RNA–Protein interactions for RNA: ENST00000493940.2

HSPG2-212, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-212ENST00000493940 ZBTB5O15062 677 aa14.67□□□□□ -0.06
HSPG2-212ENST00000493940 PLEKHA8P1O95397 391 aa14.67□□□□□ -0.06
HSPG2-212ENST00000493940 CFBP00751 764 aa14.67□□□□□ -0.06
HSPG2-212ENST00000493940 CD4P01730 458 aa14.67□□□□□ -0.06
HSPG2-212ENST00000493940 HOXA13P31271 388 aaPredicted RBP14.67□□□□□ -0.06
HSPG2-212ENST00000493940 HSD17B4P51659 736 aa14.67□□□□□ -0.06
HSPG2-212ENST00000493940 GHRHRQ02643 423 aa14.67□□□□□ -0.06
HSPG2-212ENST00000493940 PDE4DQ08499 809 aa14.67□□□□□ -0.06
HSPG2-212ENST00000493940 CCDC62Q6P9F0 684 aa14.67□□□□□ -0.06
HSPG2-212ENST00000493940 FAM126BQ8IXS8 530 aa14.67□□□□□ -0.06
HSPG2-212ENST00000493940 IL31RAQ8NI17 732 aa14.67□□□□□ -0.06
HSPG2-212ENST00000493940 NUP133Q8WUM0 1156 aa14.67□□□□□ -0.06
HSPG2-212ENST00000493940 CCDC136Q96JN2 1154 aa14.67□□□□□ -0.06
HSPG2-212ENST00000493940 GLT1D1Q96MS3 346 aa14.67□□□□□ -0.06
HSPG2-212ENST00000493940 TOX2Q96NM4 488 aa14.67□□□□□ -0.06
HSPG2-212ENST00000493940 AMNQ9BXJ7 453 aa14.67□□□□□ -0.06
HSPG2-212ENST00000493940 AP5M1Q9H0R1 490 aa14.67□□□□□ -0.06
HSPG2-212ENST00000493940 TBX21Q9UL17 535 aa14.67□□□□□ -0.06
HSPG2-212ENST00000493940 MRPL11Q9Y3B7 192 aaKnown RBP14.67□□□□□ -0.06
HSPG2-212ENST00000493940 Q9Y3F1 56 aa14.67□□□□□ -0.06
HSPG2-212ENST00000493940 EYSQ5T1H1 3165 aa14.67□□□□□ -0.06
HSPG2-212ENST00000493940 CUL9Q8IWT3 2517 aa14.66□□□□□ -0.06
HSPG2-212ENST00000493940 LOC102724159A0A0B4J2E5 919 aa14.66□□□□□ -0.06
HSPG2-212ENST00000493940 RGS20O76081 388 aa14.66□□□□□ -0.06
HSPG2-212ENST00000493940 EIF2AK2P19525 551 aaKnown RBP14.66□□□□□ -0.06
HSPG2-212ENST00000493940 PWP2Q15269 919 aaKnown RBP14.66□□□□□ -0.06
HSPG2-212ENST00000493940 LY6KQ17RY6 165 aa14.66□□□□□ -0.06
HSPG2-212ENST00000493940 SRBD1Q8N5C6 995 aaKnown RBP14.66□□□□□ -0.06
HSPG2-212ENST00000493940 VTI1AQ96AJ9 217 aa14.66□□□□□ -0.06
HSPG2-212ENST00000493940 RMDN3Q96TC7 470 aa14.66□□□□□ -0.06
HSPG2-212ENST00000493940 LBHD1Q9BQE6 289 aaPredicted RBP14.66□□□□□ -0.06
HSPG2-212ENST00000493940 SPC25Q9HBM1 224 aa14.66□□□□□ -0.06
HSPG2-212ENST00000493940 PXMP2Q9NR77 195 aa14.66□□□□□ -0.06
HSPG2-212ENST00000493940 TMEM39AQ9NV64 488 aa14.66□□□□□ -0.06
HSPG2-212ENST00000493940 PNMA2Q9UL42 364 aa14.66□□□□□ -0.06
HSPG2-212ENST00000493940 PCDHA1Q9Y5I3 950 aa14.66□□□□□ -0.06
HSPG2-212ENST00000493940 UMODL1Q5DID0 1318 aa14.66□□□□□ -0.06
HSPG2-212ENST00000493940 hCG_1642624A0A1W2PR95 340 aa14.65□□□□□ -0.06
HSPG2-212ENST00000493940 ERICH2A1L162 156 aa14.65□□□□□ -0.06
HSPG2-212ENST00000493940 CPA1P15085 419 aa14.65□□□□□ -0.06
HSPG2-212ENST00000493940 MCM5P33992 734 aa14.65□□□□□ -0.06
HSPG2-212ENST00000493940 EXOSC10Q01780 885 aaKnown RBP14.65□□□□□ -0.06
HSPG2-212ENST00000493940 FAM109BQ6ICB4 259 aaPredicted RBP14.65□□□□□ -0.06
HSPG2-212ENST00000493940 C16orf59Q7L2K0 433 aa14.65□□□□□ -0.06
HSPG2-212ENST00000493940 CATIPQ7Z7H3 387 aa14.65□□□□□ -0.06
HSPG2-212ENST00000493940 GPKOWQ92917 476 aaPredicted RBP eCLIP14.65□□□□□ -0.06
HSPG2-212ENST00000493940 TRPV6Q9H1D0 765 aa14.65□□□□□ -0.06
HSPG2-212ENST00000493940 BCAS3Q9H6U6 928 aa14.65□□□□□ -0.06
HSPG2-212ENST00000493940 PRKAG2Q9UGJ0 569 aa14.65□□□□□ -0.06
HSPG2-212ENST00000493940 PNMA6FA0A0J9YX94 578 aa14.64□□□□□ -0.07
HSPG2-212ENST00000493940 A0A0U1RQG5 324 aaPredicted RBP14.64□□□□□ -0.07
HSPG2-212ENST00000493940 CDC45O75419 566 aa14.64□□□□□ -0.07
HSPG2-212ENST00000493940 NR3C2P08235 984 aa14.64□□□□□ -0.07
HSPG2-212ENST00000493940 TXNP10599 105 aaKnown RBP14.64□□□□□ -0.07
HSPG2-212ENST00000493940 PURAQ00577 322 aaKnown RBP14.64□□□□□ -0.07
HSPG2-212ENST00000493940 ITGA7Q13683 1181 aa14.64□□□□□ -0.07
HSPG2-212ENST00000493940 SEPT14Q6ZU15 432 aa14.64□□□□□ -0.07
HSPG2-212ENST00000493940 MCF2L2Q86YR7 1114 aa14.64□□□□□ -0.07
HSPG2-212ENST00000493940 OR6J1Q8NGC5 347 aa14.64□□□□□ -0.07
HSPG2-212ENST00000493940 NSUN6Q8TEA1 469 aaKnown RBP14.64□□□□□ -0.07
HSPG2-212ENST00000493940 VWCEQ96DN2 955 aa14.64□□□□□ -0.07
HSPG2-212ENST00000493940 PDCD2LQ9BRP1 358 aa14.64□□□□□ -0.07
HSPG2-212ENST00000493940 BRPF3Q9ULD4 1205 aa14.64□□□□□ -0.07
HSPG2-212ENST00000493940 UNC80Q8N2C7 3258 aa14.63□□□□□ -0.07
HSPG2-212ENST00000493940 PTPRSQ13332 1948 aa14.63□□□□□ -0.07
HSPG2-212ENST00000493940 A6NJR5 290 aa14.63□□□□□ -0.07
HSPG2-212ENST00000493940 DCDC2CA8MYV0 355 aa14.63□□□□□ -0.07
HSPG2-212ENST00000493940 B4GALT4O60513 344 aa14.63□□□□□ -0.07
HSPG2-212ENST00000493940 TIMP1P01033 207 aa14.63□□□□□ -0.07
HSPG2-212ENST00000493940 RAG1P15918 1043 aa14.63□□□□□ -0.07
HSPG2-212ENST00000493940 CYP2C18P33260 490 aa14.63□□□□□ -0.07
HSPG2-212ENST00000493940 LIFRP42702 1097 aa14.63□□□□□ -0.07
HSPG2-212ENST00000493940 ARHGAP1Q07960 439 aa14.63□□□□□ -0.07
HSPG2-212ENST00000493940 SART3Q15020 963 aaKnown RBP14.63□□□□□ -0.07
HSPG2-212ENST00000493940 CASC1Q6TDU7 716 aa14.63□□□□□ -0.07
HSPG2-212ENST00000493940 SCFD2Q8WU76 684 aa14.63□□□□□ -0.07
HSPG2-212ENST00000493940 TMEM87BQ96K49 555 aa14.63□□□□□ -0.07
HSPG2-212ENST00000493940 MAP3K14Q99558 947 aa14.63□□□□□ -0.07
HSPG2-212ENST00000493940 MTA3Q9BTC8 594 aa14.63□□□□□ -0.07
HSPG2-212ENST00000493940 KAT6AQ92794 2004 aa14.63□□□□□ -0.07
HSPG2-212ENST00000493940 DDAH1O94760 285 aa14.62□□□□□ -0.07
HSPG2-212ENST00000493940 MYL3P08590 195 aa14.62□□□□□ -0.07
HSPG2-212ENST00000493940 SP2Q02086 613 aa14.62□□□□□ -0.07
HSPG2-212ENST00000493940 PGM5Q15124 567 aa14.62□□□□□ -0.07
HSPG2-212ENST00000493940 PPP2R5BQ15173 497 aa14.62□□□□□ -0.07
HSPG2-212ENST00000493940 STXBP2Q15833 593 aa14.62□□□□□ -0.07
HSPG2-212ENST00000493940 TSGA10IPQ3SY00 556 aa14.62□□□□□ -0.07
HSPG2-212ENST00000493940 ARHGEF16Q5VV41 709 aa14.62□□□□□ -0.07
HSPG2-212ENST00000493940 FCHSD1Q86WN1 690 aa14.62□□□□□ -0.07
HSPG2-212ENST00000493940 CCDC82Q8N4S0 544 aa14.62□□□□□ -0.07
HSPG2-212ENST00000493940 KCNB2Q92953 911 aa14.62□□□□□ -0.07
HSPG2-212ENST00000493940 IWS1Q96ST2 819 aa14.62□□□□□ -0.07
HSPG2-212ENST00000493940 SPZ1Q9BXG8 430 aa14.62□□□□□ -0.07
HSPG2-212ENST00000493940 PPP1R12CQ9BZL4 782 aa14.62□□□□□ -0.07
HSPG2-212ENST00000493940 MAF1Q9H063 256 aa14.62□□□□□ -0.07
HSPG2-212ENST00000493940 DDX41Q9UJV9 622 aaKnown RBP14.62□□□□□ -0.07
HSPG2-212ENST00000493940 TELO2Q9Y4R8 837 aa14.62□□□□□ -0.07
HSPG2-212ENST00000493940 SORBS3O60504 671 aa14.61□□□□□ -0.07
HSPG2-212ENST00000493940 MYCLP12524 364 aaPredicted RBP14.61□□□□□ -0.07
HSPG2-212ENST00000493940 CSF2RAP15509 400 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms