 PPP4R3CPQ6ZMV5 832 aa12.78□□□□□ -0.36
RFC4-214ENST00000494047 FMNL3Q8IVF7 1028 aa12.78□□□□□ -0.36
RFC4-214ENST00000494047 SMYD4Q8IYR2 804 aaPredicted RBP12.78□□□□□ -0.36
RFC4-214ENST00000494047 GPC2Q8N158 579 aa12.78□□□□□ -0.36
RFC4-214ENST00000494047 RNF10Q8N5U6 811 aaKnown RBP12.78□□□□□ -0.36
RFC4-214ENST00000494047 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.78□□□□□ -0.36
RFC4-214ENST00000494047 SECISBP2LQ93073 1101 aaKnown RBP12.78□□□□□ -0.36
RFC4-214ENST00000494047 CNOT6LQ96LI5 555 aaKnown RBP12.78□□□□□ -0.36
RFC4-214ENST00000494047 PURBQ96QR8 312 aaKnown RBP12.78□□□□□ -0.36
RFC4-214ENST00000494047 MTRQ99707 1265 aa12.78□□□□□ -0.36
RFC4-214ENST00000494047 NOC4LQ9BVI4 516 aaKnown RBP12.78□□□□□ -0.36
RFC4-214ENST00000494047 PLAGL2Q9UPG8 496 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms