RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 SLC16A2P36021 539 aa20.83■□□□□ 0.93
NUP50-218ENST00000493456 C20orf194Q5TEA3 1177 aa20.83■□□□□ 0.93
NUP50-218ENST00000493456 TTBK2Q6IQ55 1244 aa20.83■□□□□ 0.93
NUP50-218ENST00000493456 RNF207Q6ZRF8 634 aa20.83■□□□□ 0.93
NUP50-218ENST00000493456 CCDC155Q8N6L0 562 aa20.83■□□□□ 0.93
NUP50-218ENST00000493456 B4DLN1 442 aa20.82■□□□□ 0.92
NUP50-218ENST00000493456 TLL1O43897 1013 aa20.82■□□□□ 0.92
NUP50-218ENST00000493456 HOXD11P31277 338 aaPredicted RBP20.82■□□□□ 0.92
NUP50-218ENST00000493456 KCNJ6P48051 423 aa20.82■□□□□ 0.92
NUP50-218ENST00000493456 MRPL12P52815 198 aaKnown RBP20.82■□□□□ 0.92
NUP50-218ENST00000493456 KRT40Q6A162 431 aa20.82■□□□□ 0.92
NUP50-218ENST00000493456 MIER1Q8N108 512 aa20.82■□□□□ 0.92
NUP50-218ENST00000493456 CAGE1Q8TC20 777 aa20.82■□□□□ 0.92
NUP50-218ENST00000493456 CLEC4DQ8WXI8 215 aa20.82■□□□□ 0.92
NUP50-218ENST00000493456 INCENPQ9NQS7 918 aa20.82■□□□□ 0.92
NUP50-218ENST00000493456 ARHGEF15O94989 841 aa20.81■□□□□ 0.92
NUP50-218ENST00000493456 FGRP09769 529 aa20.81■□□□□ 0.92
NUP50-218ENST00000493456 TOP1P11387 765 aaKnown RBP20.81■□□□□ 0.92
NUP50-218ENST00000493456 RPS6P62753 249 aaKnown RBP20.81■□□□□ 0.92
NUP50-218ENST00000493456 GRB10Q13322 594 aa20.81■□□□□ 0.92
NUP50-218ENST00000493456 AFAP1L1Q8TED9 768 aa20.81■□□□□ 0.92
NUP50-218ENST00000493456 LRFN3Q9BTN0 628 aa20.81■□□□□ 0.92
NUP50-218ENST00000493456 LMCD1Q9NZU5 365 aa20.81■□□□□ 0.92
NUP50-218ENST00000493456 WDR19Q8NEZ3 1342 aa20.8■□□□□ 0.92
NUP50-218ENST00000493456 COL4A4P53420 1690 aaPredicted RBP20.8■□□□□ 0.92
NUP50-218ENST00000493456 TXNP10599 105 aaKnown RBP20.8■□□□□ 0.92
NUP50-218ENST00000493456 TMEM31Q5JXX7 168 aa20.8■□□□□ 0.92
NUP50-218ENST00000493456 TMEM47Q9BQJ4 181 aa20.8■□□□□ 0.92
NUP50-218ENST00000493456 EPHX3Q9H6B9 360 aa20.8■□□□□ 0.92
NUP50-218ENST00000493456 TCP11L1Q9NUJ3 509 aa20.8■□□□□ 0.92
NUP50-218ENST00000493456 FRMPD2Q68DX3 1309 aaPredicted RBP20.79■□□□□ 0.92
NUP50-218ENST00000493456 LPXNO60711 386 aa20.79■□□□□ 0.92
NUP50-218ENST00000493456 PARNO95453 639 aaKnown RBP20.79■□□□□ 0.92
NUP50-218ENST00000493456 SESTD1Q86VW0 696 aa20.79■□□□□ 0.92
NUP50-218ENST00000493456 COPS5Q92905 334 aa20.79■□□□□ 0.92
NUP50-218ENST00000493456 GPCPD1Q9NPB8 672 aa20.79■□□□□ 0.92
NUP50-218ENST00000493456 PDHBP11177 359 aa20.78■□□□□ 0.92
NUP50-218ENST00000493456 WDR5P61964 334 aaKnown RBP20.78■□□□□ 0.92
NUP50-218ENST00000493456 ALX1Q15699 326 aa20.78■□□□□ 0.92
NUP50-218ENST00000493456 PTGISQ16647 500 aa20.78■□□□□ 0.92
NUP50-218ENST00000493456 TOMM22Q9NS69 142 aa20.78■□□□□ 0.92
NUP50-218ENST00000493456 MX1P20591 662 aa20.77■□□□□ 0.92
NUP50-218ENST00000493456 VPS53Q5VIR6 699 aa20.77■□□□□ 0.92
NUP50-218ENST00000493456 RGS22Q8NE09 1264 aa20.77■□□□□ 0.92
NUP50-218ENST00000493456 PPP1R13LQ8WUF5 828 aa20.77■□□□□ 0.92
NUP50-218ENST00000493456 MAF1Q9H063 256 aa20.77■□□□□ 0.92
NUP50-218ENST00000493456 GPR37L1O60883 481 aa20.76■□□□□ 0.91
NUP50-218ENST00000493456 ARIH2O95376 493 aa20.76■□□□□ 0.91
NUP50-218ENST00000493456 SELPP16109 830 aa20.76■□□□□ 0.91
NUP50-218ENST00000493456 RBL2Q08999 1139 aa20.76■□□□□ 0.91
NUP50-218ENST00000493456 ZNF543Q08ER8 600 aa20.76■□□□□ 0.91
NUP50-218ENST00000493456 CNKSR3Q6P9H4 555 aa20.76■□□□□ 0.91
NUP50-218ENST00000493456 LRRC8DQ7L1W4 858 aa20.76■□□□□ 0.91
NUP50-218ENST00000493456 TET1Q8NFU7 2136 aa20.76■□□□□ 0.91
NUP50-218ENST00000493456 ZBED2Q9BTP6 218 aa20.76■□□□□ 0.91
NUP50-218ENST00000493456 PTPRSQ13332 1948 aa20.76■□□□□ 0.91
NUP50-218ENST00000493456 LCHNA4D1U4 455 aa20.75■□□□□ 0.91
NUP50-218ENST00000493456 CXCL10P02778 98 aa20.75■□□□□ 0.91
NUP50-218ENST00000493456 MMP3P08254 477 aa20.75■□□□□ 0.91
NUP50-218ENST00000493456 SNHG28P0DPA3 235 aa20.75■□□□□ 0.91
NUP50-218ENST00000493456 CHMP4BP1P59074 171 aa20.75■□□□□ 0.91
NUP50-218ENST00000493456 RRP12Q5JTH9 1297 aaKnown RBP20.75■□□□□ 0.91
NUP50-218ENST00000493456 CCDC62Q6P9F0 684 aa20.75■□□□□ 0.91
NUP50-218ENST00000493456 OTUD7AQ8TE49 926 aaPredicted RBP20.75■□□□□ 0.91
NUP50-218ENST00000493456 GDPD5Q8WTR4 605 aa20.75■□□□□ 0.91
NUP50-218ENST00000493456 TTC14Q96N46 770 aa20.75■□□□□ 0.91
NUP50-218ENST00000493456 HELLSQ9NRZ9 838 aa20.75■□□□□ 0.91
NUP50-218ENST00000493456 ZMYM6O95789 1325 aa20.75■□□□□ 0.91
NUP50-218ENST00000493456 EFCAB14O75071 495 aa20.74■□□□□ 0.91
NUP50-218ENST00000493456 GH1P01241 217 aa20.74■□□□□ 0.91
NUP50-218ENST00000493456 GDF6Q6KF10 455 aaPredicted RBP20.74■□□□□ 0.91
NUP50-218ENST00000493456 SPRED2Q7Z698 418 aa20.74■□□□□ 0.91
NUP50-218ENST00000493456 AFG1LQ8WV93 481 aa20.74■□□□□ 0.91
NUP50-218ENST00000493456 CTAGE1Q96RT6 745 aa20.74■□□□□ 0.91
NUP50-218ENST00000493456 RAD9AQ99638 391 aa20.74■□□□□ 0.91
NUP50-218ENST00000493456 ABHD14A-ACY1A0A1B0GW23 586 aa20.73■□□□□ 0.91
NUP50-218ENST00000493456 GJB5O95377 273 aa20.73■□□□□ 0.91
NUP50-218ENST00000493456 PCP11498 1178 aaKnown RBP20.73■□□□□ 0.91
NUP50-218ENST00000493456 CASTP20810 708 aaKnown RBP20.73■□□□□ 0.91
NUP50-218ENST00000493456 DEFB103AP81534 67 aa20.73■□□□□ 0.91
NUP50-218ENST00000493456 GPNMBQ14956 572 aa20.73■□□□□ 0.91
NUP50-218ENST00000493456 GPATCH4Q5T3I0 446 aaKnown RBP20.73■□□□□ 0.91
NUP50-218ENST00000493456 EVI5LQ96CN4 794 aa20.73■□□□□ 0.91
NUP50-218ENST00000493456 TGS1Q96RS0 853 aaKnown RBP20.73■□□□□ 0.91
NUP50-218ENST00000493456 FGAP02671 866 aa20.72■□□□□ 0.91
NUP50-218ENST00000493456 CKBP12277 381 aa20.72■□□□□ 0.91
NUP50-218ENST00000493456 ERVK-21P61565 698 aa20.72■□□□□ 0.91
NUP50-218ENST00000493456 ARHGAP1Q07960 439 aa20.72■□□□□ 0.91
NUP50-218ENST00000493456 DGKDQ16760 1214 aa20.72■□□□□ 0.91
NUP50-218ENST00000493456 USH1GQ495M9 461 aa20.72■□□□□ 0.91
NUP50-218ENST00000493456 NSUN6Q8TEA1 469 aaKnown RBP20.72■□□□□ 0.91
NUP50-218ENST00000493456 DHX38Q92620 1227 aaKnown RBP20.72■□□□□ 0.91
NUP50-218ENST00000493456 KAT2BQ92831 832 aa20.72■□□□□ 0.91
NUP50-218ENST00000493456 KATNAL1Q9BW62 490 aa20.72■□□□□ 0.91
NUP50-218ENST00000493456 C11orf16Q9NQ32 467 aa20.72■□□□□ 0.91
NUP50-218ENST00000493456 GTF2IRD1Q9UHL9 959 aa20.72■□□□□ 0.91
NUP50-218ENST00000493456 SALL3Q9BXA9 1300 aa20.72■□□□□ 0.91
NUP50-218ENST00000493456 TRIP12Q14669 1992 aaPredicted RBP20.72■□□□□ 0.91
NUP50-218ENST00000493456 PI4K2BG5E9Z4 385 aa20.71■□□□□ 0.91
NUP50-218ENST00000493456 NBNO60934 754 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms