RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 USP8P40818 1118 aa4.74□□□□□ -1.65
BRCA1-220ENST00000492859 STAT1P42224 750 aa4.74□□□□□ -1.65
BRCA1-220ENST00000492859 TNNT3P45378 269 aaPredicted RBP4.74□□□□□ -1.65
BRCA1-220ENST00000492859 PHKA1P46020 1223 aa4.74□□□□□ -1.65
BRCA1-220ENST00000492859 KCNJ4P48050 445 aa4.74□□□□□ -1.65
BRCA1-220ENST00000492859 AK2P54819 239 aa4.74□□□□□ -1.65
BRCA1-220ENST00000492859 SIK1P57059 783 aa4.74□□□□□ -1.65
BRCA1-220ENST00000492859 C21orf58P58505 322 aa4.74□□□□□ -1.65
BRCA1-220ENST00000492859 GUCA2AQ02747 115 aa4.74□□□□□ -1.65
BRCA1-220ENST00000492859 ADCY2Q08462 1091 aa4.74□□□□□ -1.65
BRCA1-220ENST00000492859 CCDC173Q0VFZ6 552 aa4.74□□□□□ -1.65
BRCA1-220ENST00000492859 AP3B2Q13367 1082 aa4.74□□□□□ -1.65
BRCA1-220ENST00000492859 NAA30Q147X3 362 aaPredicted RBP4.74□□□□□ -1.65
BRCA1-220ENST00000492859 SYCP1Q15431 976 aa4.74□□□□□ -1.65
BRCA1-220ENST00000492859 DDR2Q16832 855 aa4.74□□□□□ -1.65
BRCA1-220ENST00000492859 GNPTABQ3T906 1256 aa4.74□□□□□ -1.65
BRCA1-220ENST00000492859 MORN1Q5T089 497 aa4.74□□□□□ -1.65
BRCA1-220ENST00000492859 AKNAD1Q5T1N1 836 aa4.74□□□□□ -1.65
BRCA1-220ENST00000492859 MEI1Q5TIA1 1274 aa4.74□□□□□ -1.65
BRCA1-220ENST00000492859 RNF19BQ6ZMZ0 732 aa4.74□□□□□ -1.65
BRCA1-220ENST00000492859 LIAT1Q6ZQX7 453 aa4.74□□□□□ -1.65
BRCA1-220ENST00000492859 NECAB2Q7Z6G3 386 aa4.74□□□□□ -1.65
BRCA1-220ENST00000492859 SLC9B2Q86UD5 537 aa4.74□□□□□ -1.65
BRCA1-220ENST00000492859 SPATA2LQ8IUW3 424 aaPredicted RBP4.74□□□□□ -1.65
BRCA1-220ENST00000492859 LURAP1LQ8IV03 231 aa4.74□□□□□ -1.65
BRCA1-220ENST00000492859 TRMT2AQ8IZ69 625 aaKnown RBP4.74□□□□□ -1.65
BRCA1-220ENST00000492859 CBARPQ8N350 705 aaPredicted RBP4.74□□□□□ -1.65
BRCA1-220ENST00000492859 SPERTQ8NA61 448 aa4.74□□□□□ -1.65
BRCA1-220ENST00000492859 SPATA5Q8NB90 893 aa4.74□□□□□ -1.65
BRCA1-220ENST00000492859 ADAMTS18Q8TE60 1221 aa4.74□□□□□ -1.65
BRCA1-220ENST00000492859 C8orf76Q96K31 380 aa4.74□□□□□ -1.65
BRCA1-220ENST00000492859 COG8Q96MW5 612 aa4.74□□□□□ -1.65
BRCA1-220ENST00000492859 PLEKHG4BQ96PX9 1271 aa4.74□□□□□ -1.65
BRCA1-220ENST00000492859 SLC26A8Q96RN1 970 aa4.74□□□□□ -1.65
BRCA1-220ENST00000492859 RMDN3Q96TC7 470 aa4.74□□□□□ -1.65
BRCA1-220ENST00000492859 ADPGKQ9BRR6 497 aa4.74□□□□□ -1.65
BRCA1-220ENST00000492859 CRB3Q9BUF7 120 aa4.74□□□□□ -1.65
BRCA1-220ENST00000492859 SLC26A6Q9BXS9 759 aa4.74□□□□□ -1.65
BRCA1-220ENST00000492859 CFDP1Q9UEE9 299 aaPredicted RBP4.74□□□□□ -1.65
BRCA1-220ENST00000492859 SH3BGRL2Q9UJC5 107 aa4.74□□□□□ -1.65
BRCA1-220ENST00000492859 TRAF3IP3Q9Y228 551 aa4.74□□□□□ -1.65
BRCA1-220ENST00000492859 CRYL1Q9Y2S2 319 aa4.74□□□□□ -1.65
BRCA1-220ENST00000492859 SOS1Q07889 1333 aaPredicted RBP4.74□□□□□ -1.65
BRCA1-220ENST00000492859 FRMPD2Q68DX3 1309 aaPredicted RBP4.74□□□□□ -1.65
BRCA1-220ENST00000492859 KDM2BQ8NHM5 1336 aa4.74□□□□□ -1.65
BRCA1-220ENST00000492859 ARPC4-TTLL3A0A0A6YYG9 625 aa4.74□□□□□ -1.65
BRCA1-220ENST00000492859 FSD2A1L4K1 749 aa4.74□□□□□ -1.65
BRCA1-220ENST00000492859 PHF20L1A8MW92 1017 aa4.74□□□□□ -1.65
BRCA1-220ENST00000492859 EIF3FO00303 357 aaPredicted RBP4.74□□□□□ -1.65
BRCA1-220ENST00000492859 SMAD7O15105 426 aaKnown RBP4.74□□□□□ -1.65
BRCA1-220ENST00000492859 ZBTB14O43829 449 aa4.74□□□□□ -1.65
BRCA1-220ENST00000492859 BRINP1O60477 761 aa4.74□□□□□ -1.65
BRCA1-220ENST00000492859 STAM2O75886 525 aa4.74□□□□□ -1.65
BRCA1-220ENST00000492859 DGKIO75912 1065 aa4.74□□□□□ -1.65
BRCA1-220ENST00000492859 CSPG5O95196 566 aa4.74□□□□□ -1.65
BRCA1-220ENST00000492859 ALAS1P13196 640 aa4.74□□□□□ -1.65
BRCA1-220ENST00000492859 CD46P15529 392 aa4.74□□□□□ -1.65
BRCA1-220ENST00000492859 NOP2P46087 812 aaKnown RBP4.74□□□□□ -1.65
BRCA1-220ENST00000492859 POLD2P49005 469 aa4.74□□□□□ -1.65
BRCA1-220ENST00000492859 IRX1P78414 480 aaPredicted RBP4.74□□□□□ -1.65
BRCA1-220ENST00000492859 PPP2R3AQ06190 1150 aa4.74□□□□□ -1.65
BRCA1-220ENST00000492859 AP1B1Q10567 949 aa4.74□□□□□ -1.65
BRCA1-220ENST00000492859 FKBP5Q13451 457 aaPredicted RBP4.74□□□□□ -1.65
BRCA1-220ENST00000492859 SMAD4Q13485 552 aaKnown RBP4.74□□□□□ -1.65
BRCA1-220ENST00000492859 PPA1Q15181 289 aa4.74□□□□□ -1.65
BRCA1-220ENST00000492859 OASLQ15646 514 aaKnown RBP4.74□□□□□ -1.65
BRCA1-220ENST00000492859 CLUL1Q15846 466 aa4.74□□□□□ -1.65
BRCA1-220ENST00000492859 MINDY4Q4G0A6 757 aa4.74□□□□□ -1.65
BRCA1-220ENST00000492859 GPR158Q5T848 1215 aa4.74□□□□□ -1.65
BRCA1-220ENST00000492859 DSTYKQ6XUX3 929 aa4.74□□□□□ -1.65
BRCA1-220ENST00000492859 FAM47EQ6ZV65 393 aa4.74□□□□□ -1.65
BRCA1-220ENST00000492859 NLRP10Q86W26 655 aa4.74□□□□□ -1.65
BRCA1-220ENST00000492859 VSIG1Q86XK7 387 aa4.74□□□□□ -1.65
BRCA1-220ENST00000492859 NUTM1Q86Y26 1132 aa4.74□□□□□ -1.65
BRCA1-220ENST00000492859 TRIM42Q8IWZ5 723 aa4.74□□□□□ -1.65
BRCA1-220ENST00000492859 ZNF619Q8N2I2 560 aa4.74□□□□□ -1.65
BRCA1-220ENST00000492859 AFAP1Q8N556 730 aa4.74□□□□□ -1.65
BRCA1-220ENST00000492859 FAM160A2Q8N612 972 aaPredicted RBP4.74□□□□□ -1.65
BRCA1-220ENST00000492859 ZNF280CQ8ND82 737 aa4.74□□□□□ -1.65
BRCA1-220ENST00000492859 PNMA1Q8ND90 353 aa4.74□□□□□ -1.65
BRCA1-220ENST00000492859 CCDC148Q8NFR7 591 aa4.74□□□□□ -1.65
BRCA1-220ENST00000492859 ALKBH8Q96BT7 664 aaKnown RBP4.74□□□□□ -1.65
BRCA1-220ENST00000492859 KIF1BPQ96EK5 621 aa4.74□□□□□ -1.65
BRCA1-220ENST00000492859 CCDC114Q96M63 670 aa4.74□□□□□ -1.65
BRCA1-220ENST00000492859 JAKMIP1Q96N16 626 aaKnown RBP4.74□□□□□ -1.65
BRCA1-220ENST00000492859 SEC62Q99442 399 aaKnown RBP4.74□□□□□ -1.65
BRCA1-220ENST00000492859 MYD88Q99836 296 aa4.74□□□□□ -1.65
BRCA1-220ENST00000492859 SPON2Q9BUD6 331 aa4.74□□□□□ -1.65
BRCA1-220ENST00000492859 ISCA1Q9BUE6 129 aa4.74□□□□□ -1.65
BRCA1-220ENST00000492859 NIF3L1Q9GZT8 377 aa4.74□□□□□ -1.65
BRCA1-220ENST00000492859 SLC12A5Q9H2X9 1139 aa4.74□□□□□ -1.65
BRCA1-220ENST00000492859 ZBTB3Q9H5J0 574 aa4.74□□□□□ -1.65
BRCA1-220ENST00000492859 VCPKMTQ9H867 229 aa4.74□□□□□ -1.65
BRCA1-220ENST00000492859 OSGEPQ9NPF4 335 aa4.74□□□□□ -1.65
BRCA1-220ENST00000492859 ANLNQ9NQW6 1124 aa4.74□□□□□ -1.65
BRCA1-220ENST00000492859 MAN1C1Q9NR34 630 aa4.74□□□□□ -1.65
BRCA1-220ENST00000492859 TRMT13Q9NUP7 481 aaKnown RBP4.74□□□□□ -1.65
BRCA1-220ENST00000492859 DNAAF2Q9NVR5 837 aaKnown RBP4.74□□□□□ -1.65
BRCA1-220ENST00000492859 TRHDEQ9UKU6 1024 aa4.74□□□□□ -1.65
BRCA1-220ENST00000492859 ZBTB21Q9ULJ3 1066 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms