RNA–Protein interactions for RNA: ENST00000493618.5

ATG4B-223, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-223ENST00000493618 CCL23P55773 120 aa17.07■□□□□ 0.32
ATG4B-223ENST00000493618 TMEM240Q5SV17 173 aa17.07■□□□□ 0.32
ATG4B-223ENST00000493618 SEPT14Q6ZU15 432 aa17.07■□□□□ 0.32
ATG4B-223ENST00000493618 STOX1Q6ZVD7 989 aa17.07■□□□□ 0.32
ATG4B-223ENST00000493618 SCFD2Q8WU76 684 aa17.07■□□□□ 0.32
ATG4B-223ENST00000493618 HIPK3Q9H422 1215 aa17.07■□□□□ 0.32
ATG4B-223ENST00000493618 POLR3EQ9NVU0 708 aa17.07■□□□□ 0.32
ATG4B-223ENST00000493618 MRPL11Q9Y3B7 192 aaKnown RBP17.07■□□□□ 0.32
ATG4B-223ENST00000493618 EYSQ5T1H1 3165 aa17.06■□□□□ 0.32
ATG4B-223ENST00000493618 DOCK5Q9H7D0 1870 aa17.06■□□□□ 0.32
ATG4B-223ENST00000493618 B4DLN1 442 aa17.06■□□□□ 0.32
ATG4B-223ENST00000493618 PPP1R11O60927 126 aaPredicted RBP17.06■□□□□ 0.32
ATG4B-223ENST00000493618 CFBP00751 764 aa17.06■□□□□ 0.32
ATG4B-223ENST00000493618 MRPL12P52815 198 aaKnown RBP17.06■□□□□ 0.32
ATG4B-223ENST00000493618 PURAQ00577 322 aaKnown RBP17.06■□□□□ 0.32
ATG4B-223ENST00000493618 RALYLQ86SE5 291 aaKnown RBP17.06■□□□□ 0.32
ATG4B-223ENST00000493618 HOMER1Q86YM7 354 aa17.06■□□□□ 0.32
ATG4B-223ENST00000493618 MCF2L2Q86YR7 1114 aa17.06■□□□□ 0.32
ATG4B-223ENST00000493618 CDX2Q99626 313 aaPredicted RBP17.06■□□□□ 0.32
ATG4B-223ENST00000493618 TRMT13Q9NUP7 481 aaKnown RBP17.06■□□□□ 0.32
ATG4B-223ENST00000493618 TRIP12Q14669 1992 aaPredicted RBP17.06■□□□□ 0.32
ATG4B-223ENST00000493618 TANC1Q9C0D5 1861 aa17.05■□□□□ 0.32
ATG4B-223ENST00000493618 PALM3A6NDB9 673 aaPredicted RBP17.05■□□□□ 0.32
ATG4B-223ENST00000493618 GRXCR1A8MXD5 290 aa17.05■□□□□ 0.32
ATG4B-223ENST00000493618 EIF2AK2P19525 551 aaKnown RBP17.05■□□□□ 0.32
ATG4B-223ENST00000493618 CHMP4BP1P59074 171 aa17.05■□□□□ 0.32
ATG4B-223ENST00000493618 TTLL4Q14679 1199 aa17.05■□□□□ 0.32
ATG4B-223ENST00000493618 GRM4Q14833 912 aa17.05■□□□□ 0.32
ATG4B-223ENST00000493618 LY6KQ17RY6 165 aa17.05■□□□□ 0.32
ATG4B-223ENST00000493618 SLC35G1Q2M3R5 365 aa17.05■□□□□ 0.32
ATG4B-223ENST00000493618 FAM47CQ5HY64 1035 aa17.05■□□□□ 0.32
ATG4B-223ENST00000493618 ZNF365Q70YC5 407 aa17.05■□□□□ 0.32
ATG4B-223ENST00000493618 SKAP1Q86WV1 359 aa17.05■□□□□ 0.32
ATG4B-223ENST00000493618 NCOA7Q8NI08 942 aa17.05■□□□□ 0.32
ATG4B-223ENST00000493618 MYLIPQ8WY64 445 aa17.05■□□□□ 0.32
ATG4B-223ENST00000493618 RMDN3Q96TC7 470 aa17.05■□□□□ 0.32
ATG4B-223ENST00000493618 MTG1Q9BT17 334 aaPredicted RBP17.05■□□□□ 0.32
ATG4B-223ENST00000493618 NOC4LQ9BVI4 516 aaKnown RBP17.05■□□□□ 0.32
ATG4B-223ENST00000493618 AMNQ9BXJ7 453 aa17.05■□□□□ 0.32
ATG4B-223ENST00000493618 ALDH8A1Q9H2A2 487 aaPredicted RBP17.05■□□□□ 0.32
ATG4B-223ENST00000493618 GPHNQ9NQX3 736 aaPredicted RBP17.05■□□□□ 0.32
ATG4B-223ENST00000493618 RBM8AQ9Y5S9 174 aaKnown RBP17.05■□□□□ 0.32
ATG4B-223ENST00000493618 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.04■□□□□ 0.32
ATG4B-223ENST00000493618 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.04■□□□□ 0.32
ATG4B-223ENST00000493618 ERICH2A1L162 156 aa17.04■□□□□ 0.32
ATG4B-223ENST00000493618 OPLAHO14841 1288 aa17.04■□□□□ 0.32
ATG4B-223ENST00000493618 NKRFO15226 690 aaKnown RBP eCLIP17.04■□□□□ 0.329e-11■■□□□ 11.5
ATG4B-223ENST00000493618 CYP2C9P11712 490 aa17.04■□□□□ 0.32
ATG4B-223ENST00000493618 WTAPQ15007 396 aa17.04■□□□□ 0.32
ATG4B-223ENST00000493618 NBPF20Q3BBV1 942 aa17.04■□□□□ 0.32
ATG4B-223ENST00000493618 ARHGEF16Q5VV41 709 aa17.04■□□□□ 0.32
ATG4B-223ENST00000493618 NSUN6Q8TEA1 469 aaKnown RBP17.04■□□□□ 0.32
ATG4B-223ENST00000493618 SCLYQ96I15 445 aa17.04■□□□□ 0.32
ATG4B-223ENST00000493618 PIGSQ96S52 555 aa17.04■□□□□ 0.32
ATG4B-223ENST00000493618 WNT8AQ9H1J5 351 aa17.04■□□□□ 0.32
ATG4B-223ENST00000493618 IL23AQ9NPF7 189 aa17.04■□□□□ 0.32
ATG4B-223ENST00000493618 ZBTB5O15062 677 aa17.03■□□□□ 0.32
ATG4B-223ENST00000493618 DNAJB2P25686 324 aa17.03■□□□□ 0.32
ATG4B-223ENST00000493618 HOXA13P31271 388 aaPredicted RBP17.03■□□□□ 0.32
ATG4B-223ENST00000493618 PBX2P40425 430 aa17.03■□□□□ 0.32
ATG4B-223ENST00000493618 ANTXR2P58335 489 aa17.03■□□□□ 0.32
ATG4B-223ENST00000493618 STXBP2Q15833 593 aa17.03■□□□□ 0.32
ATG4B-223ENST00000493618 BRDTQ58F21 947 aaPredicted RBP17.03■□□□□ 0.32
ATG4B-223ENST00000493618 TMEM67Q5HYA8 995 aa17.03■□□□□ 0.32
ATG4B-223ENST00000493618 CCDC62Q6P9F0 684 aa17.03■□□□□ 0.32
ATG4B-223ENST00000493618 PIBF1Q8WXW3 757 aa17.03■□□□□ 0.32
ATG4B-223ENST00000493618 MAP4K1Q92918 833 aa17.03■□□□□ 0.32
ATG4B-223ENST00000493618 MTMR8Q96EF0 704 aa17.03■□□□□ 0.32
ATG4B-223ENST00000493618 PXMP2Q9NR77 195 aa17.03■□□□□ 0.32
ATG4B-223ENST00000493618 PCDHA1Q9Y5I3 950 aa17.03■□□□□ 0.32
ATG4B-223ENST00000493618 CDH23Q9H251 3354 aa17.02■□□□□ 0.32
ATG4B-223ENST00000493618 A6NJR5 290 aa17.02■□□□□ 0.32
ATG4B-223ENST00000493618 SORBS3O60504 671 aa17.02■□□□□ 0.32
ATG4B-223ENST00000493618 MYCLP12524 364 aaPredicted RBP17.02■□□□□ 0.32
ATG4B-223ENST00000493618 HSD17B4P51659 736 aa17.02■□□□□ 0.32
ATG4B-223ENST00000493618 PSRC1Q6PGN9 363 aaPredicted RBP17.02■□□□□ 0.32
ATG4B-223ENST00000493618 MB21D2Q8IYB1 491 aaPredicted RBP17.02■□□□□ 0.32
ATG4B-223ENST00000493618 AFG1LQ8WV93 481 aa17.02■□□□□ 0.32
ATG4B-223ENST00000493618 ZFP91Q96JP5 570 aaPredicted RBP17.02■□□□□ 0.32
ATG4B-223ENST00000493618 IWS1Q96ST2 819 aa17.02■□□□□ 0.32
ATG4B-223ENST00000493618 SEZ6LQ9BYH1 1024 aa17.02■□□□□ 0.32
ATG4B-223ENST00000493618 CXXC1Q9P0U4 656 aaPredicted RBP17.02■□□□□ 0.32
ATG4B-223ENST00000493618 A0A0C4DFX4 3053 aa17.02■□□□□ 0.31
ATG4B-223ENST00000493618 GH1P01241 217 aa17.01■□□□□ 0.31
ATG4B-223ENST00000493618 FGBP02675 491 aa17.01■□□□□ 0.31
ATG4B-223ENST00000493618 NR3C2P08235 984 aa17.01■□□□□ 0.31
ATG4B-223ENST00000493618 MMP3P08254 477 aa17.01■□□□□ 0.31
ATG4B-223ENST00000493618 ARHGAP1Q07960 439 aa17.01■□□□□ 0.31
ATG4B-223ENST00000493618 SART3Q15020 963 aaKnown RBP17.01■□□□□ 0.31
ATG4B-223ENST00000493618 RASIP1Q5U651 963 aa17.01■□□□□ 0.31
ATG4B-223ENST00000493618 OTOP2Q7RTS6 562 aa17.01■□□□□ 0.31
ATG4B-223ENST00000493618 MYL10Q9BUA6 226 aa17.01■□□□□ 0.31
ATG4B-223ENST00000493618 UNC80Q8N2C7 3258 aa17.01■□□□□ 0.31
ATG4B-223ENST00000493618 CUL9Q8IWT3 2517 aa17■□□□□ 0.31
ATG4B-223ENST00000493618 CYTH3O43739 400 aa17■□□□□ 0.31
ATG4B-223ENST00000493618 KPNA6O60684 536 aa17■□□□□ 0.31
ATG4B-223ENST00000493618 TROAPQ12815 778 aa17■□□□□ 0.31
ATG4B-223ENST00000493618 COL9A3Q14050 684 aaPredicted RBP17■□□□□ 0.31
ATG4B-223ENST00000493618 GRIN2CQ14957 1233 aa17■□□□□ 0.31
ATG4B-223ENST00000493618 CATIPQ7Z7H3 387 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms