RNA–Protein interactions for RNA: ENST00000492462.1

MDC1-207, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-207ENST00000492462 GRIN2DO15399 1336 aa13.69□□□□□ -0.22
MDC1-207ENST00000492462 LAMA2P24043 3122 aaKnown RBP13.69□□□□□ -0.22
MDC1-207ENST00000492462 LOC102724159A0A0B4J2E5 919 aa13.69□□□□□ -0.22
MDC1-207ENST00000492462 ARIH2O95376 493 aa13.69□□□□□ -0.22
MDC1-207ENST00000492462 PLEKHA8P1O95397 391 aa13.69□□□□□ -0.22
MDC1-207ENST00000492462 CFBP00751 764 aa13.69□□□□□ -0.22
MDC1-207ENST00000492462 CLTBP09497 229 aa13.69□□□□□ -0.22
MDC1-207ENST00000492462 HOXA13P31271 388 aaPredicted RBP13.69□□□□□ -0.22
MDC1-207ENST00000492462 CDK7P50613 346 aa13.69□□□□□ -0.22
MDC1-207ENST00000492462 FAAP100Q0VG06 881 aa13.69□□□□□ -0.22
MDC1-207ENST00000492462 PWP2Q15269 919 aaKnown RBP13.69□□□□□ -0.22
MDC1-207ENST00000492462 ADCK5Q3MIX3 580 aa13.69□□□□□ -0.22
MDC1-207ENST00000492462 LRIT3Q3SXY7 679 aa13.69□□□□□ -0.22
MDC1-207ENST00000492462 CASC1Q6TDU7 716 aa13.69□□□□□ -0.22
MDC1-207ENST00000492462 ANKRD33Q7Z3H0 272 aa13.69□□□□□ -0.22
MDC1-207ENST00000492462 MCF2L2Q86YR7 1114 aa13.69□□□□□ -0.22
MDC1-207ENST00000492462 TDHQ8IZJ6 230 aa13.69□□□□□ -0.22
MDC1-207ENST00000492462 VTI1AQ96AJ9 217 aa13.69□□□□□ -0.22
MDC1-207ENST00000492462 TCEANC2Q96MN5 208 aa13.69□□□□□ -0.22
MDC1-207ENST00000492462 RMDN3Q96TC7 470 aa13.69□□□□□ -0.22
MDC1-207ENST00000492462 AP5M1Q9H0R1 490 aa13.69□□□□□ -0.22
MDC1-207ENST00000492462 PCDHA1Q9Y5I3 950 aa13.69□□□□□ -0.22
MDC1-207ENST00000492462 ELP1O95163 1332 aa13.68□□□□□ -0.22
MDC1-207ENST00000492462 KIAA0355O15063 1070 aa13.68□□□□□ -0.22
MDC1-207ENST00000492462 DDAH1O94760 285 aa13.68□□□□□ -0.22
MDC1-207ENST00000492462 EIF2AK2P19525 551 aaKnown RBP13.68□□□□□ -0.22
MDC1-207ENST00000492462 HSD17B4P51659 736 aa13.68□□□□□ -0.22
MDC1-207ENST00000492462 PSMC6P62333 389 aa13.68□□□□□ -0.22
MDC1-207ENST00000492462 NFXL1Q6ZNB6 911 aa13.68□□□□□ -0.22
MDC1-207ENST00000492462 CMTR1Q8N1G2 835 aaKnown RBP13.68□□□□□ -0.22
MDC1-207ENST00000492462 NSUN6Q8TEA1 469 aaKnown RBP13.68□□□□□ -0.22
MDC1-207ENST00000492462 TMEM87BQ96K49 555 aa13.68□□□□□ -0.22
MDC1-207ENST00000492462 TMEM39AQ9NV64 488 aa13.68□□□□□ -0.22
MDC1-207ENST00000492462 PNMA6FA0A0J9YX94 578 aa13.67□□□□□ -0.22
MDC1-207ENST00000492462 A0A0U1RQG5 324 aaPredicted RBP13.67□□□□□ -0.22
MDC1-207ENST00000492462 CCDC69A6NI79 296 aa13.67□□□□□ -0.22
MDC1-207ENST00000492462 ARVCFO00192 962 aa13.67□□□□□ -0.22
MDC1-207ENST00000492462 NEFLP07196 543 aa13.67□□□□□ -0.22
MDC1-207ENST00000492462 EPHB4P54760 987 aa13.67□□□□□ -0.22
MDC1-207ENST00000492462 GHRHRQ02643 423 aa13.67□□□□□ -0.22
MDC1-207ENST00000492462 C9orf50Q5SZB4 431 aa13.67□□□□□ -0.22
MDC1-207ENST00000492462 SEPT14Q6ZU15 432 aa13.67□□□□□ -0.22
MDC1-207ENST00000492462 SCFD2Q8WU76 684 aa13.67□□□□□ -0.22
MDC1-207ENST00000492462 PPP1R13LQ8WUF5 828 aa13.67□□□□□ -0.22
MDC1-207ENST00000492462 ZFP91Q96JP5 570 aaPredicted RBP13.67□□□□□ -0.22
MDC1-207ENST00000492462 TOX2Q96NM4 488 aa13.67□□□□□ -0.22
MDC1-207ENST00000492462 NEK1Q96PY6 1258 aa13.67□□□□□ -0.22
MDC1-207ENST00000492462 MTA3Q9BTC8 594 aa13.67□□□□□ -0.22
MDC1-207ENST00000492462 PXMP2Q9NR77 195 aa13.67□□□□□ -0.22
MDC1-207ENST00000492462 TBX21Q9UL17 535 aa13.67□□□□□ -0.22
MDC1-207ENST00000492462 Q9Y3F1 56 aa13.67□□□□□ -0.22
MDC1-207ENST00000492462 DCDC2CA8MYV0 355 aa13.66□□□□□ -0.22
MDC1-207ENST00000492462 TXNP10599 105 aaKnown RBP13.66□□□□□ -0.22
MDC1-207ENST00000492462 LIFRP42702 1097 aa13.66□□□□□ -0.22
MDC1-207ENST00000492462 EXOSC10Q01780 885 aaKnown RBP13.66□□□□□ -0.22
MDC1-207ENST00000492462 PPP2R5BQ15173 497 aa13.66□□□□□ -0.22
MDC1-207ENST00000492462 SHHQ15465 462 aa13.66□□□□□ -0.22
MDC1-207ENST00000492462 RNF20Q5VTR2 975 aa13.66□□□□□ -0.22
MDC1-207ENST00000492462 ARHGEF16Q5VV41 709 aa13.66□□□□□ -0.22
MDC1-207ENST00000492462 CCDC62Q6P9F0 684 aa13.66□□□□□ -0.22
MDC1-207ENST00000492462 FAM126BQ8IXS8 530 aa13.66□□□□□ -0.22
MDC1-207ENST00000492462 SRBD1Q8N5C6 995 aaKnown RBP13.66□□□□□ -0.22
MDC1-207ENST00000492462 OR6J1Q8NGC5 347 aa13.66□□□□□ -0.22
MDC1-207ENST00000492462 IL31RAQ8NI17 732 aa13.66□□□□□ -0.22
MDC1-207ENST00000492462 CTCFLQ8NI51 663 aaPredicted RBP13.66□□□□□ -0.22
MDC1-207ENST00000492462 GUCD1Q96NT3 240 aa13.66□□□□□ -0.22
MDC1-207ENST00000492462 MPHOSPH6Q99547 160 aaKnown RBP13.66□□□□□ -0.22
MDC1-207ENST00000492462 MAP3K14Q99558 947 aa13.66□□□□□ -0.22
MDC1-207ENST00000492462 MAF1Q9H063 256 aa13.66□□□□□ -0.22
MDC1-207ENST00000492462 MYH7BA7E2Y1 1941 aa13.66□□□□□ -0.22
MDC1-207ENST00000492462 hCG_1642624A0A1W2PR95 340 aa13.65□□□□□ -0.22
MDC1-207ENST00000492462 NR3C2P08235 984 aa13.65□□□□□ -0.22
MDC1-207ENST00000492462 MYL3P08590 195 aa13.65□□□□□ -0.22
MDC1-207ENST00000492462 CPA1P15085 419 aa13.65□□□□□ -0.22
MDC1-207ENST00000492462 RAG1P15918 1043 aa13.65□□□□□ -0.22
MDC1-207ENST00000492462 KIF5BP33176 963 aa13.65□□□□□ -0.22
MDC1-207ENST00000492462 ITGA7Q13683 1181 aa13.65□□□□□ -0.22
MDC1-207ENST00000492462 STXBP2Q15833 593 aa13.65□□□□□ -0.22
MDC1-207ENST00000492462 LY6KQ17RY6 165 aa13.65□□□□□ -0.22
MDC1-207ENST00000492462 FCHSD1Q86WN1 690 aa13.65□□□□□ -0.22
MDC1-207ENST00000492462 SLC43A3Q8NBI5 491 aa13.65□□□□□ -0.22
MDC1-207ENST00000492462 SYMPKQ92797 1274 aaKnown RBP13.65□□□□□ -0.22
MDC1-207ENST00000492462 IWS1Q96ST2 819 aa13.65□□□□□ -0.22
MDC1-207ENST00000492462 PDCD2LQ9BRP1 358 aa13.65□□□□□ -0.22
MDC1-207ENST00000492462 SPZ1Q9BXG8 430 aa13.65□□□□□ -0.22
MDC1-207ENST00000492462 BRPF3Q9ULD4 1205 aa13.65□□□□□ -0.22
MDC1-207ENST00000492462 SLC12A7Q9Y666 1083 aa13.65□□□□□ -0.22
MDC1-207ENST00000492462 SCN10AQ9Y5Y9 1956 aa13.65□□□□□ -0.22
MDC1-207ENST00000492462 B4DLN1 442 aa13.64□□□□□ -0.23
MDC1-207ENST00000492462 GCOM1H8Y6P7 765 aaPredicted RBP13.64□□□□□ -0.23
MDC1-207ENST00000492462 CABYRO75952 493 aa13.64□□□□□ -0.23
MDC1-207ENST00000492462 RGS20O76081 388 aa13.64□□□□□ -0.23
MDC1-207ENST00000492462 CD4P01730 458 aa13.64□□□□□ -0.23
MDC1-207ENST00000492462 POLR2MP0CAP2 368 aa13.64□□□□□ -0.23
MDC1-207ENST00000492462 MYCLP12524 364 aaPredicted RBP13.64□□□□□ -0.23
MDC1-207ENST00000492462 MRPL12P52815 198 aaKnown RBP13.64□□□□□ -0.23
MDC1-207ENST00000492462 PURAQ00577 322 aaKnown RBP13.64□□□□□ -0.23
MDC1-207ENST00000492462 TTLL4Q14679 1199 aa13.64□□□□□ -0.23
MDC1-207ENST00000492462 TSGA10IPQ3SY00 556 aa13.64□□□□□ -0.23
MDC1-207ENST00000492462 DHX32Q7L7V1 743 aaKnown RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms