RNA–Protein interactions for RNA: ENST00000491421.5

LSM2-213, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 820 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-213ENST00000491421 GRM4Q14833 912 aa9.61□□□□□ -0.87
LSM2-213ENST00000491421 WTAPQ15007 396 aa9.61□□□□□ -0.87
LSM2-213ENST00000491421 TMEM67Q5HYA8 995 aa9.61□□□□□ -0.87
LSM2-213ENST00000491421 ZNF697Q5TEC3 545 aa9.61□□□□□ -0.87
LSM2-213ENST00000491421 STOX1Q6ZVD7 989 aa9.61□□□□□ -0.87
LSM2-213ENST00000491421 CHST3Q7LGC8 479 aa9.61□□□□□ -0.87
LSM2-213ENST00000491421 HOMER1Q86YM7 354 aa9.61□□□□□ -0.87
LSM2-213ENST00000491421 TMEM199Q8N511 208 aa9.61□□□□□ -0.87
LSM2-213ENST00000491421 TAAR1Q96RJ0 339 aa9.61□□□□□ -0.87
LSM2-213ENST00000491421 RMDN3Q96TC7 470 aa9.61□□□□□ -0.87
LSM2-213ENST00000491421 SENP2Q9HC62 589 aa9.61□□□□□ -0.87
LSM2-213ENST00000491421 GPHNQ9NQX3 736 aaPredicted RBP9.61□□□□□ -0.87
LSM2-213ENST00000491421 COL20A1Q9P218 1284 aa9.61□□□□□ -0.87
LSM2-213ENST00000491421 STXBP5LQ9Y2K9 1186 aa9.61□□□□□ -0.87
LSM2-213ENST00000491421 COL6A3P12111 3177 aa9.61□□□□□ -0.87
LSM2-213ENST00000491421 GRIN2DO15399 1336 aa9.6□□□□□ -0.87
LSM2-213ENST00000491421 PPP1R11O60927 126 aaPredicted RBP9.6□□□□□ -0.87
LSM2-213ENST00000491421 CFBP00751 764 aa9.6□□□□□ -0.87
LSM2-213ENST00000491421 CSF2RAP15509 400 aa9.6□□□□□ -0.87
LSM2-213ENST00000491421 EIF2AK2P19525 551 aaKnown RBP9.6□□□□□ -0.87
LSM2-213ENST00000491421 CYP2C18P33260 490 aa9.6□□□□□ -0.87
LSM2-213ENST00000491421 PURAQ00577 322 aaKnown RBP9.6□□□□□ -0.87
LSM2-213ENST00000491421 CACNB1Q02641 598 aaPredicted RBP9.6□□□□□ -0.87
LSM2-213ENST00000491421 TRAF1Q13077 416 aa9.6□□□□□ -0.87
LSM2-213ENST00000491421 STXBP2Q15833 593 aa9.6□□□□□ -0.87
LSM2-213ENST00000491421 ARHGEF16Q5VV41 709 aa9.6□□□□□ -0.87
LSM2-213ENST00000491421 SEPT14Q6ZU15 432 aa9.6□□□□□ -0.87
LSM2-213ENST00000491421 CATIPQ7Z7H3 387 aa9.6□□□□□ -0.87
LSM2-213ENST00000491421 MB21D2Q8IYB1 491 aaPredicted RBP9.6□□□□□ -0.87
LSM2-213ENST00000491421 COPS5Q92905 334 aa9.6□□□□□ -0.87
LSM2-213ENST00000491421 MTMR8Q96EF0 704 aa9.6□□□□□ -0.87
LSM2-213ENST00000491421 FAM161BQ96MY7 647 aa9.6□□□□□ -0.87
LSM2-213ENST00000491421 IWS1Q96ST2 819 aa9.6□□□□□ -0.87
LSM2-213ENST00000491421 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.6□□□□□ -0.87
LSM2-213ENST00000491421 MTG1Q9BT17 334 aaPredicted RBP9.6□□□□□ -0.87
LSM2-213ENST00000491421 TRPV6Q9H1D0 765 aa9.6□□□□□ -0.87
LSM2-213ENST00000491421 HIPK3Q9H422 1215 aa9.6□□□□□ -0.87
LSM2-213ENST00000491421 PCDHA1Q9Y5I3 950 aa9.6□□□□□ -0.87
LSM2-213ENST00000491421 MCM3APO60318 1980 aa9.6□□□□□ -0.87
LSM2-213ENST00000491421 LCTP09848 1927 aa9.59□□□□□ -0.87
LSM2-213ENST00000491421 A6NJR5 290 aa9.59□□□□□ -0.87
LSM2-213ENST00000491421 OPLAHO14841 1288 aa9.59□□□□□ -0.87
LSM2-213ENST00000491421 B4GALT4O60513 344 aa9.59□□□□□ -0.87
LSM2-213ENST00000491421 KPNA6O60684 536 aa9.59□□□□□ -0.87
LSM2-213ENST00000491421 ARIH2O95376 493 aa9.59□□□□□ -0.87
LSM2-213ENST00000491421 HSD17B4P51659 736 aa9.59□□□□□ -0.87
LSM2-213ENST00000491421 ANTXR2P58335 489 aa9.59□□□□□ -0.87
LSM2-213ENST00000491421 TROAPQ12815 778 aa9.59□□□□□ -0.87
LSM2-213ENST00000491421 TMEM132AQ24JP5 1023 aa9.59□□□□□ -0.87
LSM2-213ENST00000491421 SLC35G1Q2M3R5 365 aa9.59□□□□□ -0.87
LSM2-213ENST00000491421 CCDC62Q6P9F0 684 aa9.59□□□□□ -0.87
LSM2-213ENST00000491421 PSRC1Q6PGN9 363 aaPredicted RBP9.59□□□□□ -0.87
LSM2-213ENST00000491421 CASC1Q6TDU7 716 aa9.59□□□□□ -0.87
LSM2-213ENST00000491421 CENPQQ7L2Z9 268 aaPredicted RBP9.59□□□□□ -0.87
LSM2-213ENST00000491421 IGDCC4Q8TDY8 1250 aa9.59□□□□□ -0.87
LSM2-213ENST00000491421 GUCD1Q96NT3 240 aa9.59□□□□□ -0.87
LSM2-213ENST00000491421 PIGSQ96S52 555 aa9.59□□□□□ -0.87
LSM2-213ENST00000491421 ESYT1Q9BSJ8 1104 aa9.59□□□□□ -0.87
LSM2-213ENST00000491421 LSG1Q9H089 658 aaKnown RBP9.59□□□□□ -0.87
LSM2-213ENST00000491421 ALDH8A1Q9H2A2 487 aaPredicted RBP9.59□□□□□ -0.87
LSM2-213ENST00000491421 PXMP2Q9NR77 195 aa9.59□□□□□ -0.87
LSM2-213ENST00000491421 PNMA6FA0A0J9YX94 578 aa9.58□□□□□ -0.88
LSM2-213ENST00000491421 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.58□□□□□ -0.88
LSM2-213ENST00000491421 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.58□□□□□ -0.88
LSM2-213ENST00000491421 PRC1O43663 620 aa9.58□□□□□ -0.88
LSM2-213ENST00000491421 EIF3JO75822 258 aaKnown RBP9.58□□□□□ -0.88
LSM2-213ENST00000491421 DDAH1O94760 285 aa9.58□□□□□ -0.88
LSM2-213ENST00000491421 GH1P01241 217 aa9.58□□□□□ -0.88
LSM2-213ENST00000491421 NR3C2P08235 984 aa9.58□□□□□ -0.88
LSM2-213ENST00000491421 SUPT20HL2P0C7V6 817 aa9.58□□□□□ -0.88
LSM2-213ENST00000491421 ACRP10323 421 aa9.58□□□□□ -0.88
LSM2-213ENST00000491421 HOXA13P31271 388 aaPredicted RBP9.58□□□□□ -0.88
LSM2-213ENST00000491421 CCL23P55773 120 aa9.58□□□□□ -0.88
LSM2-213ENST00000491421 GHRHRQ02643 423 aa9.58□□□□□ -0.88
LSM2-213ENST00000491421 LY6KQ17RY6 165 aa9.58□□□□□ -0.88
LSM2-213ENST00000491421 NBPF20Q3BBV1 942 aa9.58□□□□□ -0.88
LSM2-213ENST00000491421 BMP2KLQ5H9B9 411 aa9.58□□□□□ -0.88
LSM2-213ENST00000491421 FAM47CQ5HY64 1035 aa9.58□□□□□ -0.88
LSM2-213ENST00000491421 TMEM240Q5SV17 173 aa9.58□□□□□ -0.88
LSM2-213ENST00000491421 ZNF365Q70YC5 407 aa9.58□□□□□ -0.88
LSM2-213ENST00000491421 C16orf59Q7L2K0 433 aa9.58□□□□□ -0.88
LSM2-213ENST00000491421 SAMD3Q8N6K7 520 aa9.58□□□□□ -0.88
LSM2-213ENST00000491421 SLC17A8Q8NDX2 589 aa9.58□□□□□ -0.88
LSM2-213ENST00000491421 CTCFLQ8NI51 663 aaPredicted RBP9.58□□□□□ -0.88
LSM2-213ENST00000491421 NOC4LQ9BVI4 516 aaKnown RBP9.58□□□□□ -0.88
LSM2-213ENST00000491421 RIOX1Q9H6W3 641 aa9.58□□□□□ -0.88
LSM2-213ENST00000491421 LY9Q9HBG7 655 aa9.58□□□□□ -0.88
LSM2-213ENST00000491421 IL23AQ9NPF7 189 aa9.58□□□□□ -0.88
LSM2-213ENST00000491421 ANO2Q9NQ90 1003 aa9.58□□□□□ -0.88
LSM2-213ENST00000491421 TRMT13Q9NUP7 481 aaKnown RBP9.58□□□□□ -0.88
LSM2-213ENST00000491421 MAP3K20Q9NYL2 800 aaKnown RBP9.58□□□□□ -0.88
LSM2-213ENST00000491421 UMODL1Q5DID0 1318 aa9.57□□□□□ -0.88
LSM2-213ENST00000491421 GCOM1H8Y6P7 765 aaPredicted RBP9.57□□□□□ -0.88
LSM2-213ENST00000491421 SLC27A2O14975 620 aa9.57□□□□□ -0.88
LSM2-213ENST00000491421 CYTH3O43739 400 aa9.57□□□□□ -0.88
LSM2-213ENST00000491421 POLR2MP0CAP2 368 aa9.57□□□□□ -0.88
LSM2-213ENST00000491421 CYP2C9P11712 490 aa9.57□□□□□ -0.88
LSM2-213ENST00000491421 MYCLP12524 364 aaPredicted RBP9.57□□□□□ -0.88
LSM2-213ENST00000491421 KIF5BP33176 963 aa9.57□□□□□ -0.88
LSM2-213ENST00000491421 MCM5P33992 734 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms