RNA–Protein interactions for RNA: ENST00000491142.1

HPS4-215, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-215ENST00000491142 PAG1Q9NWQ8 432 aa10.05□□□□□ -0.8
HPS4-215ENST00000491142 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.05□□□□□ -0.8
HPS4-215ENST00000491142 PCDHA11Q9Y5I1 949 aa10.05□□□□□ -0.8
HPS4-215ENST00000491142 SLC4A7Q9Y6M7 1214 aa10.05□□□□□ -0.8
HPS4-215ENST00000491142 GBF1Q92538 1859 aa10.04□□□□□ -0.8
HPS4-215ENST00000491142 MYH8P13535 1937 aa10.04□□□□□ -0.8
HPS4-215ENST00000491142 BAZ2AQ9UIF9 1905 aaKnown RBP10.04□□□□□ -0.8
HPS4-215ENST00000491142 GOLGA6L3A6NEY3 463 aa10.04□□□□□ -0.8
HPS4-215ENST00000491142 ATP2A1O14983 1001 aa10.04□□□□□ -0.8
HPS4-215ENST00000491142 B4GALT4O60513 344 aa10.04□□□□□ -0.8
HPS4-215ENST00000491142 ZBED4O75132 1171 aa10.04□□□□□ -0.8
HPS4-215ENST00000491142 NDUFB10O96000 172 aa10.04□□□□□ -0.8
HPS4-215ENST00000491142 CNTN2Q02246 1040 aa10.04□□□□□ -0.8
HPS4-215ENST00000491142 TNFAIP2Q03169 654 aa10.04□□□□□ -0.8
HPS4-215ENST00000491142 ITGA7Q13683 1181 aa10.04□□□□□ -0.8
HPS4-215ENST00000491142 KRT32Q14532 448 aa10.04□□□□□ -0.8
HPS4-215ENST00000491142 ANKRD1Q15327 319 aa10.04□□□□□ -0.8
HPS4-215ENST00000491142 AAK1Q2M2I8 961 aa10.04□□□□□ -0.8
HPS4-215ENST00000491142 ADCK5Q3MIX3 580 aa10.04□□□□□ -0.8
HPS4-215ENST00000491142 KRT40Q6A162 431 aa10.04□□□□□ -0.8
HPS4-215ENST00000491142 NOL8Q76FK4 1167 aaKnown RBP10.04□□□□□ -0.8
HPS4-215ENST00000491142 ZNF589Q86UQ0 364 aaPredicted RBP10.04□□□□□ -0.8
HPS4-215ENST00000491142 AMOTL1Q8IY63 956 aa10.04□□□□□ -0.8
HPS4-215ENST00000491142 STK11IPQ8N1F8 1099 aa10.04□□□□□ -0.8
HPS4-215ENST00000491142 KIFC2Q96AC6 838 aa10.04□□□□□ -0.8
HPS4-215ENST00000491142 SCLYQ96I15 445 aa10.04□□□□□ -0.8
HPS4-215ENST00000491142 CERS4Q9HA82 394 aa10.04□□□□□ -0.8
HPS4-215ENST00000491142 LMBRD1Q9NUN5 540 aa10.04□□□□□ -0.8
HPS4-215ENST00000491142 MTCH2Q9Y6C9 303 aa10.04□□□□□ -0.8
HPS4-215ENST00000491142 STK24Q9Y6E0 443 aa10.04□□□□□ -0.8
HPS4-215ENST00000491142 SLC4A4Q9Y6R1 1079 aa10.04□□□□□ -0.8
HPS4-215ENST00000491142 DDX49Q9Y6V7 483 aaKnown RBP10.04□□□□□ -0.8
HPS4-215ENST00000491142 EPOPA6NHQ4 379 aa10.03□□□□□ -0.8
HPS4-215ENST00000491142 ZBBXA8MT70 800 aa10.03□□□□□ -0.8
HPS4-215ENST00000491142 TLL1O43897 1013 aa10.03□□□□□ -0.8
HPS4-215ENST00000491142 PDIA4P13667 645 aaKnown RBP10.03□□□□□ -0.8
HPS4-215ENST00000491142 ATP2A2P16615 1042 aaKnown RBP10.03□□□□□ -0.8
HPS4-215ENST00000491142 RPS6KB1P23443 525 aa10.03□□□□□ -0.8
HPS4-215ENST00000491142 PSMC6P62333 389 aa10.03□□□□□ -0.8
HPS4-215ENST00000491142 TTLL4Q14679 1199 aa10.03□□□□□ -0.8
HPS4-215ENST00000491142 LRRFIP1Q32MZ4 808 aaKnown RBP10.03□□□□□ -0.8
HPS4-215ENST00000491142 ZMYM1Q5SVZ6 1142 aa10.03□□□□□ -0.8
HPS4-215ENST00000491142 TMEM63BQ5T3F8 832 aa10.03□□□□□ -0.8
HPS4-215ENST00000491142 MCTP1Q6DN14 999 aa10.03□□□□□ -0.8
HPS4-215ENST00000491142 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.03□□□□□ -0.8
HPS4-215ENST00000491142 KHSRPQ92945 711 aaKnown RBP eCLIP10.03□□□□□ -0.8
HPS4-215ENST00000491142 AGBL1Q96MI9 1066 aa10.03□□□□□ -0.8
HPS4-215ENST00000491142 DSCC1Q9BVC3 393 aa10.03□□□□□ -0.8
HPS4-215ENST00000491142 SLC38A10Q9HBR0 1119 aa10.03□□□□□ -0.8
HPS4-215ENST00000491142 HOMER2Q9NSB8 354 aa10.03□□□□□ -0.8
HPS4-215ENST00000491142 NYAP2Q9P242 653 aa10.03□□□□□ -0.8
HPS4-215ENST00000491142 CLIP2Q9UDT6 1046 aa10.03□□□□□ -0.8
HPS4-215ENST00000491142 GNEQ9Y223 722 aaKnown RBP10.03□□□□□ -0.8
HPS4-215ENST00000491142 CTDP1Q9Y5B0 961 aaPredicted RBP10.03□□□□□ -0.8
HPS4-215ENST00000491142 MCM3APO60318 1980 aa10.03□□□□□ -0.8
HPS4-215ENST00000491142 SOWAHBA6NEL2 793 aa10.02□□□□□ -0.81
HPS4-215ENST00000491142 STK25O00506 426 aa10.02□□□□□ -0.81
HPS4-215ENST00000491142 DYNC1LI2O43237 492 aaPredicted RBP10.02□□□□□ -0.81
HPS4-215ENST00000491142 CABYRO75952 493 aa10.02□□□□□ -0.81
HPS4-215ENST00000491142 CA3P07451 260 aa10.02□□□□□ -0.81
HPS4-215ENST00000491142 SMPD1P17405 629 aa10.02□□□□□ -0.81
HPS4-215ENST00000491142 POU3F3P20264 500 aaPredicted RBP10.02□□□□□ -0.81
HPS4-215ENST00000491142 RASA1P20936 1047 aa10.02□□□□□ -0.81
HPS4-215ENST00000491142 MRE11P49959 708 aa10.02□□□□□ -0.81
HPS4-215ENST00000491142 FSCN1Q16658 493 aaKnown RBP10.02□□□□□ -0.81
HPS4-215ENST00000491142 BLOC1S2Q6QNY1 142 aa10.02□□□□□ -0.81
HPS4-215ENST00000491142 TLK2Q86UE8 772 aa10.02□□□□□ -0.81
HPS4-215ENST00000491142 RPUSD2Q8IZ73 545 aaKnown RBP10.02□□□□□ -0.81
HPS4-215ENST00000491142 FAM133AQ8N9E0 248 aa10.02□□□□□ -0.81
HPS4-215ENST00000491142 CHST13Q8NET6 341 aa10.02□□□□□ -0.81
HPS4-215ENST00000491142 TMEM121BQ9BXQ6 578 aaPredicted RBP10.02□□□□□ -0.81
HPS4-215ENST00000491142 PUS7LQ9H0K6 701 aaKnown RBP10.02□□□□□ -0.81
HPS4-215ENST00000491142 PDGFCQ9NRA1 345 aa10.02□□□□□ -0.81
HPS4-215ENST00000491142 FBXO40Q9UH90 709 aa10.02□□□□□ -0.81
HPS4-215ENST00000491142 HCN4Q9Y3Q4 1203 aa10.02□□□□□ -0.81
HPS4-215ENST00000491142 ARIH1Q9Y4X5 557 aaPredicted RBP10.02□□□□□ -0.81
HPS4-215ENST00000491142 PRRC2BQ5JSZ5 2229 aaKnown RBP10.01□□□□□ -0.81
HPS4-215ENST00000491142 FAM86C2PA6NEL3 165 aa10.01□□□□□ -0.81
HPS4-215ENST00000491142 RNF113AO15541 343 aaKnown RBP10.01□□□□□ -0.81
HPS4-215ENST00000491142 GTPBP6O43824 516 aaPredicted RBP10.01□□□□□ -0.81
HPS4-215ENST00000491142 ARHGEF15O94989 841 aa10.01□□□□□ -0.81
HPS4-215ENST00000491142 ZFYP08048 801 aaPredicted RBP10.01□□□□□ -0.81
HPS4-215ENST00000491142 CYP2C9P11712 490 aa10.01□□□□□ -0.81
HPS4-215ENST00000491142 UBE3CQ15386 1083 aa10.01□□□□□ -0.81
HPS4-215ENST00000491142 TMEM67Q5HYA8 995 aa10.01□□□□□ -0.81
HPS4-215ENST00000491142 TMEM31Q5JXX7 168 aa10.01□□□□□ -0.81
HPS4-215ENST00000491142 EEPD1Q7L9B9 569 aa10.01□□□□□ -0.81
HPS4-215ENST00000491142 DEFB128Q7Z7B8 93 aa10.01□□□□□ -0.81
HPS4-215ENST00000491142 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.01□□□□□ -0.81
HPS4-215ENST00000491142 AP5M1Q9H0R1 490 aa10.01□□□□□ -0.81
HPS4-215ENST00000491142 GZF1Q9H116 711 aaPredicted RBP10.01□□□□□ -0.81
HPS4-215ENST00000491142 MKNK2Q9HBH9 465 aa10.01□□□□□ -0.81
HPS4-215ENST00000491142 C11orf16Q9NQ32 467 aa10.01□□□□□ -0.81
HPS4-215ENST00000491142 A1CFQ9NQ94 594 aaKnown RBP10.01□□□□□ -0.81
HPS4-215ENST00000491142 FEM1BQ9UK73 627 aa10.01□□□□□ -0.81
HPS4-215ENST00000491142 SMC3Q9UQE7 1217 aa10.01□□□□□ -0.81
HPS4-215ENST00000491142 IGKV6D-41A0A0C4DH26 115 aa10□□□□□ -0.81
HPS4-215ENST00000491142 SNPHO15079 494 aa10□□□□□ -0.81
HPS4-215ENST00000491142 LARGE1O95461 756 aa10□□□□□ -0.81
HPS4-215ENST00000491142 MBD3O95983 291 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms