RNA–Protein interactions for RNA: ENST00000492626.5

SNX13-209, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,956 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-209ENST00000492626 RGPD8O14715 1765 aaPredicted RBP3.94□□□□□ -1.78
SNX13-209ENST00000492626 RGPD5Q99666 1765 aa3.94□□□□□ -1.78
SNX13-209ENST00000492626 BRCA1P38398 1863 aaKnown RBP3.94□□□□□ -1.78
SNX13-209ENST00000492626 SPATA31E1Q6ZUB1 1445 aa3.94□□□□□ -1.78
SNX13-209ENST00000492626 AQP7O14520 342 aa3.94□□□□□ -1.78
SNX13-209ENST00000492626 LRIG2O94898 1065 aa3.94□□□□□ -1.78
SNX13-209ENST00000492626 SNRPB2P08579 225 aaKnown RBP3.94□□□□□ -1.78
SNX13-209ENST00000492626 SNRPBP14678 240 aaKnown RBP3.94□□□□□ -1.78
SNX13-209ENST00000492626 LTKP29376 864 aa3.94□□□□□ -1.78
SNX13-209ENST00000492626 EVA1CP58658 441 aa3.94□□□□□ -1.78
SNX13-209ENST00000492626 PPP2R5AQ15172 486 aa3.94□□□□□ -1.78
SNX13-209ENST00000492626 IER2Q9BTL4 223 aa3.94□□□□□ -1.78
SNX13-209ENST00000492626 CEP41Q9BYV8 373 aa3.94□□□□□ -1.78
SNX13-209ENST00000492626 NXF1Q9UBU9 619 aaKnown RBP3.94□□□□□ -1.78
SNX13-209ENST00000492626 PCOLCE2Q9UKZ9 415 aa3.94□□□□□ -1.78
SNX13-209ENST00000492626 HCN2Q9UL51 889 aa3.94□□□□□ -1.78
SNX13-209ENST00000492626 A0A1W2PQU0 124 aa3.94□□□□□ -1.78
SNX13-209ENST00000492626 GOLGA6CA6NDK9 693 aa3.94□□□□□ -1.78
SNX13-209ENST00000492626 GOLGA6BA6NDN3 693 aa3.94□□□□□ -1.78
SNX13-209ENST00000492626 TMPRSS2O15393 492 aa3.94□□□□□ -1.78
SNX13-209ENST00000492626 DDX3YO15523 660 aaKnown RBP3.94□□□□□ -1.78
SNX13-209ENST00000492626 ADCY3O60266 1144 aa3.94□□□□□ -1.78
SNX13-209ENST00000492626 GOLGA6DP0CG33 693 aa3.94□□□□□ -1.78
SNX13-209ENST00000492626 OCRLQ01968 901 aa3.94□□□□□ -1.78
SNX13-209ENST00000492626 PPP2R5DQ14738 602 aa3.94□□□□□ -1.78
SNX13-209ENST00000492626 Q6ZNB5 142 aa3.94□□□□□ -1.78
SNX13-209ENST00000492626 COL25A1Q9BXS0 654 aaPredicted RBP3.94□□□□□ -1.78
SNX13-209ENST00000492626 KLHL25Q9H0H3 589 aa3.94□□□□□ -1.78
SNX13-209ENST00000492626 CABP5Q9NP86 173 aa3.94□□□□□ -1.78
SNX13-209ENST00000492626 AASDHPPTQ9NRN7 309 aa3.94□□□□□ -1.78
SNX13-209ENST00000492626 GOLGA6AQ9NYA3 693 aa3.94□□□□□ -1.78
SNX13-209ENST00000492626 CRIM1Q9NZV1 1036 aa3.94□□□□□ -1.78
SNX13-209ENST00000492626 FAM208AQ9UK61 1670 aaKnown RBP3.94□□□□□ -1.78
SNX13-209ENST00000492626 SSC5DA1L4H1 1573 aa3.94□□□□□ -1.78
SNX13-209ENST00000492626 SSU72P8A0A1W2PR75 194 aa3.94□□□□□ -1.78
SNX13-209ENST00000492626 TPD52L2O43399 206 aaKnown RBP3.94□□□□□ -1.78
SNX13-209ENST00000492626 KPNA6O60684 536 aa3.94□□□□□ -1.78
SNX13-209ENST00000492626 ITIH2P19823 946 aa3.94□□□□□ -1.78
SNX13-209ENST00000492626 RAB6AP20340 208 aa3.94□□□□□ -1.78
SNX13-209ENST00000492626 PLA2G5P39877 138 aa3.94□□□□□ -1.78
SNX13-209ENST00000492626 SETDB1Q15047 1291 aa3.94□□□□□ -1.78
SNX13-209ENST00000492626 ANKRD34AQ69YU3 496 aa3.94□□□□□ -1.78
SNX13-209ENST00000492626 ARMCX6Q7L4S7 300 aa3.94□□□□□ -1.78
SNX13-209ENST00000492626 MTDHQ86UE4 582 aaKnown RBP3.94□□□□□ -1.78
SNX13-209ENST00000492626 RPUSD2Q8IZ73 545 aaKnown RBP3.94□□□□□ -1.78
SNX13-209ENST00000492626 KLHL6Q8WZ60 621 aa3.94□□□□□ -1.78
SNX13-209ENST00000492626 CACNA2D2Q9NY47 1150 aa3.94□□□□□ -1.78
SNX13-209ENST00000492626 DIS3Q9Y2L1 958 aaKnown RBP3.94□□□□□ -1.78
SNX13-209ENST00000492626 SCN4AP35499 1836 aa3.93□□□□□ -1.78
SNX13-209ENST00000492626 TUBGCP6Q96RT7 1819 aa3.93□□□□□ -1.78
SNX13-209ENST00000492626 ASLP04424 464 aa3.93□□□□□ -1.78
SNX13-209ENST00000492626 ECI1P42126 302 aa3.93□□□□□ -1.78
SNX13-209ENST00000492626 POU4F1Q01851 419 aa3.93□□□□□ -1.78
SNX13-209ENST00000492626 MAP2K1Q02750 393 aaPredicted RBP3.93□□□□□ -1.78
SNX13-209ENST00000492626 AUHQ13825 339 aaKnown RBP3.93□□□□□ -1.78
SNX13-209ENST00000492626 RNF219Q5W0B1 726 aaPredicted RBP3.93□□□□□ -1.78
SNX13-209ENST00000492626 DCAF15Q66K64 600 aa3.93□□□□□ -1.78
SNX13-209ENST00000492626 IQSEC1Q6DN90 963 aa3.93□□□□□ -1.78
SNX13-209ENST00000492626 EP400NLQ6ZTU2 488 aa3.93□□□□□ -1.78
SNX13-209ENST00000492626 PANK1Q8TE04 598 aa3.93□□□□□ -1.78
SNX13-209ENST00000492626 WDR89Q96FK6 387 aaPredicted RBP3.93□□□□□ -1.78
SNX13-209ENST00000492626 ZDHHC15Q96MV8 337 aa3.93□□□□□ -1.78
SNX13-209ENST00000492626 MRPL18Q9H0U6 180 aaKnown RBP3.93□□□□□ -1.78
SNX13-209ENST00000492626 KLF15Q9UIH9 416 aa3.93□□□□□ -1.78
SNX13-209ENST00000492626 DAGLAQ9Y4D2 1042 aa3.93□□□□□ -1.78
SNX13-209ENST00000492626 CNTNAP1P78357 1384 aa3.93□□□□□ -1.78
SNX13-209ENST00000492626 NRXN1Q9ULB1 1477 aa3.93□□□□□ -1.78
SNX13-209ENST00000492626 DLL1O00548 723 aa3.93□□□□□ -1.78
SNX13-209ENST00000492626 ALDH1L1O75891 902 aa3.93□□□□□ -1.78
SNX13-209ENST00000492626 NPTXRO95502 500 aa3.93□□□□□ -1.78
SNX13-209ENST00000492626 ADH5P11766 374 aa3.93□□□□□ -1.78
SNX13-209ENST00000492626 IGFALSP35858 605 aa3.93□□□□□ -1.78
SNX13-209ENST00000492626 GUCY1A3Q02108 690 aa3.93□□□□□ -1.78
SNX13-209ENST00000492626 SOX4Q06945 474 aaPredicted RBP3.93□□□□□ -1.78
SNX13-209ENST00000492626 BRDTQ58F21 947 aaPredicted RBP3.93□□□□□ -1.78
SNX13-209ENST00000492626 ARHGAP27Q6ZUM4 889 aa3.93□□□□□ -1.78
SNX13-209ENST00000492626 THNSL2Q86YJ6 484 aa3.93□□□□□ -1.78
SNX13-209ENST00000492626 EXOC2Q96KP1 924 aa3.93□□□□□ -1.78
SNX13-209ENST00000492626 TARS2Q9BW92 718 aaKnown RBP3.93□□□□□ -1.78
SNX13-209ENST00000492626 ASPNQ9BXN1 380 aa3.93□□□□□ -1.78
SNX13-209ENST00000492626 SLC5A4Q9NY91 659 aa3.93□□□□□ -1.78
SNX13-209ENST00000492626 EIF5BO60841 1220 aaKnown RBP3.93□□□□□ -1.78
SNX13-209ENST00000492626 GAS7O60861 476 aa3.93□□□□□ -1.78
SNX13-209ENST00000492626 CAND2O75155 1236 aa3.93□□□□□ -1.78
SNX13-209ENST00000492626 ADAMTS2O95450 1211 aa3.93□□□□□ -1.78
SNX13-209ENST00000492626 CBX2Q14781 532 aaPredicted RBP3.93□□□□□ -1.78
SNX13-209ENST00000492626 GPR162Q16538 588 aa3.93□□□□□ -1.78
SNX13-209ENST00000492626 MAMDC2Q7Z304 686 aaPredicted RBP3.93□□□□□ -1.78
SNX13-209ENST00000492626 BRAPQ7Z569 592 aa3.93□□□□□ -1.78
SNX13-209ENST00000492626 JAMLQ86YT9 394 aa3.93□□□□□ -1.78
SNX13-209ENST00000492626 PASD1Q8IV76 773 aa3.93□□□□□ -1.78
SNX13-209ENST00000492626 KSR1Q8IVT5 923 aa3.93□□□□□ -1.78
SNX13-209ENST00000492626 NPAS3Q8IXF0 933 aa3.93□□□□□ -1.78
SNX13-209ENST00000492626 C16orf71Q8IYS4 520 aaPredicted RBP3.93□□□□□ -1.78
SNX13-209ENST00000492626 UBASH3BQ8TF42 649 aa3.93□□□□□ -1.78
SNX13-209ENST00000492626 WNK4Q96J92 1243 aa3.93□□□□□ -1.78
SNX13-209ENST00000492626 BTBD6Q96KE9 485 aa3.93□□□□□ -1.78
SNX13-209ENST00000492626 ALG1Q9BT22 464 aa3.93□□□□□ -1.78
SNX13-209ENST00000492626 ARHGEF4Q9NR80 690 aa3.93□□□□□ -1.78
SNX13-209ENST00000492626 DICER1Q9UPY3 1922 aaKnown RBP3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms