RNA–Protein interactions for RNA: ENST00000493695.1

SMC4-223, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-223ENST00000493695 MYRFQ9Y2G1 1151 aa7.29□□□□□ -1.24
SMC4-223ENST00000493695 RACK1P63244 317 aaKnown RBP7.28□□□□□ -1.24
SMC4-223ENST00000493695 PAK2Q13177 524 aa7.28□□□□□ -1.24
SMC4-223ENST00000493695 CD300LDQ6UXZ3 194 aa7.28□□□□□ -1.24
SMC4-223ENST00000493695 STK32CQ86UX6 486 aa7.28□□□□□ -1.24
SMC4-223ENST00000493695 ZNF761Q86XN6 746 aaPredicted RBP7.28□□□□□ -1.24
SMC4-223ENST00000493695 CPLX3Q8WVH0 158 aa7.28□□□□□ -1.24
SMC4-223ENST00000493695 CPA5Q8WXQ8 436 aa7.28□□□□□ -1.24
SMC4-223ENST00000493695 AP5M1Q9H0R1 490 aa7.28□□□□□ -1.24
SMC4-223ENST00000493695 METTL5Q9NRN9 209 aaKnown RBP7.28□□□□□ -1.24
SMC4-223ENST00000493695 SPATA6Q9NWH7 488 aaPredicted RBP7.28□□□□□ -1.24
SMC4-223ENST00000493695 MARCH2Q9P0N8 246 aa7.28□□□□□ -1.24
SMC4-223ENST00000493695 CNOT11Q9UKZ1 510 aaKnown RBP7.28□□□□□ -1.24
SMC4-223ENST00000493695 AKT3Q9Y243 479 aa7.28□□□□□ -1.24
SMC4-223ENST00000493695 ZNF536O15090 1300 aa7.27□□□□□ -1.24
SMC4-223ENST00000493695 C7orf72A4D263 438 aa7.27□□□□□ -1.25
SMC4-223ENST00000493695 RGL3Q3MIN7 710 aa7.27□□□□□ -1.25
SMC4-223ENST00000493695 FAM124AQ86V42 546 aa7.27□□□□□ -1.25
SMC4-223ENST00000493695 ADAMTS17Q8TE56 1095 aa7.27□□□□□ -1.25
SMC4-223ENST00000493695 MTA3Q9BTC8 594 aa7.27□□□□□ -1.25
SMC4-223ENST00000493695 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.27□□□□□ -1.25
SMC4-223ENST00000493695 DDX41Q9UJV9 622 aaKnown RBP7.27□□□□□ -1.25
SMC4-223ENST00000493695 KCNH1O95259 989 aa7.26□□□□□ -1.25
SMC4-223ENST00000493695 COL9A2Q14055 689 aaPredicted RBP7.26□□□□□ -1.25
SMC4-223ENST00000493695 KIAA1211LQ6NV74 962 aa7.26□□□□□ -1.25
SMC4-223ENST00000493695 ETV3LQ6ZN32 361 aa7.26□□□□□ -1.25
SMC4-223ENST00000493695 DCP2Q8IU60 420 aaKnown RBP7.26□□□□□ -1.25
SMC4-223ENST00000493695 ZNF654Q8IZM8 581 aa7.26□□□□□ -1.25
SMC4-223ENST00000493695 CHST13Q8NET6 341 aa7.26□□□□□ -1.25
SMC4-223ENST00000493695 GPRC5CQ9NQ84 441 aa7.26□□□□□ -1.25
SMC4-223ENST00000493695 A0A1W2PQH9 124 aa7.25□□□□□ -1.25
SMC4-223ENST00000493695 ITGB3P05106 788 aa7.25□□□□□ -1.25
SMC4-223ENST00000493695 PLS3P13797 630 aa7.25□□□□□ -1.25
SMC4-223ENST00000493695 KIAA2012Q0VF49 1180 aa7.25□□□□□ -1.25
SMC4-223ENST00000493695 MCTP2Q6DN12 878 aa7.25□□□□□ -1.25
SMC4-223ENST00000493695 SYT3Q9BQG1 590 aa7.25□□□□□ -1.25
SMC4-223ENST00000493695 GORASP1Q9BQQ3 440 aa7.25□□□□□ -1.25
SMC4-223ENST00000493695 YIPF4Q9BSR8 244 aa7.25□□□□□ -1.25
SMC4-223ENST00000493695 C8BP07358 591 aa7.24□□□□□ -1.25
SMC4-223ENST00000493695 ADAM17P78536 824 aa7.24□□□□□ -1.25
SMC4-223ENST00000493695 SCRN1Q12765 414 aa7.24□□□□□ -1.25
SMC4-223ENST00000493695 GRB10Q13322 594 aa7.24□□□□□ -1.25
SMC4-223ENST00000493695 BORAQ6PGQ7 559 aa7.24□□□□□ -1.25
SMC4-223ENST00000493695 VHLLQ6RSH7 139 aa7.24□□□□□ -1.25
SMC4-223ENST00000493695 ZC3H18Q86VM9 953 aaKnown RBP7.24□□□□□ -1.25
SMC4-223ENST00000493695 TEX2Q8IWB9 1127 aa7.24□□□□□ -1.25
SMC4-223ENST00000493695 ARHGEF39Q8N4T4 335 aa7.24□□□□□ -1.25
SMC4-223ENST00000493695 FAM26EQ8N5C1 309 aa7.24□□□□□ -1.25
SMC4-223ENST00000493695 SPATA32Q96LK8 384 aa7.24□□□□□ -1.25
SMC4-223ENST00000493695 C8orf49Q96NF6 230 aa7.24□□□□□ -1.25
SMC4-223ENST00000493695 NOP56O00567 594 aaKnown RBP7.23□□□□□ -1.25
SMC4-223ENST00000493695 CRACR2BQ8N4Y2 399 aaPredicted RBP7.23□□□□□ -1.25
SMC4-223ENST00000493695 OR6P1Q8NGX9 317 aa7.23□□□□□ -1.25
SMC4-223ENST00000493695 RCC1LQ96I51 464 aaKnown RBP7.23□□□□□ -1.25
SMC4-223ENST00000493695 C11orf84Q9BUA3 381 aaPredicted RBP7.23□□□□□ -1.25
SMC4-223ENST00000493695 ANKRD34BA5PLL1 514 aa7.22□□□□□ -1.25
SMC4-223ENST00000493695 C22orf46C9J442 243 aa7.22□□□□□ -1.25
SMC4-223ENST00000493695 GIPRP48546 466 aa7.22□□□□□ -1.25
SMC4-223ENST00000493695 ZXDAP98168 799 aa7.22□□□□□ -1.25
SMC4-223ENST00000493695 POMZP3Q6PJE2 187 aa7.22□□□□□ -1.25
SMC4-223ENST00000493695 GLB1LQ6UWU2 654 aa7.22□□□□□ -1.25
SMC4-223ENST00000493695 MILR1Q7Z6M3 343 aa7.22□□□□□ -1.25
SMC4-223ENST00000493695 LGI4Q8N135 537 aa7.22□□□□□ -1.25
SMC4-223ENST00000493695 KLHL6Q8WZ60 621 aa7.22□□□□□ -1.25
SMC4-223ENST00000493695 GPRASP2Q96D09 838 aa7.22□□□□□ -1.25
SMC4-223ENST00000493695 APBA2Q99767 749 aa7.22□□□□□ -1.25
SMC4-223ENST00000493695 APEX2Q9UBZ4 518 aa7.22□□□□□ -1.25
SMC4-223ENST00000493695 INVSQ9Y283 1065 aa7.22□□□□□ -1.25
SMC4-223ENST00000493695 MROH6A6NGR9 719 aa7.21□□□□□ -1.26
SMC4-223ENST00000493695 DDX3XO00571 662 aaKnown RBP eCLIP7.21□□□□□ -1.26
SMC4-223ENST00000493695 PLATP00750 562 aa7.21□□□□□ -1.26
SMC4-223ENST00000493695 FSHBP01225 129 aa7.21□□□□□ -1.26
SMC4-223ENST00000493695 THBDP07204 575 aa7.21□□□□□ -1.26
SMC4-223ENST00000493695 RPL13P26373 211 aaKnown RBP7.21□□□□□ -1.26
SMC4-223ENST00000493695 THBS2P35442 1172 aa7.21□□□□□ -1.26
SMC4-223ENST00000493695 RBM10P98175 930 aaKnown RBP7.21□□□□□ -1.26
SMC4-223ENST00000493695 TMCO4Q5TGY1 634 aa7.21□□□□□ -1.26
SMC4-223ENST00000493695 PRAMEF18Q5VWM3 479 aa7.21□□□□□ -1.26
SMC4-223ENST00000493695 CPZQ66K79 652 aa7.21□□□□□ -1.26
SMC4-223ENST00000493695 LINC00482Q8N8I6 264 aa7.21□□□□□ -1.26
SMC4-223ENST00000493695 C19orf47Q8N9M1 422 aaKnown RBP7.21□□□□□ -1.26
SMC4-223ENST00000493695 KYQ8NBH2 561 aa7.21□□□□□ -1.26
SMC4-223ENST00000493695 PCDH18Q9HCL0 1135 aa7.21□□□□□ -1.26
SMC4-223ENST00000493695 CYP1A1P04798 512 aaPredicted RBP7.2□□□□□ -1.26
SMC4-223ENST00000493695 STAT5AP42229 794 aa7.2□□□□□ -1.26
SMC4-223ENST00000493695 SOX9P48436 509 aa7.2□□□□□ -1.26
SMC4-223ENST00000493695 NASPP49321 788 aaPredicted RBP7.2□□□□□ -1.26
SMC4-223ENST00000493695 TBC1D10BQ4KMP7 808 aaPredicted RBP7.2□□□□□ -1.26
SMC4-223ENST00000493695 MBLAC2Q68D91 279 aa7.2□□□□□ -1.26
SMC4-223ENST00000493695 BVESQ8NE79 360 aa7.2□□□□□ -1.26
SMC4-223ENST00000493695 PLEKHO2Q8TD55 490 aa7.2□□□□□ -1.26
SMC4-223ENST00000493695 SCAMP3O14828 347 aaKnown RBP7.19□□□□□ -1.26
SMC4-223ENST00000493695 SGSM2O43147 1006 aa7.19□□□□□ -1.26
SMC4-223ENST00000493695 NAT2P11245 290 aa7.19□□□□□ -1.26
SMC4-223ENST00000493695 FPR2P25090 351 aa7.19□□□□□ -1.26
SMC4-223ENST00000493695 TTLL6Q8N841 843 aa7.19□□□□□ -1.26
SMC4-223ENST00000493695 SEC14L1Q92503 715 aa7.19□□□□□ -1.26
SMC4-223ENST00000493695 DPF3Q92784 378 aa7.19□□□□□ -1.26
SMC4-223ENST00000493695 TRMT2BQ96GJ1 504 aaKnown RBP7.19□□□□□ -1.26
SMC4-223ENST00000493695 CHAMP1Q96JM3 812 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms